BLASTX nr result

ID: Ophiopogon24_contig00012531 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00012531
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252521.1| ribonuclease II, chloroplastic/mitochondrial...   103   1e-22
ref|XP_020252520.1| ribonuclease II, chloroplastic/mitochondrial...   103   2e-22
gb|ONK76930.1| uncharacterized protein A4U43_C02F1360 [Asparagus...   103   2e-22
ref|XP_010922307.1| PREDICTED: ribonuclease II, chloroplastic/mi...    63   2e-08
ref|XP_008785582.1| PREDICTED: ribonuclease II, chloroplastic/mi...    59   4e-07
ref|XP_009384841.1| PREDICTED: ribonuclease II, chloroplastic/mi...    55   8e-06

>ref|XP_020252521.1| ribonuclease II, chloroplastic/mitochondrial isoform X2 [Asparagus
           officinalis]
          Length = 716

 Score =  103 bits (257), Expect = 1e-22
 Identities = 64/120 (53%), Positives = 70/120 (58%)
 Frame = -1

Query: 361 MNSPMACRAMSNLYSPPFCGFICHXXXXXXXXXXXXXRWPSLGFCNPRPRFRSNDFRFNG 182
           MNSPMA RA++ L SPP CGFICH               P LG  +P P  RS    F+ 
Sbjct: 1   MNSPMASRAVTGLCSPPLCGFICHRFFAHRRPSHIRS--PGLGIWSP-PLSRSRCSGFSL 57

Query: 181 VPPPSPCQIHXXXXXXXXXXXEIRSRKRLRALNKVGLPTSKEISEVKLEKRVLQKGLLVE 2
               SP QIH            IRSRKRLRALNKVG P SKE+SEVKL KRVLQKGLL+E
Sbjct: 58  RLRSSPRQIHSLVESVMEELESIRSRKRLRALNKVGFPASKELSEVKLGKRVLQKGLLLE 117


>ref|XP_020252520.1| ribonuclease II, chloroplastic/mitochondrial isoform X1 [Asparagus
           officinalis]
          Length = 804

 Score =  103 bits (257), Expect = 2e-22
 Identities = 64/120 (53%), Positives = 70/120 (58%)
 Frame = -1

Query: 361 MNSPMACRAMSNLYSPPFCGFICHXXXXXXXXXXXXXRWPSLGFCNPRPRFRSNDFRFNG 182
           MNSPMA RA++ L SPP CGFICH               P LG  +P P  RS    F+ 
Sbjct: 1   MNSPMASRAVTGLCSPPLCGFICHRFFAHRRPSHIRS--PGLGIWSP-PLSRSRCSGFSL 57

Query: 181 VPPPSPCQIHXXXXXXXXXXXEIRSRKRLRALNKVGLPTSKEISEVKLEKRVLQKGLLVE 2
               SP QIH            IRSRKRLRALNKVG P SKE+SEVKL KRVLQKGLL+E
Sbjct: 58  RLRSSPRQIHSLVESVMEELESIRSRKRLRALNKVGFPASKELSEVKLGKRVLQKGLLLE 117


>gb|ONK76930.1| uncharacterized protein A4U43_C02F1360 [Asparagus officinalis]
          Length = 804

 Score =  103 bits (257), Expect = 2e-22
 Identities = 64/120 (53%), Positives = 70/120 (58%)
 Frame = -1

Query: 361 MNSPMACRAMSNLYSPPFCGFICHXXXXXXXXXXXXXRWPSLGFCNPRPRFRSNDFRFNG 182
           MNSPMA RA++ L SPP CGFICH               P LG  +P P  RS    F+ 
Sbjct: 1   MNSPMASRAVTGLCSPPLCGFICHRFFAHRRPSHIRS--PGLGIWSP-PLSRSRCSGFSL 57

Query: 181 VPPPSPCQIHXXXXXXXXXXXEIRSRKRLRALNKVGLPTSKEISEVKLEKRVLQKGLLVE 2
               SP QIH            IRSRKRLRALNKVG P SKE+SEVKL KRVLQKGLL+E
Sbjct: 58  RLRSSPRQIHSLVESVMEELESIRSRKRLRALNKVGFPASKELSEVKLGKRVLQKGLLLE 117


>ref|XP_010922307.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial [Elaeis
           guineensis]
          Length = 798

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 48/127 (37%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
 Frame = -1

Query: 361 MNSPMACRAMS-------NLYSPPFCGFICHXXXXXXXXXXXXXRWPSLGFCNPRPRFRS 203
           M SPMA RAMS       +   PP   F+                  SL   +P PRFR 
Sbjct: 1   MKSPMATRAMSGCSLFRSSTCCPPLSAFLSRRYFHPRPSTLCG----SLRLGHPTPRFRL 56

Query: 202 NDFRFNGVPPPSPCQIHXXXXXXXXXXXEIRSRKRLRALNKVGLPTSKEISEVKLEKRVL 23
           +   F           H           EIR+ +R+RA  K+GLP+SKE+ EVKLEKR L
Sbjct: 57  DGLVFRCDASGRSRFAHSLVDCVMEELAEIRASRRIRASIKMGLPSSKELFEVKLEKRTL 116

Query: 22  QKGLLVE 2
           QKGLL+E
Sbjct: 117 QKGLLLE 123


>ref|XP_008785582.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial isoform X1
           [Phoenix dactylifera]
          Length = 798

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 48/127 (37%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
 Frame = -1

Query: 361 MNSPMACRAMS-------NLYSPPFCGFICHXXXXXXXXXXXXXRWPSLGFCNPRPRFRS 203
           M SPMA RAMS       + Y PP   F+                   LG   PR R   
Sbjct: 1   MKSPMATRAMSGCSLFRSSAYCPPLSAFLSLRFFQPRPSTLCGSL--RLGHQTPRFRLDG 58

Query: 202 NDFRFNGVPPPSPCQIHXXXXXXXXXXXEIRSRKRLRALNKVGLPTSKEISEVKLEKRVL 23
             FR++G         H           EIR+ +R RA  K+GLP+SKE+ E+KLEKR L
Sbjct: 59  VVFRYDGSGRSRFA--HSLVDSVMEELAEIRASRRSRASIKMGLPSSKELFELKLEKRTL 116

Query: 22  QKGLLVE 2
           QKGLL+E
Sbjct: 117 QKGLLLE 123


>ref|XP_009384841.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial [Musa
           acuminata subsp. malaccensis]
          Length = 792

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/81 (40%), Positives = 42/81 (51%)
 Frame = -1

Query: 244 PSLGFCNPRPRFRSNDFRFNGVPPPSPCQIHXXXXXXXXXXXEIRSRKRLRALNKVGLPT 65
           PSLGF   R  F               C +H            IR+ +R+RA  KVGLP+
Sbjct: 48  PSLGFRLDRYGFSERS-----------CYVHSLVESVMEELAVIRATRRIRATAKVGLPS 96

Query: 64  SKEISEVKLEKRVLQKGLLVE 2
           SKE+ + KLEK+ LQKGLL+E
Sbjct: 97  SKELFDAKLEKKTLQKGLLLE 117


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