BLASTX nr result

ID: Ophiopogon24_contig00020283 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00020283
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270695.1| uncharacterized protein LOC109845841 [Aspara...    86   9e-18
ref|XP_020271638.1| uncharacterized protein LOC109846802 [Aspara...    67   2e-10
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    57   9e-07

>ref|XP_020270695.1| uncharacterized protein LOC109845841 [Asparagus officinalis]
          Length = 268

 Score = 86.3 bits (212), Expect = 9e-18
 Identities = 56/126 (44%), Positives = 73/126 (57%)
 Frame = +3

Query: 3   VISRDVTFDEDSMMKPPSSQHAEDIRTEEISQPVEYDVASPSSVRSVSIEVPTDVTLGRD 182
           VISRDVTFDE  MM+    Q  E+ +T  +SQ VE DV   +S  +VSIE PT+VTLG D
Sbjct: 2   VISRDVTFDEAHMMRSQIPQQLEESQTSGVSQQVEEDVTLQTSDSTVSIETPTEVTLGGD 61

Query: 183 QAEDQIIEPTVDQPEVDTEVTAVEQDQGQSVQGSRRQDQGLRVQDSIAANRPKRQIRKPS 362
              D  +E TVD   V T      Q+QG              VQ+SI ANRP+R IR+ +
Sbjct: 62  DMTDGQVEDTVD---VGT------QEQGY-------------VQESITANRPRRSIRRLA 99

Query: 363 RFNDMV 380
           R++D++
Sbjct: 100 RYDDVM 105


>ref|XP_020271638.1| uncharacterized protein LOC109846802 [Asparagus officinalis]
          Length = 290

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 37/72 (51%), Positives = 45/72 (62%)
 Frame = +3

Query: 3   VISRDVTFDEDSMMKPPSSQHAEDIRTEEISQPVEYDVASPSSVRSVSIEVPTDVTLGRD 182
           +ISRDVTFDE  MM+P   Q  E+ +   ISQ VE DV   +S  SVSI+ PT VTLG D
Sbjct: 100 IISRDVTFDEAHMMRPQIPQQVEECQISGISQQVEDDVTLQTSDSSVSIKAPTKVTLGGD 159

Query: 183 QAEDQIIEPTVD 218
              D  ++ TVD
Sbjct: 160 DLTDGQMQDTVD 171


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 44/131 (33%), Positives = 62/131 (47%)
 Frame = +3

Query: 3   VISRDVTFDEDSMMKPPSSQHAEDIRTEEISQPVEYDVASPSSVRSVSIEVPTDVTLGRD 182
           +ISRDVTFDE +M+K  + + A+       S P + + A         + +PT  T    
Sbjct: 684 IISRDVTFDESAMLKKVNPEGAD-------STPQQVECARKQVEFEPKVVIPTRNTT--- 733

Query: 183 QAEDQIIEPTVDQPEVDTEVTAVEQDQGQSVQGSRRQDQGLRVQDSIAANRPKRQIRKPS 362
            ++  + E   D+ EV T+     + Q QS                IA  R +R I+KPS
Sbjct: 734 -SDSAMAEEESDEEEVPTQ-----ESQQQSAP--------------IAVRRQRRDIQKPS 773

Query: 363 RFNDMVAYALP 395
           RF DMVAYALP
Sbjct: 774 RFMDMVAYALP 784


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