BLASTX nr result

ID: Ophiopogon24_contig00022198 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00022198
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248990.1| transcription initiation factor TFIID subuni...   109   2e-25
gb|ONK56593.1| uncharacterized protein A4U43_C10F10470 [Asparagu...   109   2e-25
ref|XP_010932628.1| PREDICTED: transcription initiation factor T...    59   1e-07
ref|XP_017700196.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    55   4e-06

>ref|XP_020248990.1| transcription initiation factor TFIID subunit 2 [Asparagus
            officinalis]
          Length = 1315

 Score =  109 bits (273), Expect = 2e-25
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = +2

Query: 83   NDPEYLERKRQKKGKKRLERELAKKHKADGRSLENSVKLVAESSKGDPSSEGSKKLQGNA 262
            NDP YLERKRQKK KKRL++      K +G+SL++S+K VAESSKGD SSEGSKKLQG  
Sbjct: 1227 NDPAYLERKRQKKEKKRLKKMEKMMKKGEGKSLDDSMKPVAESSKGDQSSEGSKKLQGKV 1286

Query: 263  EAPNVSKTRETTSGPRLLKIKIKSLGGGNG 352
            E  N+ K +ET+S P+ LKIKI+SLGG NG
Sbjct: 1287 EDHNILKPKETSSAPK-LKIKIRSLGGKNG 1315


>gb|ONK56593.1| uncharacterized protein A4U43_C10F10470 [Asparagus officinalis]
          Length = 1442

 Score =  109 bits (273), Expect = 2e-25
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = +2

Query: 83   NDPEYLERKRQKKGKKRLERELAKKHKADGRSLENSVKLVAESSKGDPSSEGSKKLQGNA 262
            NDP YLERKRQKK KKRL++      K +G+SL++S+K VAESSKGD SSEGSKKLQG  
Sbjct: 1354 NDPAYLERKRQKKEKKRLKKMEKMMKKGEGKSLDDSMKPVAESSKGDQSSEGSKKLQGKV 1413

Query: 263  EAPNVSKTRETTSGPRLLKIKIKSLGGGNG 352
            E  N+ K +ET+S P+ LKIKI+SLGG NG
Sbjct: 1414 EDHNILKPKETSSAPK-LKIKIRSLGGKNG 1442


>ref|XP_010932628.1| PREDICTED: transcription initiation factor TFIID subunit 2 [Elaeis
            guineensis]
          Length = 1351

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
 Frame = +2

Query: 83   NDPEYLERKRQKKGKKRLERELAKKHKAD---GRSLENSVKLVAESSKGDPSSEGSKKLQ 253
            +DPEYLERKR KK KKR+E+ELAK  K +    R L N  K V   S+  P+   SKK +
Sbjct: 1255 DDPEYLERKRLKKEKKRMEKELAKMQKGEERTARDLRNVAKPV--ESQVAPAIGESKKSE 1312

Query: 254  GNAEAPNVSKTRETTSGPR-----LLKIKIKS 334
             + E P+VS +RET+   +      ++IKIKS
Sbjct: 1313 QSVE-PHVSVSRETSENTQSSLAPKVRIKIKS 1343


>ref|XP_017700196.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
            subunit 2 [Phoenix dactylifera]
          Length = 1502

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
 Frame = +2

Query: 83   NDPEYLERKRQKKGKKRLERELAKKHKADGRSLENSVKLVAESSKGDPSSEGSKKLQGNA 262
            +DPEYLERKR KK KKR+E+E AK  K + R+L                + G  K    +
Sbjct: 1405 DDPEYLERKRLKKEKKRMEKESAKIQKGEERTLRGLQNAAKPVESQVALAIGESKKADQS 1464

Query: 263  EAPNVSKTRETT-------SGPRLLKIKIKS 334
               +VSK+RETT       S P+ ++IKIKS
Sbjct: 1465 VDRHVSKSRETTSDNAQSSSAPK-VRIKIKS 1494


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