BLASTX nr result
ID: Ophiopogon24_contig00001935
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00001935
(3865 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp... 2147 0.0
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ... 1788 0.0
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub... 1788 0.0
ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana... 1692 0.0
ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V sub... 1667 0.0
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub... 1667 0.0
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1647 0.0
ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub... 1578 0.0
ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Set... 1553 0.0
gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria ital... 1545 0.0
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub... 1538 0.0
gb|PAN04046.1| hypothetical protein PAHAL_A00310 [Panicum hallii] 1530 0.0
ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V sub... 1528 0.0
ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V sub... 1525 0.0
dbj|GAV75269.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol... 1524 0.0
ref|XP_021314141.1| DNA-directed RNA polymerase V subunit 1 isof... 1522 0.0
ref|XP_021314138.1| DNA-directed RNA polymerase V subunit 1 isof... 1522 0.0
gb|AQK60576.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 1518 0.0
gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial ... 1518 0.0
gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 1518 0.0
>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
Length = 1945
Score = 2147 bits (5564), Expect = 0.0
Identities = 1062/1289 (82%), Positives = 1162/1289 (90%), Gaps = 1/1289 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
AT EEVCK+SINDCPISHPSQLTNPFLGLPLE+GKCESCGTAE+GNCEGHFGYIELPVP+
Sbjct: 23 ATAEEVCKYSINDCPISHPSQLTNPFLGLPLESGKCESCGTAESGNCEGHFGYIELPVPV 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVAT-CSHCRDLPAISIKEVKTS 357
YHP HISEL+ ILSLVCF CMR S S AT CSHCRD+P ISIKEVKTS
Sbjct: 83 YHPLHISELRDILSLVCFHCMRTKKGKIKDKAGKSSNSAATSCSHCRDIPPISIKEVKTS 142
Query: 358 DGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLS 537
DGA+CLQL+V S+ R+R+GFWNFL+++GFR+GDGTCRTLLPLEALNILKEIPEETKKRL
Sbjct: 143 DGAVCLQLTVSSKLRLREGFWNFLSKYGFRHGDGTCRTLLPLEALNILKEIPEETKKRLV 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
AKG+F Q+GY+LQYLPVPPNCLLVPEISDGKSVMSSD+SIS+LKRVL+KIELIKRSRSGS
Sbjct: 203 AKGYFPQDGYILQYLPVPPNCLLVPEISDGKSVMSSDISISLLKRVLSKIELIKRSRSGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFI 897
PNFESHEVECNDLQL IAEYMHLRG+ +APHD+++K +LG DAGKNSSKQWLEKIRTLFI
Sbjct: 263 PNFESHEVECNDLQLVIAEYMHLRGSAKAPHDVSKKLVLGPDAGKNSSKQWLEKIRTLFI 322
Query: 898 SKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYK 1077
SKGSGFSSRSVITGDSY GIN+IGLPSEIAK+VTFEERVT HNLERLQKMV++ LCVTY+
Sbjct: 323 SKGSGFSSRSVITGDSYIGINEIGLPSEIAKKVTFEERVTAHNLERLQKMVNDGLCVTYR 382
Query: 1078 DGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTV 1257
DG STYAIAVGS+ HT LKVGQ+I+R IVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTV
Sbjct: 383 DGKSTYAIAVGSKAHTILKVGQVISRSIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTV 442
Query: 1258 KINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSL 1437
KINPLVCAPLGADFDGDC+HIFYPQSLAAKAEV+ELFS++QQLLSSHSGQLNFQLVSDSL
Sbjct: 443 KINPLVCAPLGADFDGDCVHIFYPQSLAAKAEVVELFSVDQQLLSSHSGQLNFQLVSDSL 502
Query: 1438 LSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCI 1617
LSLK+M +SFLRKE AQQL MFVSPVLPPPAVF+AC SGSLWTIYQILQ ALPPSVDC
Sbjct: 503 LSLKLMANSSFLRKEKAQQLGMFVSPVLPPPAVFRACGSGSLWTIYQILQSALPPSVDCT 562
Query: 1618 GQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEG 1797
GQ HVINQSEILKFEFNRD LQSSLTDIITSILVAKGP+ AL FNSLQPLLMEVL EG
Sbjct: 563 GQRHVINQSEILKFEFNRDFLQSSLTDIITSILVAKGPKAALNFFNSLQPLLMEVLQLEG 622
Query: 1798 FSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACIL 1977
FS+SL+DF +PN +L EV+D IQ+I+S + QLR+SYDELL LQVEK+L R+K+PIVA IL
Sbjct: 623 FSVSLQDFYIPNPVLREVKDGIQDIASFVPQLRMSYDELLGLQVEKDLNRLKIPIVAFIL 682
Query: 1978 QLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDK 2157
S+LG+VIDSKSESSISKV +GKLYSKALV+D++ FVS++S +
Sbjct: 683 HSSSLGYVIDSKSESSISKVLQQIGFLGLQLFVKGKLYSKALVEDIHHLFVSRFSTTDVS 742
Query: 2158 PSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVC 2337
PSSEA+GLVK+ L HGL PFE FVHSISAREVIIRSSRGLTEPG+LFKNLMAILRDVV+C
Sbjct: 743 PSSEAHGLVKNPLFHGLNPFEDFVHSISAREVIIRSSRGLTEPGVLFKNLMAILRDVVIC 802
Query: 2338 YDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTN 2517
YDGTVRNVCSNSIIQ YELDE + V+ AGEPVGVLAATAIS PAYKAVLDSS+STN
Sbjct: 803 YDGTVRNVCSNSIIQLAYELDE-ARAECVATAGEPVGVLAATAISNPAYKAVLDSSSSTN 861
Query: 2518 SSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCA 2697
SSWE MKEILLCKA YQN IDRR+VLYLN+CCCGKKFCREN+ALAVQNCLRSV LKHCA
Sbjct: 862 SSWELMKEILLCKAAYQNAFIDRRIVLYLNDCCCGKKFCRENSALAVQNCLRSVTLKHCA 921
Query: 2698 LDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG 2877
+D SIEYQKQI LPNS+ T SGLVGH+HLD RLKILNQ TDG+LHKCQEV +GHTRKKG
Sbjct: 922 IDFSIEYQKQICLPNSA-TVSGLVGHLHLDTTRLKILNQNTDGVLHKCQEVIRGHTRKKG 980
Query: 2878 HLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPI 3057
HLSNI RRTFLS+SE C S Q ND NLSEFPCLQFSY AG VDETL+ GMHIMINTICPI
Sbjct: 981 HLSNILRRTFLSASEDCSSLQSNDANLSEFPCLQFSYCAGGVDETLQQGMHIMINTICPI 1040
Query: 3058 LLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIV 3237
LLDTI+KGDPR+D VNIIW+GPD+TSWVS+P ++GELALEVVVQKVAA+K GDAWRIV
Sbjct: 1041 LLDTIIKGDPRIDTVNIIWSGPDSTSWVSNPDNPVRGELALEVVVQKVAAKKNGDAWRIV 1100
Query: 3238 LDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLV 3417
LDACLPV+HLI+TTRSIPYGIQQIKE+FGISCAFDQSVQRLSK IRMVSKGVIKEHLVLV
Sbjct: 1101 LDACLPVIHLINTTRSIPYGIQQIKEIFGISCAFDQSVQRLSKSIRMVSKGVIKEHLVLV 1160
Query: 3418 GNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVS 3597
GNNMTCTGNLIGFNTSGFK+LFRSLKVQVPFTEATLLTPMKCFE+AAEKCHTD+LGS+VS
Sbjct: 1161 GNNMTCTGNLIGFNTSGFKSLFRSLKVQVPFTEATLLTPMKCFEKAAEKCHTDSLGSIVS 1220
Query: 3598 SVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDI 3777
SVSWGKHVA+GTGTHFEVIWG K QV CNEDVGKDVYDLLAWVREPQE+DLPGACLGSDI
Sbjct: 1221 SVSWGKHVAVGTGTHFEVIWGHKNQVACNEDVGKDVYDLLAWVREPQERDLPGACLGSDI 1280
Query: 3778 EDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
+DFLDDFQ DDMPLSPEPN+ EKPTFED
Sbjct: 1281 DDFLDDFQGDDMPLSPEPNNICEKPTFED 1309
>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
Length = 1673
Score = 1788 bits (4632), Expect = 0.0
Identities = 886/1291 (68%), Positives = 1059/1291 (82%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
ATFEE+ K++INDCP+SHPSQLTNPFLGLPLE GKCESCGTAE G CEGHFGYIELPVP+
Sbjct: 23 ATFEEIRKYAINDCPVSHPSQLTNPFLGLPLEFGKCESCGTAEPGKCEGHFGYIELPVPV 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHPSH+SEL+ ILSLVC KCMR VS +C +CRDLP IS+KEVKT+D
Sbjct: 83 YHPSHVSELRQILSLVCLKCMRMKGKVKHGSGKEK-VSTTSCLYCRDLPPISVKEVKTTD 141
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLSA 540
A+CL+L V SRTR+RDGFW FL RFGF YGD CR LLP EALNILKEIPEETKKRL+A
Sbjct: 142 NALCLELRVSSRTRLRDGFWKFLDRFGFCYGDTYCRPLLPYEALNILKEIPEETKKRLAA 201
Query: 541 KGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGSP 720
KG+F Q G++LQYLPVPPNCL VPE+SDGKS+MSSD+SIS+LKRVLNKIELIKRSRSG P
Sbjct: 202 KGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMSSDISISLLKRVLNKIELIKRSRSGFP 261
Query: 721 NFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFIS 900
NF+SHEVE NDLQ +I++YMHLRGT + P DIT+KF +G +A + S+K WLEK+RTLFI
Sbjct: 262 NFKSHEVESNDLQSSISQYMHLRGTPKVPQDITKKFAIGTEANECSTKLWLEKMRTLFIR 321
Query: 901 KGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYKD 1080
KGSGFSSRSVITGD+Y G+N IGLPSEIAKR+TFEERVTVHN+++LQ++VD LCVTYKD
Sbjct: 322 KGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTVHNMKQLQEVVDKGLCVTYKD 381
Query: 1081 GNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTVK 1260
G STYAIAVGS+GHT LKVGQ+INR I+DGDIVFINRPPSTHKHSLQAF VYVHDDHTVK
Sbjct: 382 GFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINRPPSTHKHSLQAFYVYVHDDHTVK 441
Query: 1261 INPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSLL 1440
INPL+CAPLGADFDGDC+HIFYPQS AAKAEV+ELFS+E+QLLSSH+G LN QLV D+LL
Sbjct: 442 INPLICAPLGADFDGDCVHIFYPQSFAAKAEVLELFSVEKQLLSSHTGNLNLQLVHDTLL 501
Query: 1441 SLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCIG 1620
+LK+M+ T+FLRK A+QL MFVSP+LPPPA+FKA SG WT++QILQ ALP +DC G
Sbjct: 502 ALKLMSNTAFLRKTMAEQLAMFVSPILPPPAIFKAHKSGPFWTVHQILQNALPALLDCFG 561
Query: 1621 QSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEGF 1800
+ H+I+ SEI+K + RD +Q T+IITSI + KGP++AL FN LQPLLMEVL EGF
Sbjct: 562 ERHLISDSEIIKLDLRRDAVQPLFTEIITSIFIKKGPKEALNFFNMLQPLLMEVLVMEGF 621
Query: 1801 SISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACILQ 1980
SISL+DF VP++++ + Q ++QE S +L QLR Y+EL+ELQVE +LK IK+PIV IL
Sbjct: 622 SISLKDFYVPSAVIKKAQRNVQENSFILDQLRSKYNELVELQVENHLKSIKLPIVNFILN 681
Query: 1981 LSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDKP 2160
L++LG++IDSKS+SSI KV DRGKLYS ALV+D +++FV+KYS
Sbjct: 682 LTSLGYLIDSKSDSSIIKVVQQLGFLGLQLFDRGKLYSGALVEDCFTNFVNKYSTSGADH 741
Query: 2161 SSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVCY 2340
S EAYGLVK+ HGL P+E VH+IS+REVI+RSSRGLTEPG LFKNLMAILRDV++CY
Sbjct: 742 SCEAYGLVKNCFFHGLNPYEELVHAISSREVIVRSSRGLTEPGTLFKNLMAILRDVIICY 801
Query: 2341 DGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTNS 2520
DG+VRNVCSNSIIQFEY D+G S++VSPAGEPVGVLAATAIS PAYKAVL+SS S NS
Sbjct: 802 DGSVRNVCSNSIIQFEYGEDDGANSLNVSPAGEPVGVLAATAISNPAYKAVLESSQSNNS 861
Query: 2521 SWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCAL 2700
SWE MKEILLCK ++N + DRRV+LYLN+C CGKKFC+ENAA+AVQNCL+ V LK CA
Sbjct: 862 SWELMKEILLCKVMFKNVVTDRRVILYLNDCFCGKKFCKENAAIAVQNCLKRVTLKDCAC 921
Query: 2701 DLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGH 2880
D SIEYQK+I L +SS T SGLVGHIHLD M LK+LN++ D IL KCQ+V G+ +KKG
Sbjct: 922 DFSIEYQKEISLRDSSETTSGLVGHIHLDKMGLKLLNRSPDEILRKCQDVIFGYAKKKGK 981
Query: 2881 LSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIMINTIC 3051
LS+ FRR LS SECC ++QP+ GNLS FPCLQFSY + E+LE +H+M NTIC
Sbjct: 982 LSHFFRRIILSLSECCCTRQPDVGNLSPFPCLQFSYCDQSATPDCESLEGAIHVMANTIC 1041
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
PILLDTI+KGDPRV NI+W GPDATSWV + +TLKGE+A+EVVV+K A R+ GDAWR
Sbjct: 1042 PILLDTIIKGDPRVYDANIVWIGPDATSWVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWR 1101
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I V+KGV+K+HL+
Sbjct: 1102 TVMDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSASITKVAKGVLKDHLI 1161
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SV
Sbjct: 1162 LVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCFERAAEKCHTDSLASV 1221
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS WGKHVA+GTG+ F+++W KQQ+ N+++GK YD L VR +++ C
Sbjct: 1222 VSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELVRTSSQREAGDGC-SL 1279
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++D L+ +N+++ LSPE E+ TF+D
Sbjct: 1280 DVDD-LEANENNEVCLSPE--IGFEELTFDD 1307
>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
Length = 1708
Score = 1788 bits (4630), Expect = 0.0
Identities = 886/1291 (68%), Positives = 1058/1291 (81%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
AT EE+ SINDCP+SHPSQLTNPFLGLPLE GKCESCGTAE G CEGHFGYIELPVP+
Sbjct: 23 ATIEEIRTCSINDCPVSHPSQLTNPFLGLPLEFGKCESCGTAEPGKCEGHFGYIELPVPV 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHPSH+SEL+ ILSLVC KCMR V+ +C +CRDLP IS+KEVKT+D
Sbjct: 83 YHPSHVSELRQILSLVCLKCMRMKGKVKHGNGKEK-VTTTSCLYCRDLPPISVKEVKTTD 141
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLSA 540
A+CL+L V SRTR+RDGFW FL RFGF YGD CR LLP EALNILKEIP+ETKKRL+A
Sbjct: 142 NALCLELRVSSRTRLRDGFWKFLDRFGFCYGDTYCRPLLPYEALNILKEIPQETKKRLAA 201
Query: 541 KGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGSP 720
KG+F Q G++LQYLPVPPNCL VPE+SDGKS+MSSD+SIS+LKRVLNKIELIKRSRSG P
Sbjct: 202 KGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMSSDISISLLKRVLNKIELIKRSRSGFP 261
Query: 721 NFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFIS 900
NF+SHEVE NDLQ +I++YMHLRGT + P DIT+KF +G +A + S+K WLEK+RTLFI
Sbjct: 262 NFKSHEVESNDLQSSISQYMHLRGTPKVPQDITKKFAIGTEANECSTKLWLEKMRTLFIR 321
Query: 901 KGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYKD 1080
KGSGFSSRSVITGD+Y G+N IGLPSEIAKR+TFEERVTVHN+++LQ++VD LCVTYKD
Sbjct: 322 KGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTVHNMKQLQEVVDKGLCVTYKD 381
Query: 1081 GNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTVK 1260
G STYAIAVGS+GHT LKVGQ+INR I+DGDIVFINRPPSTHKHSLQAF VYVHDDHTVK
Sbjct: 382 GFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINRPPSTHKHSLQAFYVYVHDDHTVK 441
Query: 1261 INPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSLL 1440
INPL+CAPLGADFDGDC+HIFYPQSLAAKAEV+ELFS+E+QLLSSH+G LN QLV D+LL
Sbjct: 442 INPLICAPLGADFDGDCVHIFYPQSLAAKAEVLELFSVEKQLLSSHTGNLNLQLVHDTLL 501
Query: 1441 SLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCIG 1620
+LK+M+ +FLRK TA+QL MFVSP+LPPPA+FKA SG WT++QILQ ALP +DC G
Sbjct: 502 ALKLMSNAAFLRKTTAEQLAMFVSPILPPPAIFKAHKSGPFWTVHQILQNALPTFLDCFG 561
Query: 1621 QSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEGF 1800
+ H+I+ EI+K + RD +QS T+IITSI + KGP++AL FN LQPLLMEVL EGF
Sbjct: 562 ERHLISNGEIIKLDLRRDAVQSLFTEIITSIFIMKGPKEALNFFNMLQPLLMEVLVMEGF 621
Query: 1801 SISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACILQ 1980
SISL+DF VP++++ + Q S+QE S +L QLR Y+EL+ELQVE +LK IK+PIV IL
Sbjct: 622 SISLQDFYVPSAVIEKAQQSVQENSFILDQLRSKYNELVELQVENHLKSIKLPIVNFILN 681
Query: 1981 LSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDKP 2160
L++LG +IDSKS+SSI KV DRGKLYS+ALV+D +++FV+KYS
Sbjct: 682 LTSLGNLIDSKSDSSIIKVVQQLGFLGLQLFDRGKLYSRALVEDCFTNFVNKYSTSGADH 741
Query: 2161 SSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVCY 2340
S EAYGLVK+ HGL P+E VH+IS+REVI+RSSRGLTEPG LFKNLMAILRDV++CY
Sbjct: 742 SCEAYGLVKNCFFHGLNPYEELVHAISSREVIVRSSRGLTEPGTLFKNLMAILRDVIICY 801
Query: 2341 DGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTNS 2520
DG+VRNVCSNSIIQFEY D+G S++VSPAGEPVGVLAATAIS PAYKAVL+SS S NS
Sbjct: 802 DGSVRNVCSNSIIQFEYGEDDGANSLNVSPAGEPVGVLAATAISNPAYKAVLESSQSNNS 861
Query: 2521 SWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCAL 2700
SWE MKEILLCK ++N + DRRV+LYLN+C CGKKFC+ENAA+AVQNCL+ V LK CA
Sbjct: 862 SWELMKEILLCKVTFKNVVTDRRVILYLNDCLCGKKFCKENAAIAVQNCLKRVTLKDCAC 921
Query: 2701 DLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGH 2880
D SIEYQK+I L +SS T SGLVGHIHLD MRLK+LN++ D IL KCQ+V G+ +KKG
Sbjct: 922 DFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILRKCQDVIFGYGKKKGK 981
Query: 2881 LSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIMINTIC 3051
LS+ FRR LS SECC ++QP+ GNLS FPCLQFSY + E+LE +H+M NTIC
Sbjct: 982 LSHFFRRIILSLSECCSTRQPDVGNLSPFPCLQFSYRDQSTTPDCESLEGAIHVMANTIC 1041
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
PILLDTI+KGDPRV NI+WTGPDATSWV + +TLKGE+A+EVVV+K A R+ GDAWR
Sbjct: 1042 PILLDTIIKGDPRVHEANIVWTGPDATSWVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWR 1101
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
V+DACLPV+HLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I V+KGV+K HL+
Sbjct: 1102 TVIDACLPVIHLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSASITKVAKGVLKGHLI 1161
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCFERAAEKCHTD+L SV
Sbjct: 1162 LVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCFERAAEKCHTDSLVSV 1221
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS WGKHVA+GTG+ F+++W KQQ+ N+++GK YD L VR +++ C
Sbjct: 1222 VSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELVRTSSQREAGDGC-SL 1279
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++D L+ +N+++ LSPE E+ TF+D
Sbjct: 1280 DVDD-LEVNENNEVCLSPE--IGFEELTFDD 1307
>ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus]
Length = 1800
Score = 1692 bits (4383), Expect = 0.0
Identities = 831/1292 (64%), Positives = 1030/1292 (79%), Gaps = 4/1292 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
AT EE+C +SI++CPISHPSQLTNPFLGLPLE+GKCESCGTAE+G CEGHFGYIELP+PI
Sbjct: 26 ATDEEICIYSISECPISHPSQLTNPFLGLPLESGKCESCGTAEHGKCEGHFGYIELPIPI 85
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHPS++SELK I SLVC KC+R VS TC CRDL +IS+KEVKT+D
Sbjct: 86 YHPSYVSELKQIFSLVCLKCLRMKKGKVKHTNGKDSVSTTTCFFCRDL-SISVKEVKTTD 144
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLSA 540
GA+ L+L VPSR R+RDGFWNFL RFGF YGD CR LLP EALNILKEIPEET+++L+
Sbjct: 145 GALSLELRVPSRKRLRDGFWNFLDRFGFHYGDSFCRPLLPCEALNILKEIPEETRRKLAT 204
Query: 541 KGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGSP 720
KG+F Q GY++Q+LPVPPNCL VPE SDGKS+MS D+SI++LKRVLNKIE+IKRSRSGSP
Sbjct: 205 KGYFPQTGYIMQHLPVPPNCLYVPEFSDGKSIMSFDISIALLKRVLNKIEMIKRSRSGSP 264
Query: 721 NFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFIS 900
NFESHEVE DLQ ++A+YMHLRGTT+ P D +++FM+G +A + S+KQWLEK+RTLFI
Sbjct: 265 NFESHEVESTDLQSSVAQYMHLRGTTKGPQD-SKRFMIGMEANECSTKQWLEKMRTLFIR 323
Query: 901 KGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYKD 1080
KGSGFSSRSVITGD+Y GIN IGLPSEIAK++TFEERVT HN++RLQ++VDNRLCVTY+D
Sbjct: 324 KGSGFSSRSVITGDAYIGINVIGLPSEIAKKITFEERVTEHNMKRLQEVVDNRLCVTYRD 383
Query: 1081 GNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTVK 1260
G STYAI+VGS+GHT LK+GQ++NR IVDGDIVFINRPPSTHKHSLQAF VYVHDDHTVK
Sbjct: 384 GASTYAISVGSKGHTCLKIGQIVNRRIVDGDIVFINRPPSTHKHSLQAFYVYVHDDHTVK 443
Query: 1261 INPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSLL 1440
INPL+CAPLGADFDGDC+HIFYPQSLAAKAEV+ELFS+E+QLLSSH+G LN QLV+DSLL
Sbjct: 444 INPLICAPLGADFDGDCVHIFYPQSLAAKAEVVELFSVEKQLLSSHTGNLNLQLVNDSLL 503
Query: 1441 SLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCIG 1620
+LK++ +F+RKETAQQL MFVSP LPPPA++K+ NSG WT Q+LQCALP D G
Sbjct: 504 ALKLLYLKTFIRKETAQQLAMFVSPNLPPPAIYKSHNSGPCWTASQVLQCALPSLFDSFG 563
Query: 1621 QSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEGF 1800
+ H I+ SE++K +F+ D +QS ++II+SI KGP++AL FN LQPLLME L +GF
Sbjct: 564 EKHQISCSEMIKLDFDVDFVQSCFSEIISSIFTIKGPKEALNFFNVLQPLLMETLFLDGF 623
Query: 1801 SISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACILQ 1980
SISL+DF+VP +++ VQ SIQ S +L + R + ++ +E++VE +LK IK PIV I++
Sbjct: 624 SISLKDFHVPKAVIQGVQKSIQRNSYILDKTRYTQNQFVEMRVENHLKSIKQPIVEFIVK 683
Query: 1981 LSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDKP 2160
S+LG++IDSKS+S+I+KV GK YS LV+D +S FV+++S DK
Sbjct: 684 FSSLGYLIDSKSDSAIAKVLQQLGFLGLQLFHEGKFYSSRLVEDCFSTFVNRFSTGGDKH 743
Query: 2161 SSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVCY 2340
EAYGLVKSS +GL P+E VH+IS+REV++RSSRGLTEPG LFKNLMAILRDVV+CY
Sbjct: 744 PCEAYGLVKSSFYNGLNPYEELVHAISSREVLVRSSRGLTEPGTLFKNLMAILRDVVICY 803
Query: 2341 DGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTNS 2520
DG+VRNVCSNS+IQF+Y D+ V+ + +SP GEPVGVLAATAIS PAYKAVLDSS S NS
Sbjct: 804 DGSVRNVCSNSVIQFDYGDDDRVDLIGLSPPGEPVGVLAATAISNPAYKAVLDSSQSNNS 863
Query: 2521 SWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCAL 2700
SWE MKEILL K +Y+ND+ DRRV+LYLN+C CGKKFC+E AALAVQ+CL+ V L+ C
Sbjct: 864 SWELMKEILLTKVSYKNDVNDRRVILYLNDCFCGKKFCKERAALAVQSCLKRVTLEDCVT 923
Query: 2701 DLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGH 2880
D IEYQK+I LP + SGLVGHIHLD M+L+ LN++ D +LH C+EV + +KKG
Sbjct: 924 DFLIEYQKEIILPGNPEPTSGLVGHIHLDKMQLESLNRSIDEVLHTCEEVILKNAKKKGQ 983
Query: 2881 LSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHG---MHIMINTIC 3051
S++F++ L +SECC Q+ D NLS PCLQFSY V + E+ + ++ NT+
Sbjct: 984 FSHLFKKITLMASECCSIQKAKDSNLSRTPCLQFSYCDENVAPSCEYFEGIVQVLANTVY 1043
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
P LLDTIVKGDPRV ++W GPDATSWV + TLKGELA+E+V++K AA GDAWR
Sbjct: 1044 PTLLDTIVKGDPRVHEAKVVWVGPDATSWVRNSSNTLKGELAVEMVIEKSAAPHNGDAWR 1103
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
+DACLPVM LID RSIPYG+QQI+ELFGISCAFDQ+V+R+S IR V+KGV+K+HL+
Sbjct: 1104 TAMDACLPVMRLIDARRSIPYGVQQIRELFGISCAFDQAVERMSTSIRKVAKGVLKDHLI 1163
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV ++MTCTG L GFNT G+KA FRSLKVQVPFTEATL TPMKCFERAAEKCH+D+L S
Sbjct: 1164 LVASSMTCTGKLNGFNTGGYKATFRSLKVQVPFTEATLFTPMKCFERAAEKCHSDSLDSG 1223
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR-EPQEKDLPGACLG 3768
VSS SWGKHVALGTG+ F++IW K+Q+ ++D+GK +YD L VR +++ GACL
Sbjct: 1224 VSSCSWGKHVALGTGSSFQIIW-DKKQMANDKDIGKGLYDFLVMVRTSGDQREANGACL- 1281
Query: 3769 SDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++D L++ ++ + LSP+ + PTFE+
Sbjct: 1282 EDVDD-LEEENDEALCLSPQFDDGFTNPTFEE 1312
>ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 1444
Score = 1667 bits (4318), Expect = 0.0
Identities = 832/1291 (64%), Positives = 1017/1291 (78%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
AT EE+ +SI+DCPISHPSQL NPFLGLPLE+G CE+CGTAE GNCEGHFGYIELP+P+
Sbjct: 23 ATAEEIRTYSISDCPISHPSQLANPFLGLPLESGGCETCGTAEIGNCEGHFGYIELPIPV 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHPSH+SEL+ +LSLVC KC+R +S C +C DLP+ISIKEVKT+D
Sbjct: 83 YHPSHVSELRDLLSLVCLKCLRMKKVKYSVGK--GKISSMPCLYCLDLPSISIKEVKTAD 140
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLSA 540
GA CL+L V SR+R++DGFW+FL RFG+ Y R LLP EAL IL+++PEET+K+L+
Sbjct: 141 GATCLELRVSSRSRLQDGFWSFLDRFGYHYAGTFRRPLLPSEALKILEKLPEETQKKLAG 200
Query: 541 KGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGSP 720
KG+F QNG++++ LPVPPNCL VPEISDGK VMSSD+S S+LK++L KIELIKRSRSGSP
Sbjct: 201 KGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSSDISKSLLKKILGKIELIKRSRSGSP 260
Query: 721 NFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFIS 900
+FES+EVE NDLQ +IA YM+LRGTT+AP DITR+F G + + +KQWL+KIRTLFI
Sbjct: 261 SFESYEVETNDLQSSIALYMNLRGTTKAPRDITRRFAFGNETNEYLTKQWLDKIRTLFIR 320
Query: 901 KGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYKD 1080
KGSGFSSRSVI+GD Y GIN +GLPSEIAKR+TFEERVT HN+ RLQ +VD+RLC+TYKD
Sbjct: 321 KGSGFSSRSVISGDPYIGINVVGLPSEIAKRITFEERVTEHNITRLQNVVDSRLCITYKD 380
Query: 1081 GNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTVK 1260
G+STYAI+VGS+GHTNLK+GQ+INR I+DGDIVFINRPPSTHKHSLQAF VY+HDDHTVK
Sbjct: 381 GSSTYAISVGSKGHTNLKIGQVINRQILDGDIVFINRPPSTHKHSLQAFYVYIHDDHTVK 440
Query: 1261 INPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSLL 1440
INPL+CAPLGADFDGDC+HIFYPQSL+AKAEV+ELFS+E+QLLSSHSG LN QLV D+ L
Sbjct: 441 INPLICAPLGADFDGDCVHIFYPQSLSAKAEVLELFSVEKQLLSSHSGSLNLQLVQDASL 500
Query: 1441 SLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCIG 1620
+LK++ + F++KE AQQL M+VS +LPPPA+ KA G WTI Q+LQ P +DC G
Sbjct: 501 ALKLIFKSGFIKKEVAQQLGMYVSSMLPPPAIVKATKCGPCWTILQVLQNVFPAFLDCSG 560
Query: 1621 QSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEGF 1800
+ + I +SEIL+ + ++D++QS LTDI+T I KGP + L FN +QPLLME+L EGF
Sbjct: 561 ERYFIRESEILELDTDQDVVQSLLTDIMTHIYHMKGPMEVLNFFNYIQPLLMEMLFMEGF 620
Query: 1801 SISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACILQ 1980
SI L+DF + +++ E+Q SIQ+ S +L QLR DE ELQV+ +L+ +K PIV IL
Sbjct: 621 SICLKDFILSKAVVSEIQGSIQKNSCILNQLRSRRDERAELQVQNHLRSMKDPIVKFILN 680
Query: 1981 LSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDKP 2160
SALG +IDSKS+SS+ KV D+GK YS+ALVDD + +FVSK+S E
Sbjct: 681 SSALGNLIDSKSDSSMVKVVEQLGFLGLQLFDQGKYYSRALVDDCFLNFVSKHSAGEVDH 740
Query: 2161 SSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVCY 2340
SEAYGLVK+S HGL P+E VH+IS+REVI+RSSRGLTEPG LFKNLMAILRDVV+CY
Sbjct: 741 PSEAYGLVKNSFFHGLNPYEMLVHAISSREVIVRSSRGLTEPGTLFKNLMAILRDVVICY 800
Query: 2341 DGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTNS 2520
DG+VRNVC+ S++Q EY DEGV SV+ PAG+PVGVLAATAIS AYKAVLDSS S NS
Sbjct: 801 DGSVRNVCTGSLVQLEYVDDEGVNSVNTPPAGDPVGVLAATAISNLAYKAVLDSSQSNNS 860
Query: 2521 SWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCAL 2700
SWE MKEILLCK +Y+ND+ DRRV+LYLN+CCC K+FC+ENAA V NCL+ V LK CA
Sbjct: 861 SWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKENAAFTVLNCLKRVTLKDCAH 920
Query: 2701 DLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGH 2880
+ IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN D ILHKCQ V + +KKG
Sbjct: 921 EFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILHKCQAVIFSYGKKKGQ 980
Query: 2881 LSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF---AGAVDETLEHGMHIMINTIC 3051
LS+ FRR FLS+ +CC +QP+DGNL PCLQFSY A + +LE +H+M TIC
Sbjct: 981 LSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQNNISLERAIHVMSETIC 1040
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
PILLDTIVKGDPRV V I+W GPDATSWV S +TLKG+L LEVV+ + A R+ GDAWR
Sbjct: 1041 PILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGLEVVLGQDAVRQSGDAWR 1100
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRLSK I+MVSKGV+KEHL+
Sbjct: 1101 TVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRLSKSIKMVSKGVMKEHLL 1160
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMKCFERAAEKC D+L SV
Sbjct: 1161 LVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMKCFERAAEKCQVDSLASV 1220
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS SWGK+VA+GTG F+++W K+Q+ N+D+GK VYD L +RE + G L +
Sbjct: 1221 VSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLELLRETSSGEATGRYL-A 1278
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D+++ ++ + + LSP+ + TF+D
Sbjct: 1279 DVDELAEE---NGICLSPDLDGC---MTFDD 1303
>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 1738
Score = 1667 bits (4318), Expect = 0.0
Identities = 832/1291 (64%), Positives = 1017/1291 (78%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
AT EE+ +SI+DCPISHPSQL NPFLGLPLE+G CE+CGTAE GNCEGHFGYIELP+P+
Sbjct: 23 ATAEEIRTYSISDCPISHPSQLANPFLGLPLESGGCETCGTAEIGNCEGHFGYIELPIPV 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHPSH+SEL+ +LSLVC KC+R +S C +C DLP+ISIKEVKT+D
Sbjct: 83 YHPSHVSELRDLLSLVCLKCLRMKKVKYSVGK--GKISSMPCLYCLDLPSISIKEVKTAD 140
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLSA 540
GA CL+L V SR+R++DGFW+FL RFG+ Y R LLP EAL IL+++PEET+K+L+
Sbjct: 141 GATCLELRVSSRSRLQDGFWSFLDRFGYHYAGTFRRPLLPSEALKILEKLPEETQKKLAG 200
Query: 541 KGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGSP 720
KG+F QNG++++ LPVPPNCL VPEISDGK VMSSD+S S+LK++L KIELIKRSRSGSP
Sbjct: 201 KGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSSDISKSLLKKILGKIELIKRSRSGSP 260
Query: 721 NFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFIS 900
+FES+EVE NDLQ +IA YM+LRGTT+AP DITR+F G + + +KQWL+KIRTLFI
Sbjct: 261 SFESYEVETNDLQSSIALYMNLRGTTKAPRDITRRFAFGNETNEYLTKQWLDKIRTLFIR 320
Query: 901 KGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYKD 1080
KGSGFSSRSVI+GD Y GIN +GLPSEIAKR+TFEERVT HN+ RLQ +VD+RLC+TYKD
Sbjct: 321 KGSGFSSRSVISGDPYIGINVVGLPSEIAKRITFEERVTEHNITRLQNVVDSRLCITYKD 380
Query: 1081 GNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTVK 1260
G+STYAI+VGS+GHTNLK+GQ+INR I+DGDIVFINRPPSTHKHSLQAF VY+HDDHTVK
Sbjct: 381 GSSTYAISVGSKGHTNLKIGQVINRQILDGDIVFINRPPSTHKHSLQAFYVYIHDDHTVK 440
Query: 1261 INPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSLL 1440
INPL+CAPLGADFDGDC+HIFYPQSL+AKAEV+ELFS+E+QLLSSHSG LN QLV D+ L
Sbjct: 441 INPLICAPLGADFDGDCVHIFYPQSLSAKAEVLELFSVEKQLLSSHSGSLNLQLVQDASL 500
Query: 1441 SLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCIG 1620
+LK++ + F++KE AQQL M+VS +LPPPA+ KA G WTI Q+LQ P +DC G
Sbjct: 501 ALKLIFKSGFIKKEVAQQLGMYVSSMLPPPAIVKATKCGPCWTILQVLQNVFPAFLDCSG 560
Query: 1621 QSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEGF 1800
+ + I +SEIL+ + ++D++QS LTDI+T I KGP + L FN +QPLLME+L EGF
Sbjct: 561 ERYFIRESEILELDTDQDVVQSLLTDIMTHIYHMKGPMEVLNFFNYIQPLLMEMLFMEGF 620
Query: 1801 SISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACILQ 1980
SI L+DF + +++ E+Q SIQ+ S +L QLR DE ELQV+ +L+ +K PIV IL
Sbjct: 621 SICLKDFILSKAVVSEIQGSIQKNSCILNQLRSRRDERAELQVQNHLRSMKDPIVKFILN 680
Query: 1981 LSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDKP 2160
SALG +IDSKS+SS+ KV D+GK YS+ALVDD + +FVSK+S E
Sbjct: 681 SSALGNLIDSKSDSSMVKVVEQLGFLGLQLFDQGKYYSRALVDDCFLNFVSKHSAGEVDH 740
Query: 2161 SSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVCY 2340
SEAYGLVK+S HGL P+E VH+IS+REVI+RSSRGLTEPG LFKNLMAILRDVV+CY
Sbjct: 741 PSEAYGLVKNSFFHGLNPYEMLVHAISSREVIVRSSRGLTEPGTLFKNLMAILRDVVICY 800
Query: 2341 DGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTNS 2520
DG+VRNVC+ S++Q EY DEGV SV+ PAG+PVGVLAATAIS AYKAVLDSS S NS
Sbjct: 801 DGSVRNVCTGSLVQLEYVDDEGVNSVNTPPAGDPVGVLAATAISNLAYKAVLDSSQSNNS 860
Query: 2521 SWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCAL 2700
SWE MKEILLCK +Y+ND+ DRRV+LYLN+CCC K+FC+ENAA V NCL+ V LK CA
Sbjct: 861 SWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKENAAFTVLNCLKRVTLKDCAH 920
Query: 2701 DLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGH 2880
+ IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN D ILHKCQ V + +KKG
Sbjct: 921 EFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILHKCQAVIFSYGKKKGQ 980
Query: 2881 LSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF---AGAVDETLEHGMHIMINTIC 3051
LS+ FRR FLS+ +CC +QP+DGNL PCLQFSY A + +LE +H+M TIC
Sbjct: 981 LSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQNNISLERAIHVMSETIC 1040
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
PILLDTIVKGDPRV V I+W GPDATSWV S +TLKG+L LEVV+ + A R+ GDAWR
Sbjct: 1041 PILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGLEVVLGQDAVRQSGDAWR 1100
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRLSK I+MVSKGV+KEHL+
Sbjct: 1101 TVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRLSKSIKMVSKGVMKEHLL 1160
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMKCFERAAEKC D+L SV
Sbjct: 1161 LVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMKCFERAAEKCQVDSLASV 1220
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS SWGK+VA+GTG F+++W K+Q+ N+D+GK VYD L +RE + G L +
Sbjct: 1221 VSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLELLRETSSGEATGRYL-A 1278
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D+++ ++ + + LSP+ + TF+D
Sbjct: 1279 DVDELAEE---NGICLSPDLDGC---MTFDD 1303
>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1-like [Phoenix dactylifera]
Length = 1656
Score = 1647 bits (4265), Expect = 0.0
Identities = 823/1195 (68%), Positives = 980/1195 (82%), Gaps = 3/1195 (0%)
Frame = +1
Query: 289 VSVATCSHCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCR 468
VS +C +CRDLP IS+KEVKT+D A+CL+L V SRTR+RDGFWNFL RFGF YGD CR
Sbjct: 76 VSTTSCLYCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWNFLNRFGFCYGDTYCR 135
Query: 469 TLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSD 648
LLP EALNILKEIPEETKKRL+AKG+F Q G++LQYLPVPPNCL VPEISDGK++MSSD
Sbjct: 136 PLLPYEALNILKEIPEETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEISDGKNIMSSD 195
Query: 649 VSISMLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKF 828
+SIS+LKRVLNKIELIKRSRSG PNF+SHEVE NDLQL+I++YM LRGT + P DIT+KF
Sbjct: 196 ISISLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQLSISQYMRLRGTPKVPQDITKKF 255
Query: 829 MLGQDAGKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEE 1008
+G +A + S+K WLEK+RTLFI KGSGFSSRSVITGD+Y G+N IGLPSEIAKR+TFEE
Sbjct: 256 AIGTEANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEE 315
Query: 1009 RVTVHNLERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFIN 1188
RVTVHN+++LQ++VD LCVTYKDG STYAIAVGS+GHT LKVGQ+INR I+DGDIVFIN
Sbjct: 316 RVTVHNMKQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFIN 375
Query: 1189 RPPSTHKHSLQAFTVYVHDDHTVKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELF 1368
RPPSTHKHSLQAF VYVHDDHTVKINPL+CAPLGADFDGDC+HIFYPQSLAAKAEV+ELF
Sbjct: 376 RPPSTHKHSLQAFYVYVHDDHTVKINPLICAPLGADFDGDCVHIFYPQSLAAKAEVLELF 435
Query: 1369 SIEQQLLSSHSGQLNFQLVSDSLLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKAC 1548
S+E+QLLSSH+G LN QLV D+LL+LK+M T+FLRK TA+QL MFVSP+LPPPA+FKA
Sbjct: 436 SVEKQLLSSHTGNLNLQLVHDTLLALKLMFNTAFLRKATAEQLAMFVSPILPPPAIFKAN 495
Query: 1549 NSGSLWTIYQILQCALPPSVDCIGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKG 1728
SG WT++QILQ ALP VDC G+ H+I SEI+K +F RD +QS T+IITSI + K
Sbjct: 496 KSGPFWTVHQILQNALPAFVDCFGERHLIIDSEIIKLDFRRDAVQSLFTEIITSIFIKKS 555
Query: 1729 PRDALILFNSLQPLLMEVLSSEGFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYD 1908
P++AL FN LQP LMEVL EGFSISL+DF VP +L + Q S+QE S +L QLR Y+
Sbjct: 556 PKEALNFFNMLQPFLMEVLVMEGFSISLKDFYVPREVLEKAQQSVQENSFILHQLRSKYN 615
Query: 1909 ELLELQVEKNLKRIKVPIVACILQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKL 2088
EL+ELQVE +LK IK+PIV IL ++LG +IDSKS+SSI KV DRGKL
Sbjct: 616 ELVELQVENHLKSIKLPIVNFILNFTSLGNLIDSKSDSSIIKVVQQLGFLGLQLFDRGKL 675
Query: 2089 YSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSS 2268
YS+ALV+D +++FV+KYS S EAYGLVK+ HGL P+E VHSIS+REVI+RSS
Sbjct: 676 YSRALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHSISSREVIVRSS 735
Query: 2269 RGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVG 2448
RGLTEPG LFKNLMAILRDV++CYDG+VRNVCSNS+IQFEY D+G S++VSPAGEPVG
Sbjct: 736 RGLTEPGTLFKNLMAILRDVIICYDGSVRNVCSNSVIQFEYGEDDGANSLNVSPAGEPVG 795
Query: 2449 VLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKK 2628
VLAATAIS PAYKAVL+SS S NSSWE MKEILLCK ++N + DRRV+LYLN+C CGKK
Sbjct: 796 VLAATAISNPAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCFCGKK 855
Query: 2629 FCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKIL 2808
FC+ENAA+ VQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHLD MRLK+L
Sbjct: 856 FCKENAAITVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLL 915
Query: 2809 NQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSY 2988
N++ D IL KCQ+V G+ +KKG LS+ FRR L SECC ++QP+ GNLS FPCLQFSY
Sbjct: 916 NRSPDEILRKCQDVIFGYGKKKGKLSHFFRRIILLVSECCSTRQPDVGNLSPFPCLQFSY 975
Query: 2989 ---FAGAVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRT 3159
A E+LE G+H+M NTICPILLDTI+KGDPRV NI+WTGP ATSWV + +T
Sbjct: 976 CDQTATPDCESLERGIHVMANTICPILLDTIIKGDPRVREANIVWTGPYATSWVRNSCKT 1035
Query: 3160 LKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAF 3339
LKGE+A+EVVV+K A+R+ GDAWR V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAF
Sbjct: 1036 LKGEVAVEVVVEKDASRRHGDAWRTVIDACLPVMHLINTRRSIPYGIQQLQELLGISCAF 1095
Query: 3340 DQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEA 3519
DQ+VQRLS I MV+KGV+K+HL+LV N+M+CTGNLIGFNT+G+KAL RSLKVQVPFTEA
Sbjct: 1096 DQAVQRLSASITMVAKGVLKDHLILVANSMSCTGNLIGFNTAGYKALXRSLKVQVPFTEA 1155
Query: 3520 TLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGK 3699
TL+TPMKCFERAAEKCHTD+L SVVSS WGKHVA+GTG+ F+++W K+Q+ N+++GK
Sbjct: 1156 TLITPMKCFERAAEKCHTDSLTSVVSSCLWGKHVAIGTGSPFQILW-NKRQMAENQNIGK 1214
Query: 3700 DVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
YD L VR + + C D++D L +ND++ LSPE EK TF+D
Sbjct: 1215 GFYDFLELVRTSSQGEAGNGC-SVDVDD-LGVNENDEVCLSPE--IGFEKLTFDD 1265
>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
ref|XP_010246064.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
ref|XP_010246066.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
Length = 1908
Score = 1578 bits (4086), Expect = 0.0
Identities = 774/1288 (60%), Positives = 973/1288 (75%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
AT +E+C S+NDCPISHPSQLTNPFLGLPLE G CESCGT+E G CEGHFGYI+LPVPI
Sbjct: 23 ATSQEICTSSVNDCPISHPSQLTNPFLGLPLEYGNCESCGTSEPGKCEGHFGYIQLPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHP H+SELK IL L+C KC+R S A CS+C DLP +SIKEVKT+D
Sbjct: 83 YHPCHVSELKHILDLICLKCLRMKMRKVKETSGTERSSSAPCSYCPDLPQLSIKEVKTTD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLSA 540
GA L+L + SR+R +DGFWNFL R+GFRYGDG+ RTLLP E+L ILK IPEET+++L
Sbjct: 143 GACYLELKISSRSRSQDGFWNFLERYGFRYGDGSQRTLLPSESLEILKRIPEETRRKLIG 202
Query: 541 KGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGSP 720
KG F Q GY+LQYLPVPPNCL VP+ISDG S+MSSD+SI+ML++VL +IE+I+ SRSG+P
Sbjct: 203 KGHFPQYGYILQYLPVPPNCLSVPDISDGISIMSSDLSITMLRKVLKQIEIIRSSRSGAP 262
Query: 721 NFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFIS 900
NFES E+E N+LQ +A Y+H+RGT +A D+ +F + + +K WLEK+RTLFIS
Sbjct: 263 NFESQEIEANELQSTVANYLHVRGTAKASRDVDTRFSVSKGVNDTCTKAWLEKMRTLFIS 322
Query: 901 KGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYKD 1080
KGSGFSSRSVITGD+Y GIN+IGLPSE+A+R+TFEE+V++HN++ LQK+VDN+LC+TY D
Sbjct: 323 KGSGFSSRSVITGDAYKGINEIGLPSEVAQRITFEEKVSIHNMDHLQKLVDNKLCLTYTD 382
Query: 1081 GNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTVK 1260
G STY++ GS+G+T+L+VGQ++ R I+DGDIVFINRPPSTHKHSLQAF+VYVHDDHTVK
Sbjct: 383 GLSTYSLRDGSKGYTSLRVGQVVRRRIMDGDIVFINRPPSTHKHSLQAFSVYVHDDHTVK 442
Query: 1261 INPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSLL 1440
+NPL+C PLGADFDGDC+H+FYPQSL AK+EV+ELF+++ QLLSSHSG LN QL +DSLL
Sbjct: 443 VNPLICGPLGADFDGDCVHLFYPQSLEAKSEVLELFAVQHQLLSSHSGNLNLQLANDSLL 502
Query: 1441 SLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCIG 1620
SL ++ F K ++QQL MFV LP PA+ KA + +WT QILQ ALP D
Sbjct: 503 SLNILFKRFFFDKASSQQLGMFVPMGLPQPALLKAHHDDPVWTALQILQTALPSCFDSSE 562
Query: 1621 QSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEGF 1800
+ ++I+QSEILKF+FN+D LQ+S +II S+L KG ++AL + NSLQPLLME + S GF
Sbjct: 563 RRYLISQSEILKFDFNKDALQTSFNEIINSVLFQKGSKEALNVVNSLQPLLMEHIFSVGF 622
Query: 1801 SISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACILQ 1980
S+SL+DF++P ++ E+ ++ I LL LR Y+E++ELQVE +L+ +KVP+V IL+
Sbjct: 623 SVSLKDFSIPRAVTEELHKMVEVILPLLHHLRSEYNEMVELQVENHLRIVKVPVVKFILK 682
Query: 1981 LSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDKP 2160
S LG +IDSKS+SSI+KV DRGKLYS+ LV+ L S F SKY + D
Sbjct: 683 SSILGNLIDSKSDSSINKVVQQVGFLGLQFSDRGKLYSRTLVEALTSFFRSKYCVNRDGE 742
Query: 2161 SSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVCY 2340
S E++GL+ S +GL P+E VHSIS+REV++RSSRGLTEPG LFKNLMAILRDVV+CY
Sbjct: 743 SPESFGLISSCFFNGLNPYEELVHSISSREVLVRSSRGLTEPGTLFKNLMAILRDVVICY 802
Query: 2341 DGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTNS 2520
DGTVRNVC+NS+IQFEY D G S PAGEPVG+LAATAIS PAYKAVLDSS S NS
Sbjct: 803 DGTVRNVCNNSLIQFEYGADLGNTPPSFYPAGEPVGILAATAISNPAYKAVLDSSPSNNS 862
Query: 2521 SWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCAL 2700
SWE MKEILLC+A+++NDLIDRRV+LYLN+C CG +C+E AA VQN L+ V L A+
Sbjct: 863 SWELMKEILLCRASFKNDLIDRRVILYLNDCGCGGYYCKEKAAYIVQNHLKRVSLMDIAV 922
Query: 2701 DLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGH 2880
D SI+YQKQ P +S T +GLVGHIHLD M LK LN++ IL CQE +KK
Sbjct: 923 DFSIKYQKQCIFPGNSVTNAGLVGHIHLDKMSLKALNRSMADILKDCQETLNSFRKKKDQ 982
Query: 2881 LSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPIL 3060
L +I RR L SECC + P D SEFPCLQF + ++++ IM N +CPIL
Sbjct: 983 LGHILRRVLLLVSECCSVRLP-DKERSEFPCLQF-LWEDTSSDSIQRISKIMANKVCPIL 1040
Query: 3061 LDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVL 3240
L T +KGDP+V + NI+WT PD SWV +P + GEL LEVVV K A ++ GDAWR+VL
Sbjct: 1041 LGTNIKGDPQVLSANIMWTSPDVCSWVRNPCKIQNGELVLEVVVDKAAVKRTGDAWRVVL 1100
Query: 3241 DACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVG 3420
++CLPV+HL+DT RSIPYGI+QI+EL GISCAFDQ+VQRLS +RMV+KGV+KEHL+L
Sbjct: 1101 NSCLPVIHLVDTRRSIPYGIKQIQELLGISCAFDQAVQRLSSSVRMVTKGVLKEHLILAA 1160
Query: 3421 NNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSS 3600
N+MTCTGN+IGFN+ G+KAL RSL V VPFTEATL TP KCFE+AA+KCH D+L S+V+S
Sbjct: 1161 NSMTCTGNMIGFNSGGYKALLRSLNVHVPFTEATLFTPRKCFEKAAQKCHMDSLSSIVAS 1220
Query: 3601 VSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIE 3780
SWGKHV +GTG FE++W K ++ N+D DVYD L VR E D CLG +I+
Sbjct: 1221 CSWGKHVTVGTGAQFEILWNNK-EMGVNQDGEIDVYDFLQLVRGSNEGDSFTTCLGQEID 1279
Query: 3781 DFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D + + ++ LSP N+ KP F+D
Sbjct: 1280 DLELENEERELSLSPNVNTCFNKPVFDD 1307
>ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Setaria italica]
Length = 2038
Score = 1553 bits (4022), Expect = 0.0
Identities = 758/1292 (58%), Positives = 978/1292 (75%), Gaps = 4/1292 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EE+C +SINDCP++HPSQL NPFLGLPLEAGKCE+CG +EN CEGHFGYIELPVPI
Sbjct: 23 STEEEICTYSINDCPVNHPSQLANPFLGLPLEAGKCEACGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVA-TCSHCRDLPAISIKEVKTS 357
YHP HISEL+ +LSL+CFKC+R S +C +CRD+PA+S+KE KT+
Sbjct: 83 YHPCHISELRQLLSLICFKCLRIKKGKVNKQNGKETASATLSCYYCRDIPALSLKETKTT 142
Query: 358 DGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLEALNILKEIPEETKKRL 534
DGAI L+L P R M + WNFL ++GF YG R LLP EALNILK++P++T+++L
Sbjct: 143 DGAIRLELRAPPRKHMTERSWNFLDKYGFHYGGSAHSRLLLPEEALNILKKVPDDTRRKL 202
Query: 535 SAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSG 714
+A+G+ Q+GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSG
Sbjct: 203 AARGYTVQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSG 262
Query: 715 SPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLF 894
SPNFESHE E D+QLA+ +Y+HLRGTTR P D +++F +G D S+KQWLEK+RTLF
Sbjct: 263 SPNFESHEEESCDIQLAVGQYIHLRGTTRGPQDNSKRFAVGTDTAALSTKQWLEKMRTLF 322
Query: 895 ISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTY 1074
ISKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT N+ RLQ++VD LC+TY
Sbjct: 323 ISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDININRLQEVVDKGLCLTY 382
Query: 1075 KDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHT 1254
+DG TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHT
Sbjct: 383 RDGKDTYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHT 442
Query: 1255 VKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDS 1434
VKINPL+C+P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSGQ+N QL +DS
Sbjct: 443 VKINPLMCSPFSADFDGDCVHIYYPQSLAAKAEALELFSVEKQLISSHSGQVNLQLGNDS 502
Query: 1435 LLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDC 1614
L+++K M++ + L KE A QL MFV LP PAV K+ + WTI QI+Q ALP + C
Sbjct: 503 LVAMKAMSSRTMLSKELANQLAMFVPFSLPAPAVIKSIPA---WTITQIVQGALPAKLTC 559
Query: 1615 IGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSE 1794
G++H++ I+K + ++D +Q S D+++S+L KGP +AL N LQPLLME L +
Sbjct: 560 QGKTHLVRDGNIIKLDLDKDHVQDSFNDLVSSVLSEKGPGEALQFLNVLQPLLMEFLLLD 619
Query: 1795 GFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACI 1974
GFS++L+DFNVP ++L EV +IQ+ S +L Q R S ++ E++VE NLK +K I +
Sbjct: 620 GFSVTLKDFNVPKAILEEVHKNIQKQSLILEQSRFSKSQIAEMRVENNLKGVKQQISEFV 679
Query: 1975 LQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIRED 2154
++ S LG +ID K E+S+SKV GKLYS LV+D +S+FV+K+S D
Sbjct: 680 IKCSDLGLLIDPKKEASMSKVVQQLGFVGLQLYHEGKLYSSRLVEDCFSNFVNKHSDIGD 739
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ EAYGLV+SS HGL P+E VHSIS RE I+RSSRGLTEPG LFKNLMAILRDVV+
Sbjct: 740 EHPPEAYGLVQSSYFHGLNPYEELVHSISTREAIVRSSRGLTEPGTLFKNLMAILRDVVI 799
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN CSNSIIQ +Y+ D+ + S P GEPVGVLAATAISTPAY+AVLDSS S
Sbjct: 800 CYDGTVRNTCSNSIIQLKYKEDDETDFPSALPPGEPVGVLAATAISTPAYRAVLDSSQSN 859
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SWE MKEIL K Y+ND+ DR+V+L+LN+C C KKFC+E AAL VQ+CLR V L C
Sbjct: 860 NASWESMKEILQTKVGYKNDMKDRKVILFLNDCSCPKKFCKERAALTVQSCLRRVTLADC 919
Query: 2695 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 2874
A D+SIE+QKQI L +S A LVGHIHLD +L+ +N +T IL KC+E++ + +KK
Sbjct: 920 ATDISIEHQKQINLDETSEAAPTLVGHIHLDKAQLERINISTQDILQKCEEISGRYGKKK 979
Query: 2875 GHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINTI 3048
GHL ++F++ S+ +C +Q DG L PC+QFS+ + E++E ++++ +++
Sbjct: 980 GHLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQFSFSDDNTILSESVERAVNVIADSV 1039
Query: 3049 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 3228
C +LLDTI+KGDPR+ + IIW +ATSWV + TLKGE LE++V+K A + G AW
Sbjct: 1040 CSVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQNTLKGEPTLEIIVEKDEAVRNGYAW 1099
Query: 3229 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 3408
R V+DAC+PV++LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 1100 RTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTTVKMVAKGVLKDHL 1159
Query: 3409 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 3588
+LV N+MTCTGNLIGFNTSG+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1160 ILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1219
Query: 3589 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 3768
VVSS SWGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK G
Sbjct: 1220 VVSSCSWGKHAAIGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--AGYAFL 1276
Query: 3769 SDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ +++ DD+ LSPEP+ H KPTFED
Sbjct: 1277 DDVDYLVEENAVDDVCLSPEPDGTHGKPTFED 1308
>gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria italica]
Length = 2050
Score = 1545 bits (3999), Expect = 0.0
Identities = 758/1304 (58%), Positives = 978/1304 (75%), Gaps = 16/1304 (1%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EE+C +SINDCP++HPSQL NPFLGLPLEAGKCE+CG +EN CEGHFGYIELPVPI
Sbjct: 23 STEEEICTYSINDCPVNHPSQLANPFLGLPLEAGKCEACGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVA-TCSHCRDLPAISIKEVKTS 357
YHP HISEL+ +LSL+CFKC+R S +C +CRD+PA+S+KE KT+
Sbjct: 83 YHPCHISELRQLLSLICFKCLRIKKGKVNKQNGKETASATLSCYYCRDIPALSLKETKTT 142
Query: 358 DGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLEALNILKEIPEETKKRL 534
DGAI L+L P R M + WNFL ++GF YG R LLP EALNILK++P++T+++L
Sbjct: 143 DGAIRLELRAPPRKHMTERSWNFLDKYGFHYGGSAHSRLLLPEEALNILKKVPDDTRRKL 202
Query: 535 SAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSG 714
+A+G+ Q+GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSG
Sbjct: 203 AARGYTVQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSG 262
Query: 715 SPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLF 894
SPNFESHE E D+QLA+ +Y+HLRGTTR P D +++F +G D S+KQWLEK+RTLF
Sbjct: 263 SPNFESHEEESCDIQLAVGQYIHLRGTTRGPQDNSKRFAVGTDTAALSTKQWLEKMRTLF 322
Query: 895 ISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTY 1074
ISKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT N+ RLQ++VD LC+TY
Sbjct: 323 ISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDININRLQEVVDKGLCLTY 382
Query: 1075 KDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHT 1254
+DG TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHT
Sbjct: 383 RDGKDTYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHT 442
Query: 1255 VKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDS 1434
VKINPL+C+P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSGQ+N QL +DS
Sbjct: 443 VKINPLMCSPFSADFDGDCVHIYYPQSLAAKAEALELFSVEKQLISSHSGQVNLQLGNDS 502
Query: 1435 LLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDC 1614
L+++K M++ + L KE A QL MFV LP PAV K+ + WTI QI+Q ALP + C
Sbjct: 503 LVAMKAMSSRTMLSKELANQLAMFVPFSLPAPAVIKSIPA---WTITQIVQGALPAKLTC 559
Query: 1615 IGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSE 1794
G++H++ I+K + ++D +Q S D+++S+L KGP +AL N LQPLLME L +
Sbjct: 560 QGKTHLVRDGNIIKLDLDKDHVQDSFNDLVSSVLSEKGPGEALQFLNVLQPLLMEFLLLD 619
Query: 1795 GFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACI 1974
GFS++L+DFNVP ++L EV +IQ+ S +L Q R S ++ E++VE NLK +K I +
Sbjct: 620 GFSVTLKDFNVPKAILEEVHKNIQKQSLILEQSRFSKSQIAEMRVENNLKGVKQQISEFV 679
Query: 1975 LQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIRED 2154
++ S LG +ID K E+S+SKV GKLYS LV+D +S+FV+K+S D
Sbjct: 680 IKCSDLGLLIDPKKEASMSKVVQQLGFVGLQLYHEGKLYSSRLVEDCFSNFVNKHSDIGD 739
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ EAYGLV+SS HGL P+E VHSIS RE I+RSSRGLTEPG LFKNLMAILRDVV+
Sbjct: 740 EHPPEAYGLVQSSYFHGLNPYEELVHSISTREAIVRSSRGLTEPGTLFKNLMAILRDVVI 799
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN CSNSIIQ +Y+ D+ + S P GEPVGVLAATAISTPAY+AVLDSS S
Sbjct: 800 CYDGTVRNTCSNSIIQLKYKEDDETDFPSALPPGEPVGVLAATAISTPAYRAVLDSSQSN 859
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SWE MKEIL K Y+ND+ DR+V+L+LN+C C KKFC+E AAL VQ+CLR V L C
Sbjct: 860 NASWESMKEILQTKVGYKNDMKDRKVILFLNDCSCPKKFCKERAALTVQSCLRRVTLADC 919
Query: 2695 ALDLSIE------------YQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHK 2838
A D+SIE +QKQI L +S A LVGHIHLD +L+ +N +T IL K
Sbjct: 920 ATDISIEGERQKYVVCIFRHQKQINLDETSEAAPTLVGHIHLDKAQLERINISTQDILQK 979
Query: 2839 CQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDET 3012
C+E++ + +KKGHL ++F++ S+ +C +Q DG L PC+QFS+ + E+
Sbjct: 980 CEEISGRYGKKKGHLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQFSFSDDNTILSES 1039
Query: 3013 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 3192
+E ++++ +++C +LLDTI+KGDPR+ + IIW +ATSWV + TLKGE LE++V
Sbjct: 1040 VERAVNVIADSVCSVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQNTLKGEPTLEIIV 1099
Query: 3193 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 3372
+K A + G AWR V+DAC+PV++LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS +
Sbjct: 1100 EKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTTV 1159
Query: 3373 RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 3552
+MV+KGV+K+HL+LV N+MTCTGNLIGFNTSG+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 1160 KMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFEK 1219
Query: 3553 AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 3732
AAEKC +D+LG VVSS SWGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR
Sbjct: 1220 AAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1278
Query: 3733 PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
QEK G D++ +++ DD+ LSPEP+ H KPTFED
Sbjct: 1279 DQEK--AGYAFLDDVDYLVEENAVDDVCLSPEPDGTHGKPTFED 1320
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
Length = 1830
Score = 1538 bits (3982), Expect = 0.0
Identities = 758/1290 (58%), Positives = 975/1290 (75%), Gaps = 2/1290 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
AT +E+C S++DCPISH SQLTNPFLGLPLE GKCESCGTAE G CEGHFGYIELP+PI
Sbjct: 21 ATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCGTAEPGQCEGHFGYIELPIPI 80
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHP H+SELK +LSL+C KC++ + +A C C+D P +S++E + ++
Sbjct: 81 YHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGITEQL-LAPC--CQDSPQVSVREFRPTE 137
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLSA 540
GA L+L +PSR+R +DGFW+FLAR+G+RYG R LLP E + IL+ IPE+T+K+L
Sbjct: 138 GACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLSRILLPSEVMEILRRIPEDTRKKLVR 197
Query: 541 KGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGSP 720
KG+F Q+GY+LQYLPVPPNCL VP+ISDG S+MSSD+S+SMLK+VL +IE+IK SRSG P
Sbjct: 198 KGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEP 257
Query: 721 NFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFIS 900
NFESH++E N+LQ +I +Y+ +RGT + + +F ++ ++S+K WLEK+RTLFI
Sbjct: 258 NFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEPNESSTKAWLEKMRTLFIR 317
Query: 901 KGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYKD 1080
KGSGFSSRSVITGD+Y +N+IGLP EIA+R+TFEERV VHN++ LQ +VD +LC+TY+D
Sbjct: 318 KGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRD 377
Query: 1081 GNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTVK 1260
G STY++ GS+GHT L+ GQ+++R I+DGDIVFINRPP+THKHSLQA +VYVHDDHTVK
Sbjct: 378 GLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVK 437
Query: 1261 INPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSLL 1440
INPL+C PL ADFDGDC+H+FYPQSL AKAEV+ELFS+E+QLLSSHSG LN QL +DSLL
Sbjct: 438 INPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLL 497
Query: 1441 SLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCIG 1620
SLKV+ FL K AQQL MFVS LP PA+ K+ SG WT QILQ ALP DCIG
Sbjct: 498 SLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIG 557
Query: 1621 QSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEGF 1800
+ H I++S ILK ++NRD+LQS + +I+TSI KGP + L F+SLQPLLME L SEGF
Sbjct: 558 ERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGF 617
Query: 1801 SISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACILQ 1980
S+SLEDF++P+ + +Q ++++ISSLL LR Y+ELL+LQ E +L+ KVP+ IL
Sbjct: 618 SVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILN 677
Query: 1981 LSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIR-EDK 2157
SALG +IDSKS+S+I+KV ++GK YS+ LV+ + F SKY D
Sbjct: 678 SSALGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADY 737
Query: 2158 PSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVC 2337
PS E +GL++S HGL P+E VHSIS RE+I+RSSRGL+EPG LFKNLMAILRDVV+C
Sbjct: 738 PSGE-FGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVIC 796
Query: 2338 YDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTN 2517
YDGTVRNVCSNSIIQFEY + + PAGEPVGVLAATA+S PAYKAVLDSS S+N
Sbjct: 797 YDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSN 856
Query: 2518 SSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCA 2697
SSWE MKEILLC+ N++NDLIDRRV+LYLN+C CG+K+CRENAA V+N L+ LK A
Sbjct: 857 SSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTA 916
Query: 2698 LDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG 2877
++ IEY KQ + SS +GLVGHIHL+ + L+ LN + + KC+E RKK
Sbjct: 917 VEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSF-RKKK 975
Query: 2878 HLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPI 3057
++ F++ LS ECC Q S+ PCL F ++ G D+ LE +HI+ + ICP+
Sbjct: 976 NVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLF-FWQGNRDDNLEQILHILAHKICPV 1034
Query: 3058 LLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIV 3237
LL TI+KGD RV VNIIW PD T+W+ +P ++ KGELAL++V++K A +++GDAWRIV
Sbjct: 1035 LLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIV 1094
Query: 3238 LDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLV 3417
LDACLPV+HLIDT RSIPY I+Q++EL GISCAFDQ+VQRLSK + MV+KGV+KEHL+L+
Sbjct: 1095 LDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILL 1154
Query: 3418 GNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVS 3597
N+MTC GNLIGFN+ G+KAL R+L +QVPFTEATL TP KCFE+A+EKCHTD+L S+V+
Sbjct: 1155 ANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVA 1214
Query: 3598 SVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE-PQEKDLPGACLGSD 3774
S SWGKHV +GTG+ F+V+W K+ P +D G D+Y L VR K+ ACLG++
Sbjct: 1215 SCSWGKHVTVGTGSRFDVLWDTKEIGPA-QDGGIDIYSFLHLVRSGSYGKEPDTACLGAE 1273
Query: 3775 IEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
+ED + + +N ++ +SPE +S EKP FED
Sbjct: 1274 VEDLILEDENLELGMSPEHSSNFEKPVFED 1303
>gb|PAN04046.1| hypothetical protein PAHAL_A00310 [Panicum hallii]
Length = 1978
Score = 1530 bits (3961), Expect = 0.0
Identities = 746/1291 (57%), Positives = 965/1291 (74%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EE+C +SINDCP++HPSQL NPFLGLPLEAGKCE+CG +EN CEGHFGYIELPVPI
Sbjct: 23 STEEEICTYSINDCPVTHPSQLANPFLGLPLEAGKCEACGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHPSH+SEL+ +LSL+C KC+R + +C +CRD+PA+S+KE++T+D
Sbjct: 83 YHPSHVSELRQLLSLICLKCLRIKKGKVKQSKGKENGLATSCFYCRDVPALSLKEIRTTD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLEALNILKEIPEETKKRLS 537
GAI L+L P R M + WNFL ++G YG + R LLP EALNILK++P++T+++L+
Sbjct: 143 GAIRLELRAPPRKHMTERSWNFLDKYGHHYGGSSHERPLLPEEALNILKKVPDDTRRKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ Q+GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSGS
Sbjct: 203 ARGYTVQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFI 897
PNF+SHE E DLQLAI +Y+HLRGTTR P D T++F +G D+ S+KQWLEK+RTLFI
Sbjct: 263 PNFKSHEEESCDLQLAIGKYIHLRGTTRGPQDNTKRFAVGTDSAALSTKQWLEKMRTLFI 322
Query: 898 SKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYK 1077
SKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT N+ RLQ++VD LC+TY+
Sbjct: 323 SKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDININRLQEVVDKGLCLTYR 382
Query: 1078 DGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTV 1257
DG + YAI VGS+GHT LKVGQ I R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHTV
Sbjct: 383 DGQANYAITVGSKGHTTLKVGQTIRRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHTV 442
Query: 1258 KINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSL 1437
KINPL+C P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSG +N QL +DSL
Sbjct: 443 KINPLICGPFSADFDGDCVHIYYPQSLAAKAEALELFSVEKQLISSHSGTVNLQLGNDSL 502
Query: 1438 LSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCI 1617
+++K+M++ + L KE A QL MF+ LPPPAV K+ + WTI QI+Q ALP + C
Sbjct: 503 VAMKLMSSRTMLSKELANQLAMFIPFSLPPPAVIKSIPA---WTITQIVQGALPAKLTCQ 559
Query: 1618 GQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEG 1797
G++H+I S ++K + +D + S +D+++S+L KGP + L N LQPLLME L +G
Sbjct: 560 GKTHLIRDSTVIKLDLEKDCVHDSFSDLMSSLLSQKGPGEVLQFLNVLQPLLMEFLLLDG 619
Query: 1798 FSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACIL 1977
FS+SL+DFNVP ++ EVQ I++ S +L Q R S + +E++VE NLK IK I +
Sbjct: 620 FSVSLKDFNVPKAIYEEVQRHIRKQSLILEQSRFSKSQFVEMRVENNLKSIKQQISDFVA 679
Query: 1978 QLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDK 2157
+ S LG +ID K +S++SKV GKLYS LV+D +S+FV+K+S ++
Sbjct: 680 KCSDLGLLIDPKKDSAMSKVVQQLGFVGLQLYREGKLYSSRLVEDCFSNFVNKHSDIGEE 739
Query: 2158 PSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVC 2337
EAYGLV+SS HGL P+E VH+IS RE ++RSSRGLTEPG LFKNLMAILRDVV+C
Sbjct: 740 HPPEAYGLVQSSYFHGLNPYEELVHAISTREAMVRSSRGLTEPGTLFKNLMAILRDVVIC 799
Query: 2338 YDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTN 2517
YDGTVRN CSNSIIQ +Y+ D+ + S P GEPVGVLAATAIS PAYKAVLDSS S N
Sbjct: 800 YDGTVRNTCSNSIIQLKYKEDDETDFPSALPPGEPVGVLAATAISNPAYKAVLDSSQSNN 859
Query: 2518 SSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCA 2697
+SWE MKE L K Y ND+ DR+V+L+LN+C C KKFC+E AAL VQ+CLR V + C
Sbjct: 860 ASWESMKETLQAKTGYNNDMKDRKVILFLNDCSCSKKFCKERAALTVQSCLRRVTIADCT 919
Query: 2698 LDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG 2877
D+ IE+QKQI L +S A LVGHIHLD +L+ +N T IL KC+EV++ + +KKG
Sbjct: 920 TDICIEHQKQINLDGTSEAAPSLVGHIHLDKAQLERININTQDILQKCEEVSRRYGKKKG 979
Query: 2878 HLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINTIC 3051
HL ++ R+ ++ +C Q P DG L PC+QFS+ + E++E ++++ +++C
Sbjct: 980 HLCHLLRKITFATCDCSFGQNPVDGYLHMIPCVQFSFSDDNTILSESVERAVNVIADSVC 1039
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
+LLDTI+KGDPR+ A IIW DATSWV + +T KGE ALE++V+K A GDAWR
Sbjct: 1040 SVLLDTIIKGDPRIQAAKIIWVESDATSWVKNTRKTPKGEPALEIIVEKDEAVHNGDAWR 1099
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
+DAC+PV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MVSKGV+K+HL+
Sbjct: 1100 TTMDACIPVLNLIDTRRSIPYGIQQVRELLGISCAFDQVVQRLSTTVKMVSKGVLKDHLI 1159
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTGNL GFNT G+KA FRSLKVQVPFT +TL TPMKCFE+AAEKC +D+LG V
Sbjct: 1160 LVANSMTCTGNLYGFNTGGYKATFRSLKVQVPFTVSTLFTPMKCFEKAAEKCDSDSLGCV 1219
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS SWGKH A+GTG+ FE++W + Q+ N++ G +YD LA VR QEK G
Sbjct: 1220 VSSCSWGKHAAIGTGSSFEILWNE-NQLKTNKEYGDGLYDFLALVRTDQEK--AGYAFLD 1276
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ + + DD+ LSPEP+ KPTFED
Sbjct: 1277 DVDYLVAENAVDDVCLSPEPDGILGKPTFED 1307
>ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Oryza sativa
Japonica Group]
Length = 1962
Score = 1528 bits (3957), Expect = 0.0
Identities = 752/1290 (58%), Positives = 972/1290 (75%), Gaps = 2/1290 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T +E+ +SINDCP++HPSQL NPFLGLPLE GKCESCG +ENG CEGHFGYIELPVPI
Sbjct: 23 STEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCESCGASENGKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHP H++EL+ IL++VC KC+R + S +C +CRDLPA+S+KE+KT+D
Sbjct: 83 YHPCHVTELRQILNVVCLKCLRVKKGKVKQTEGKDNTSALSCYYCRDLPALSLKEIKTAD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLEALNILKEIPEETKKRLS 537
GA L+L +P R M +G WNFL ++GF +G + CRTLLP EALNILK+IPEETK++L+
Sbjct: 143 GAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRTLLPEEALNILKKIPEETKRKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS D+SIS+LK+VL KIE IK+SR+GS
Sbjct: 203 ARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLLKKVLQKIEQIKKSRAGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFI 897
PNFESHEVE DLQL+IA+Y+HLRGTTR P D T++F + D S+KQWLEK+RTLFI
Sbjct: 263 PNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFAISTDPSALSTKQWLEKMRTLFI 322
Query: 898 SKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYK 1077
SKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT NL RLQ++VD LC+TY+
Sbjct: 323 SKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDINLNRLQEIVDKGLCLTYR 382
Query: 1078 DGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTV 1257
DG +TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF VYVH+DHTV
Sbjct: 383 DGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFRVYVHEDHTV 442
Query: 1258 KINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSL 1437
KINPL+CAP ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL SSHSG++N QLVSDSL
Sbjct: 443 KINPLICAPFAADFDGDCVHIYYPQSLAAKAEALELFSVEKQLTSSHSGKVNLQLVSDSL 502
Query: 1438 LSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCI 1617
L+LK M++ + L KE A QL M V+ LP PAV K S WTI QI+Q ALP ++
Sbjct: 503 LALKHMSSRTMLSKEAANQLAMLVTCSLPDPAVIK---SKPYWTISQIVQGALPKALTSQ 559
Query: 1618 GQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEG 1797
G HV+ S I+K + +++ +Q+S +D++ S L KGP +AL N LQPLLME++ +G
Sbjct: 560 GDKHVVRDSTIIKLDLDKESVQTSFSDLVYSTLSVKGPGEALQFLNVLQPLLMELILLDG 619
Query: 1798 FSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACIL 1977
FS+SL+DFNVP +L E Q +I++ S +L Q R + ++++E++V+ NLK IK I ++
Sbjct: 620 FSVSLQDFNVPKVLLEEAQKNIEKQSLILEQSRFAENQVVEMRVDNNLKDIKQQISDFVV 679
Query: 1978 QLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDK 2157
+ S LG +ID KS+SS+SKV GK YS+ LV+D Y FV+K+ ++
Sbjct: 680 KRSHLGLLIDPKSDSSVSKVVQQLGFVGLQLYREGKFYSRRLVEDCYYTFVNKHPAVREE 739
Query: 2158 PSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVC 2337
S EAYGLV+SS HGL P+E VH+IS RE I+RSSRGLTEPG LFKNLMA+LRDVV+C
Sbjct: 740 HSPEAYGLVRSSYFHGLNPYEELVHAISTREAIVRSSRGLTEPGTLFKNLMALLRDVVIC 799
Query: 2338 YDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTN 2517
YDGTVRNVCS SIIQ Y D+ ++ S GEPVGVLAATAIS PAYKAVLD+S S N
Sbjct: 800 YDGTVRNVCSKSIIQLNYTEDDALDFPSAIGPGEPVGVLAATAISNPAYKAVLDASQSNN 859
Query: 2518 SSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCA 2697
+SWE+MKEIL + Y+ND+ DR+V+L+LN+C C KKFC+E AA+AVQ CLR + L+ CA
Sbjct: 860 TSWERMKEILQTTSRYKNDMKDRKVILFLNDCSCAKKFCKEKAAIAVQGCLRRITLEDCA 919
Query: 2698 LDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG 2877
D+ IEYQKQIGL +S A LVGHIHLD L+ +N +T+ IL KCQEV+ + +KKG
Sbjct: 920 TDICIEYQKQIGLDGTSEAAPALVGHIHLDRAHLERINISTEDILQKCQEVSGKYGKKKG 979
Query: 2878 HLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG-AVDETLEHGMHIMINTICP 3054
HLSN+F+ S+ +C +Q+ DG L + PCLQF V E++E + ++ +++C
Sbjct: 980 HLSNLFKNITFSTCDCLFTQKLVDGKLPKLPCLQFFVSDNMIVSESVERAVSVLADSLCG 1039
Query: 3055 ILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRI 3234
+LL+TI+KGDPR+ I+W G DATSWV + + KGE A+E++V++ A GDAWR
Sbjct: 1040 VLLNTIIKGDPRIQEAKIVWVGSDATSWVKNTQKASKGEPAVEIIVEEEEALHIGDAWRT 1099
Query: 3235 VLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVL 3414
+DAC+PV++LID RSIPYGIQQ++EL GISCAFDQ VQRLS +RMV+K V+K+HLVL
Sbjct: 1100 TMDACIPVLNLIDIRRSIPYGIQQVRELLGISCAFDQVVQRLSTTVRMVAKDVLKDHLVL 1159
Query: 3415 VGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVV 3594
V N+MT TGNL GFN +G+KA FRSLKVQVPFTE+TL+TPMKCFE+AAEKCH+D+LG VV
Sbjct: 1160 VANSMTFTGNLNGFNNAGYKATFRSLKVQVPFTESTLITPMKCFEKAAEKCHSDSLGCVV 1219
Query: 3595 SSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSD 3774
SS SWGKH A GTG+ F+++W + Q+ N++ G +YD LA VR +EK D
Sbjct: 1220 SSCSWGKHAASGTGSSFQILWNE-SQLKSNKEYGDGLYDYLALVRTDEEK---ARYTFFD 1275
Query: 3775 IEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D+L + D+ LSPE + +P F+D
Sbjct: 1276 DVDYLAEENEADVCLSPELDGTIGQPIFDD 1305
>ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Brachypodium
distachyon]
gb|KQJ92654.1| hypothetical protein BRADI_4g45065v3 [Brachypodium distachyon]
Length = 1954
Score = 1525 bits (3948), Expect = 0.0
Identities = 749/1293 (57%), Positives = 976/1293 (75%), Gaps = 5/1293 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T +E+ +SINDCP++HPSQL NPFLGLPLE GKCESCG +ENG CEGHFGYIELPVPI
Sbjct: 23 STEDEILTYSINDCPVTHPSQLGNPFLGLPLETGKCESCGASENGKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHP H+SEL+ +LSLVC KC+R +VSV CS+CRD+PA+S+KEVKT+D
Sbjct: 83 YHPCHVSELRQLLSLVCLKCLRIKKGKAKQSNGKENVSVTACSYCRDVPALSLKEVKTAD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLEALNILKEIPEETKKRLS 537
GA L+L P R M+D WNFL ++GF +G + RTLLP EALNILK+IP++T+K+L+
Sbjct: 143 GAFRLELRAPPRRLMKDSSWNFLDKYGFHHGGASHFRTLLPEEALNILKKIPDDTRKKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS D+SIS+LK++L++IE IK+SR+G+
Sbjct: 203 ARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLLKKILHRIEQIKKSRAGT 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFI 897
PNFESHE E +DLQ++IA+Y+HLRGTT+ P D T++F + D+ S+KQWLEK+RTLFI
Sbjct: 263 PNFESHEAESSDLQISIAQYIHLRGTTKGPQD-TKRFTISTDSSHLSTKQWLEKMRTLFI 321
Query: 898 SKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYK 1077
SKGSGFSSRSV+TGD Y G++ +GLPSE+AKR+TFEE+VT N++RLQ++VD LC+TY+
Sbjct: 322 SKGSGFSSRSVLTGDPYIGVDVVGLPSEVAKRITFEEQVTDINIKRLQEVVDKGLCLTYR 381
Query: 1078 DGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTV 1257
DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF VY+HDDHTV
Sbjct: 382 DGQTTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYVYIHDDHTV 441
Query: 1258 KINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSL 1437
KINPL+C+PL ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL +SH+G++N QL +DSL
Sbjct: 442 KINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELFSVEKQLTNSHNGKVNLQLSNDSL 501
Query: 1438 LSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCI 1617
L+LK M++ + L KE+A QL M +S LP PAV K WTI QI+Q ALP ++ C
Sbjct: 502 LALKHMSSRTVLSKESANQLAMLLSFSLPDPAVVKL---KPCWTITQIIQGALPAALTCE 558
Query: 1618 GQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEG 1797
G ++ S ++K + ++ +Q+S +D+++SIL KGP AL N+LQPLLME L +G
Sbjct: 559 GGRFLVKDSTVIKLDLAKESVQASFSDLVSSILCVKGPGGALQFLNALQPLLMEYLLLDG 618
Query: 1798 FSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACIL 1977
FS+SL+DFNVP +L EV SIQE S +L Q R S + +E++V+ NLK +K I ++
Sbjct: 619 FSVSLQDFNVPKVLLEEVHKSIQEQSLVLEQSRCSKSQFVEMRVDNNLKDVKQQISDFVV 678
Query: 1978 QLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKY-SIRED 2154
+ S LG +ID KSE S+SKV GK YS LV+D +S FV K+ I +
Sbjct: 679 ESSHLGLLIDPKSEPSMSKVVQQLGFVGLQLYREGKFYSSRLVEDCFSSFVDKHPPIVGN 738
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ EAYGLV++S HGL P+E VHSIS RE I+RSSRGLTEPG LFKNLMAILRDVV+
Sbjct: 739 QHPPEAYGLVQNSYFHGLNPYEELVHSISTREAIVRSSRGLTEPGTLFKNLMAILRDVVI 798
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN+CSNSI+Q +Y D+ + S GEPVGVLAATAIS PAYKAVLD+S S
Sbjct: 799 CYDGTVRNICSNSIMQLKYNEDDATDIPSALTPGEPVGVLAATAISNPAYKAVLDASQSN 858
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SW MKEIL K +Y+ND DR+V+L+LN+C C KKFC+E AA+AVQN L+ V L+ C
Sbjct: 859 NTSWASMKEILQTKVSYKNDTNDRKVILFLNDCSCPKKFCKEKAAIAVQNRLKRVTLEDC 918
Query: 2695 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 2874
A D+ IEY KQI L SS LVGHIHL+ RL ++N +T+ IL KCQEV+ H +KK
Sbjct: 919 ATDICIEYHKQI-LDGSSEATPALVGHIHLEKARLDMINVSTEDILQKCQEVSLKHGKKK 977
Query: 2875 GHLSNIFRRTFLSSSECCGSQQPN-DGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINT 3045
GHL ++F++ S+ +C +Q+P DG L + PCLQFS+ + E++E + ++ N+
Sbjct: 978 GHLGHLFKKITFSTCDCSFTQKPMIDGKLPKVPCLQFSFSEDIPMLSESVERAVSVLANS 1037
Query: 3046 ICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDA 3225
+C +LLDTI+KGDPR+ I+W G DA SWV + + KGE +E+VV+K A K+GDA
Sbjct: 1038 LCDVLLDTIIKGDPRIQEAKIMWVGSDAQSWVKNTRKVSKGEPTVEIVVEKNEASKQGDA 1097
Query: 3226 WRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEH 3405
WRI +DAC+PV+ LIDT RSIPYGIQQ++EL GISC+FDQ VQRLS ++ V+KG++K+H
Sbjct: 1098 WRIAMDACIPVIDLIDTRRSIPYGIQQVRELLGISCSFDQIVQRLSTTMKTVAKGILKDH 1157
Query: 3406 LVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALG 3585
L+LV N+MTCTGNL GFNT G++A FR+LKVQVPFTE+TL TPMKCFE+AAEKCH+DALG
Sbjct: 1158 LILVANSMTCTGNLYGFNTGGYRATFRALKVQVPFTESTLFTPMKCFEKAAEKCHSDALG 1217
Query: 3586 SVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACL 3765
VVSS SWGKH ALGTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1218 CVVSSCSWGKHAALGTGSSFQILWNE-NQLKSNKEYGDGLYDFLAMVRTDQEK--ARYTF 1274
Query: 3766 GSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ ++D DD+ LSPE N H PTFED
Sbjct: 1275 LDDVDYLVEDNAMDDICLSPELNGTHGVPTFED 1307
>dbj|GAV75269.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/DUF3223 domain-containing
protein [Cephalotus follicularis]
Length = 1964
Score = 1524 bits (3945), Expect = 0.0
Identities = 746/1289 (57%), Positives = 965/1289 (74%), Gaps = 1/1289 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
A+ +E+C SI+D PISH SQLTNPFLGLPL+ GKCESCGT+E G CEGHFGYIELP+PI
Sbjct: 22 ASRQEICTASISDAPISHASQLTNPFLGLPLQFGKCESCGTSEPGKCEGHFGYIELPIPI 81
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXX-SDVSVATCSHCRDLPAISIKEVKTS 357
YHPSHISELK +LSL+C KC++ ++ +++C C P +S+KEVKT+
Sbjct: 82 YHPSHISELKRMLSLLCLKCLKMRKNKVPLKTGGIAERLLSSC--CEGSPQVSVKEVKTT 139
Query: 358 DGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEALNILKEIPEETKKRLS 537
DGA L+L +PSR+R +DGFWNFL R+GF YGDG+ RTLLP E + ILK IP+ET+KRL+
Sbjct: 140 DGAFYLELKLPSRSRPQDGFWNFLERYGFHYGDGSTRTLLPCEVMEILKRIPQETRKRLA 199
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
KG+F Q+GYV+ YLPVPPNCL VPE+SDG SVMSSD+SISMLK+V+ ++E+IK SRSG+
Sbjct: 200 GKGYFPQDGYVIHYLPVPPNCLSVPEVSDGVSVMSSDLSISMLKKVIKQVEIIKSSRSGT 259
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGKNSSKQWLEKIRTLFI 897
PNFESHEVE NDLQ A+ +Y+ +RGT+R D+ +F + +++ +S+K WLEK+RTLFI
Sbjct: 260 PNFESHEVEANDLQSAVDQYLQVRGTSRGSRDVDTRFGVKKESSTSSTKAWLEKMRTLFI 319
Query: 898 SKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTYK 1077
KGSGFSSRSVITGD+Y G+N+IG+P EIA+R+TFEERV +HN++ LQ +VDN+LC+TY+
Sbjct: 320 RKGSGFSSRSVITGDAYKGVNEIGIPLEIAQRITFEERVNMHNMKYLQDLVDNKLCLTYR 379
Query: 1078 DGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHTV 1257
DG+STY++ GS+GHT L+ GQ+++R I+DGD VFINRPP+THKHSLQA VYVH DHTV
Sbjct: 380 DGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQALAVYVHHDHTV 439
Query: 1258 KINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDSL 1437
KINPL+C PL ADFDGDC+H+FYPQSLAAKAEV+ELFS+E+QL SSHSG LN QL +DSL
Sbjct: 440 KINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLCSSHSGNLNLQLATDSL 499
Query: 1438 LSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDCI 1617
LSLK+M T+ L++ A+QL MFVS LP PA+ KA + G WT Q+LQ +P DC
Sbjct: 500 LSLKLMFKTNLLKRAAAEQLAMFVSLSLPRPALLKAHSCGPCWTALQLLQTVMPSEFDCE 559
Query: 1618 GQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSEG 1797
G +++I++SEIL +FNR+++QS + +I+TSI KGP L FN LQPLLME L EG
Sbjct: 560 GDNYMISKSEILVADFNREVVQSVMNEIVTSIFFEKGPAAVLRFFNWLQPLLMESLFGEG 619
Query: 1798 FSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACIL 1977
FS+SLEDF + + L + I IS LL +LR +Y+E +ELQ+E +++ K P+ IL
Sbjct: 620 FSVSLEDFYISKASLEYIHQDINVISPLLGRLRSTYNERVELQLENHIRLTKDPVAHFIL 679
Query: 1978 QLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIREDK 2157
+ SALG +IDSKS+SS++KV D+GK YSK L +D+ SHF SKY
Sbjct: 680 KSSALGDLIDSKSDSSVNKVVQQIGFLGLQLSDKGKFYSKTLFEDVGSHFESKYPSHIVD 739
Query: 2158 PSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVVC 2337
S YGLVK HGL P+E +HSIS REVI+RSSRGL+EPG LFKNLMAILRDVV+C
Sbjct: 740 YPSVKYGLVKGCFFHGLDPYEEMIHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVIC 799
Query: 2338 YDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNSTN 2517
YDGTVRNV SNSIIQFEY ++ G S S+ P GEPVGVLAATA+S PAYKAVLDS+ S+N
Sbjct: 800 YDGTVRNVSSNSIIQFEYGVNTGTRSQSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSN 859
Query: 2518 SSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHCA 2697
SSWEQMKEILLC+ N++NDL DRR +LYLN+C CG+K+CRENAA ++N L+ V LK
Sbjct: 860 SSWEQMKEILLCRVNFKNDLTDRRAILYLNDCDCGRKYCRENAAFFIKNQLKKVSLKDTT 919
Query: 2698 LDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKG 2877
++ IEY++Q + S T +G+VGH+HL+ M LK LN T IL KC E + RKK
Sbjct: 920 IEFMIEYKQQQSVSESIDTDAGIVGHVHLNKMLLKELNITMQDILQKCLETVKSF-RKKK 978
Query: 2878 HLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPI 3057
++ +F+ T LS SECC Q S+ PCL F ++ + LE H + + I P+
Sbjct: 979 KVATLFKDTHLSVSECCSFHQFGAEKSSDMPCLMF-FWHERNEIHLERTSHYLADIIYPV 1037
Query: 3058 LLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIV 3237
LL+TIVKGDPR+ +V IIW PD+T+W+ +P + KGELAL+VV++K ++ GDAWR++
Sbjct: 1038 LLETIVKGDPRISSVTIIWVSPDSTTWIRNPSQVRKGELALDVVLEKSVVKQSGDAWRVL 1097
Query: 3238 LDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLV 3417
LD+CLPV+HLIDTTRSIP I++++EL GISCAF Q+VQRL+ ++MV+KG++KEHL+L+
Sbjct: 1098 LDSCLPVLHLIDTTRSIPSAIKEVQELLGISCAFSQAVQRLATSVKMVAKGILKEHLILL 1157
Query: 3418 GNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVS 3597
N+MTC GNLIGFN+ G+KAL RS +QVPFTEAT TP KCFERAAEKCH D L S+V+
Sbjct: 1158 ANSMTCAGNLIGFNSGGYKALLRSFNIQVPFTEATHFTPRKCFERAAEKCHVDTLASIVA 1217
Query: 3598 SVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDI 3777
S SWGKHV+LGTG+ F+++W ++ N+ DVY+ L VR ++ ACLG+DI
Sbjct: 1218 SCSWGKHVSLGTGSRFDILW-DTREAKLNQQGKTDVYNFLHMVRSADREEPTTACLGADI 1276
Query: 3778 EDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
+D D +N D SP NS +KP FED
Sbjct: 1277 DDLELDGENVDWIASPVHNSGVDKPVFED 1305
>ref|XP_021314141.1| DNA-directed RNA polymerase V subunit 1 isoform X2 [Sorghum bicolor]
Length = 1982
Score = 1522 bits (3940), Expect = 0.0
Identities = 749/1292 (57%), Positives = 968/1292 (74%), Gaps = 4/1292 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EEVC +S+N+CP++HPSQL NPFLGLPLEAGKCESCG +EN CEGHFGYIELPVPI
Sbjct: 23 STGEEVCTYSVNECPVTHPSQLGNPFLGLPLEAGKCESCGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
+HP H+SEL+ +LSL+C KC+R ++S CS+CRD+PA+S+KEVKT+D
Sbjct: 83 FHPCHVSELRQLLSLICLKCLRIKKGKVKQSNGKGNLSATLCSYCRDIPALSVKEVKTAD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGD-GTCRTLLPLEALNILKEIPEETKKRLS 537
GAI L+LS P + M + WNFL ++GF +G R+LLP EALNILK++P++T+++L+
Sbjct: 143 GAIRLELSAPHKRHMTERSWNFLDKYGFHHGGCSQFRSLLPEEALNILKKVPDDTRRKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSGS
Sbjct: 203 ARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-DAGKNSSKQWLEKIRTLF 894
PNF+SH+ E DLQLAI +Y+ LRGTTR P D T++F +G D+ S+KQWLEK+RTLF
Sbjct: 263 PNFDSHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSADSAALSTKQWLEKMRTLF 322
Query: 895 ISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTY 1074
ISKGSGFSSRSV+TGD Y G+ +GLPSE+AKR+TFEE+VT N+ RLQ++VD LC+TY
Sbjct: 323 ISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDININRLQEVVDKGLCLTY 382
Query: 1075 KDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHT 1254
+DG +TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHT
Sbjct: 383 RDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHT 442
Query: 1255 VKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDS 1434
VKINPL+C P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSG++N QL +D
Sbjct: 443 VKINPLMCGPFSADFDGDCVHIYYPQSLAAKAEALELFSVERQLISSHSGKVNLQLGNDC 502
Query: 1435 LLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDC 1614
L+++K M+ + L KE A QL MFV L PAV K S WTI QI+Q ALP + C
Sbjct: 503 LVAMKAMSDRTVLHKELANQLAMFVPFSLLAPAVMKPIPS---WTITQIVQGALPAKLTC 559
Query: 1615 IGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSE 1794
G +H++ S I+K + +++ +Q S D+++SIL KGPR+AL N L+PLLME L
Sbjct: 560 QGDTHLVRDSTIIKLDLDKESVQDSFPDLVSSILREKGPREALQFLNVLEPLLMEFLVLG 619
Query: 1795 GFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACI 1974
G SISL DFNVP ++L E Q +IQ S +L Q R S + +EL+VE NLK +K I +
Sbjct: 620 GLSISLRDFNVPKALLEEAQKNIQNQSLVLEQSRCSTSQFVELRVENNLKSVKQQISDYV 679
Query: 1975 LQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIRED 2154
+ S LG +ID K E+S++KV GKLYS+ LV+D +S FV+K+S D
Sbjct: 680 GKFSGLGLLIDPKKEASMAKVVQQVGFVGLQLYREGKLYSRRLVEDCFSSFVNKHSAIGD 739
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ S EA+GLV+SS HGL P+E VH+I RE +IRSSRGL+EPG LFKNLMAILRDVV+
Sbjct: 740 EYSPEAFGLVQSSYFHGLNPYEELVHAICTRETMIRSSRGLSEPGTLFKNLMAILRDVVI 799
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN+CSNSIIQ +Y D+ +S S P GEPVGVLAATAIS PAYKAVLDSS S
Sbjct: 800 CYDGTVRNICSNSIIQLKYGEDDEADSSSAVPPGEPVGVLAATAISNPAYKAVLDSSQSN 859
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SWE MKEIL + +Y+ND DR+VVL+L++C C KKFC+E AALAVQ+CL+ V L C
Sbjct: 860 NASWESMKEILQTRTSYKNDAKDRKVVLFLSDCSCAKKFCKERAALAVQSCLKRVTLGDC 919
Query: 2695 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 2874
A D+ IE+QKQI L +S A LVGHIHLD +L+ +N + IL KCQEV+ + +KK
Sbjct: 920 ATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGQLERINISIQDILQKCQEVSGRYGKKK 979
Query: 2875 GHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAVDETLEHGMHIMINTI 3048
GHL ++ ++ ++ +C +Q P G L + PC+QFS+ + + E++E ++++ +++
Sbjct: 980 GHLCHLLKKITFATCDCSFTQMPISGKLHKVPCVQFSFSDESTVLSESVERAVNVIADSV 1039
Query: 3049 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 3228
C +LLDTI+KGDPR+ A +IW DAT+WV + + KGE ALE++V+K A GDAW
Sbjct: 1040 CSVLLDTIIKGDPRIQAAKVIWVESDATAWVKNTRKVSKGEPALEIIVEKDHAVSNGDAW 1099
Query: 3229 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 3408
R +DACLPV+ LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 1100 RTTIDACLPVLDLIDTRRSIPYGIQQVKELIGISCAFDQVVQRLSSTVKMVNKGVLKDHL 1159
Query: 3409 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 3588
+LV N+MTCTG+LIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1160 ILVANSMTCTGSLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1219
Query: 3589 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 3768
VVSS SWGKH A+GTG+ F+++W + Q+ N+D G +YD LA VR QEK G
Sbjct: 1220 VVSSSSWGKHAAVGTGSSFQILWNE-NQLKSNKDYGDGLYDFLALVRTDQEK--TGYMFL 1276
Query: 3769 SDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ L++ DDM LSPEP+ KPTFED
Sbjct: 1277 DDVDYLLEENAIDDMCLSPEPDGTVGKPTFED 1308
>ref|XP_021314138.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
ref|XP_021314139.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
ref|XP_021314140.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
ref|XP_021314142.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
gb|OQU84386.1| hypothetical protein SORBI_3004G043750 [Sorghum bicolor]
gb|OQU84387.1| hypothetical protein SORBI_3004G043750 [Sorghum bicolor]
Length = 2015
Score = 1522 bits (3940), Expect = 0.0
Identities = 749/1292 (57%), Positives = 968/1292 (74%), Gaps = 4/1292 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EEVC +S+N+CP++HPSQL NPFLGLPLEAGKCESCG +EN CEGHFGYIELPVPI
Sbjct: 23 STGEEVCTYSVNECPVTHPSQLGNPFLGLPLEAGKCESCGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
+HP H+SEL+ +LSL+C KC+R ++S CS+CRD+PA+S+KEVKT+D
Sbjct: 83 FHPCHVSELRQLLSLICLKCLRIKKGKVKQSNGKGNLSATLCSYCRDIPALSVKEVKTAD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGD-GTCRTLLPLEALNILKEIPEETKKRLS 537
GAI L+LS P + M + WNFL ++GF +G R+LLP EALNILK++P++T+++L+
Sbjct: 143 GAIRLELSAPHKRHMTERSWNFLDKYGFHHGGCSQFRSLLPEEALNILKKVPDDTRRKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSGS
Sbjct: 203 ARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-DAGKNSSKQWLEKIRTLF 894
PNF+SH+ E DLQLAI +Y+ LRGTTR P D T++F +G D+ S+KQWLEK+RTLF
Sbjct: 263 PNFDSHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSADSAALSTKQWLEKMRTLF 322
Query: 895 ISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTY 1074
ISKGSGFSSRSV+TGD Y G+ +GLPSE+AKR+TFEE+VT N+ RLQ++VD LC+TY
Sbjct: 323 ISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDININRLQEVVDKGLCLTY 382
Query: 1075 KDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHT 1254
+DG +TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHT
Sbjct: 383 RDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHT 442
Query: 1255 VKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDS 1434
VKINPL+C P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSG++N QL +D
Sbjct: 443 VKINPLMCGPFSADFDGDCVHIYYPQSLAAKAEALELFSVERQLISSHSGKVNLQLGNDC 502
Query: 1435 LLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDC 1614
L+++K M+ + L KE A QL MFV L PAV K S WTI QI+Q ALP + C
Sbjct: 503 LVAMKAMSDRTVLHKELANQLAMFVPFSLLAPAVMKPIPS---WTITQIVQGALPAKLTC 559
Query: 1615 IGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSE 1794
G +H++ S I+K + +++ +Q S D+++SIL KGPR+AL N L+PLLME L
Sbjct: 560 QGDTHLVRDSTIIKLDLDKESVQDSFPDLVSSILREKGPREALQFLNVLEPLLMEFLVLG 619
Query: 1795 GFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACI 1974
G SISL DFNVP ++L E Q +IQ S +L Q R S + +EL+VE NLK +K I +
Sbjct: 620 GLSISLRDFNVPKALLEEAQKNIQNQSLVLEQSRCSTSQFVELRVENNLKSVKQQISDYV 679
Query: 1975 LQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIRED 2154
+ S LG +ID K E+S++KV GKLYS+ LV+D +S FV+K+S D
Sbjct: 680 GKFSGLGLLIDPKKEASMAKVVQQVGFVGLQLYREGKLYSRRLVEDCFSSFVNKHSAIGD 739
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ S EA+GLV+SS HGL P+E VH+I RE +IRSSRGL+EPG LFKNLMAILRDVV+
Sbjct: 740 EYSPEAFGLVQSSYFHGLNPYEELVHAICTRETMIRSSRGLSEPGTLFKNLMAILRDVVI 799
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN+CSNSIIQ +Y D+ +S S P GEPVGVLAATAIS PAYKAVLDSS S
Sbjct: 800 CYDGTVRNICSNSIIQLKYGEDDEADSSSAVPPGEPVGVLAATAISNPAYKAVLDSSQSN 859
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SWE MKEIL + +Y+ND DR+VVL+L++C C KKFC+E AALAVQ+CL+ V L C
Sbjct: 860 NASWESMKEILQTRTSYKNDAKDRKVVLFLSDCSCAKKFCKERAALAVQSCLKRVTLGDC 919
Query: 2695 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 2874
A D+ IE+QKQI L +S A LVGHIHLD +L+ +N + IL KCQEV+ + +KK
Sbjct: 920 ATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGQLERINISIQDILQKCQEVSGRYGKKK 979
Query: 2875 GHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAVDETLEHGMHIMINTI 3048
GHL ++ ++ ++ +C +Q P G L + PC+QFS+ + + E++E ++++ +++
Sbjct: 980 GHLCHLLKKITFATCDCSFTQMPISGKLHKVPCVQFSFSDESTVLSESVERAVNVIADSV 1039
Query: 3049 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 3228
C +LLDTI+KGDPR+ A +IW DAT+WV + + KGE ALE++V+K A GDAW
Sbjct: 1040 CSVLLDTIIKGDPRIQAAKVIWVESDATAWVKNTRKVSKGEPALEIIVEKDHAVSNGDAW 1099
Query: 3229 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 3408
R +DACLPV+ LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 1100 RTTIDACLPVLDLIDTRRSIPYGIQQVKELIGISCAFDQVVQRLSSTVKMVNKGVLKDHL 1159
Query: 3409 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 3588
+LV N+MTCTG+LIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1160 ILVANSMTCTGSLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1219
Query: 3589 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 3768
VVSS SWGKH A+GTG+ F+++W + Q+ N+D G +YD LA VR QEK G
Sbjct: 1220 VVSSSSWGKHAAVGTGSSFQILWNE-NQLKSNKDYGDGLYDFLALVRTDQEK--TGYMFL 1276
Query: 3769 SDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ L++ DDM LSPEP+ KPTFED
Sbjct: 1277 DDVDYLLEENAIDDMCLSPEPDGTVGKPTFED 1308
>gb|AQK60576.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1906
Score = 1518 bits (3930), Expect = 0.0
Identities = 745/1291 (57%), Positives = 965/1291 (74%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EE+C +SIN+CP++HPSQL NPFLGLPLEAGKCESCG +EN CEGHFGYIELPVPI
Sbjct: 23 STGEEICTYSINECPVTHPSQLGNPFLGLPLEAGKCESCGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHP H++EL+ +LSL+C KC+R + + CS+CRD+PA+S+KE+KT+D
Sbjct: 83 YHPCHVTELRQLLSLICLKCLRIKKGKVKQSNGKGNAAPTLCSYCRDIPALSLKEIKTTD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLEALNILKEIPEETKKRLS 537
GAI L+L P M + WNFL ++GF +G + RTLLP EALNILK++P++T+++L+
Sbjct: 143 GAIRLELRAPHNKHMTERSWNFLDKYGFHHGGCSHHRTLLPEEALNILKKVPDDTRRKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSGS
Sbjct: 203 ARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-DAGKNSSKQWLEKIRTLF 894
PNFESH+ E DLQLAI +Y+ LRGTTR P D T++F +G D+ S+KQWLEK+RTLF
Sbjct: 263 PNFESHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSADSAALSTKQWLEKMRTLF 322
Query: 895 ISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTY 1074
ISKGSGFSSRSV+TGD Y G+ +GLPSE+AKR+TFEE+VT N+ RLQ +VD LC+TY
Sbjct: 323 ISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDININRLQDVVDKGLCLTY 382
Query: 1075 KDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHT 1254
+DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHT
Sbjct: 383 RDGQATYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHT 442
Query: 1255 VKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDS 1434
VKINPL+C P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSG++N QL +DS
Sbjct: 443 VKINPLMCGPFSADFDGDCVHIYYPQSLAAKAEALELFSVERQLISSHSGKVNLQLGNDS 502
Query: 1435 LLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDC 1614
L+++K M+ T+ L KE A QL MFV L PAV K S WTI QI+Q A P ++ C
Sbjct: 503 LVAMKAMSHTTMLHKELANQLAMFVPFSLLAPAVIKPVPS---WTISQIVQGAFPANLTC 559
Query: 1615 IGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSE 1794
G +H++ S I++ + ++ +Q S D+++SIL KGP++AL N L+PLLME L +
Sbjct: 560 QGDTHLVRDSTIIRLDLGKESVQDSFPDLVSSILREKGPKEALQFLNVLEPLLMEFLLLD 619
Query: 1795 GFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACI 1974
G SISL DFNVP ++L E Q I+ S +L Q R S + +E +VE NLK +K I +
Sbjct: 620 GLSISLRDFNVPKALLEEAQKDIRNQSLILEQSRCSTSQFVEFRVENNLKNVKQQISDSV 679
Query: 1975 LQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIRED 2154
+ S LG +ID K E+S+SKV GKLYS+ LV+D +++FV+K+ D
Sbjct: 680 GKFSDLGLLIDPKKEASMSKVVQQVGFVGLQLYREGKLYSRRLVEDCFTNFVNKHLAIGD 739
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ EAYGLV+SS HGL P+E +H+IS RE +IRSSRGL+EPG LFKNLMAILRDVV+
Sbjct: 740 EYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTLFKNLMAILRDVVI 799
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN+CSNSIIQ +Y D+ +S SV P GEPVGVLAATAIS PAYKAVLDSS S
Sbjct: 800 CYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISNPAYKAVLDSSQSN 859
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SWE MKEIL + +Y+ND+ DR+VVL+LN+C C KKFC+E AALAVQ+CL+ V L C
Sbjct: 860 NASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALAVQSCLKRVTLGDC 919
Query: 2695 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 2874
A D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +KK
Sbjct: 920 ATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKKK 979
Query: 2875 GHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTIC 3051
GHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++C
Sbjct: 980 GHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSVC 1039
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
+LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAWR
Sbjct: 1040 SVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAWR 1099
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
+DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL+
Sbjct: 1100 TAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHLI 1159
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG V
Sbjct: 1160 LVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCV 1219
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1220 VSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFLD 1276
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ +++ DDM LSPEP+ KPTFED
Sbjct: 1277 DVDYLVEENAADDMCLSPEPDGTLGKPTFED 1307
>gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial [Zea mays]
Length = 1436
Score = 1518 bits (3930), Expect = 0.0
Identities = 745/1291 (57%), Positives = 965/1291 (74%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EE+C +SIN+CP++HPSQL NPFLGLPLEAGKCESCG +EN CEGHFGYIELPVPI
Sbjct: 23 STGEEICTYSINECPVTHPSQLGNPFLGLPLEAGKCESCGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHP H++EL+ +LSL+C KC+R + + CS+CRD+PA+S+KE+KT+D
Sbjct: 83 YHPCHVTELRQLLSLICLKCLRIKKGKVKQSNGKGNAAPTLCSYCRDIPALSLKEIKTTD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLEALNILKEIPEETKKRLS 537
GAI L+L P M + WNFL ++GF +G + RTLLP EALNILK++P++T+++L+
Sbjct: 143 GAIRLELRAPHNKHMTERSWNFLDKYGFHHGGCSHHRTLLPEEALNILKKVPDDTRRKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSGS
Sbjct: 203 ARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-DAGKNSSKQWLEKIRTLF 894
PNFESH+ E DLQLAI +Y+ LRGTTR P D T++F +G D+ S+KQWLEK+RTLF
Sbjct: 263 PNFESHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSADSAALSTKQWLEKMRTLF 322
Query: 895 ISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTY 1074
ISKGSGFSSRSV+TGD Y G+ +GLPSE+AKR+TFEE+VT N+ RLQ +VD LC+TY
Sbjct: 323 ISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDININRLQDVVDKGLCLTY 382
Query: 1075 KDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHT 1254
+DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHT
Sbjct: 383 RDGQATYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHT 442
Query: 1255 VKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDS 1434
VKINPL+C P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSG++N QL +DS
Sbjct: 443 VKINPLMCGPFSADFDGDCVHIYYPQSLAAKAEALELFSVERQLISSHSGKVNLQLGNDS 502
Query: 1435 LLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDC 1614
L+++K M+ T+ L KE A QL MFV L PAV K S WTI QI+Q A P ++ C
Sbjct: 503 LVAMKAMSHTTMLHKELANQLAMFVPFSLLAPAVIKPVPS---WTISQIVQGAFPANLTC 559
Query: 1615 IGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSE 1794
G +H++ S I++ + ++ +Q S D+++SIL KGP++AL N L+PLLME L +
Sbjct: 560 QGDTHLVRDSTIIRLDLGKESVQDSFPDLVSSILREKGPKEALQFLNVLEPLLMEFLLLD 619
Query: 1795 GFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACI 1974
G SISL DFNVP ++L E Q I+ S +L Q R S + +E +VE NLK +K I +
Sbjct: 620 GLSISLRDFNVPKALLEEAQKDIRNQSLILEQSRCSTSQFVEFRVENNLKNVKQQISDSV 679
Query: 1975 LQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIRED 2154
+ S LG +ID K E+S+SKV GKLYS+ LV+D +++FV+K+ D
Sbjct: 680 GKFSDLGLLIDPKKEASMSKVVQQVGFVGLQLYREGKLYSRRLVEDCFTNFVNKHLAIGD 739
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ EAYGLV+SS HGL P+E +H+IS RE +IRSSRGL+EPG LFKNLMAILRDVV+
Sbjct: 740 EYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTLFKNLMAILRDVVI 799
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN+CSNSIIQ +Y D+ +S SV P GEPVGVLAATAIS PAYKAVLDSS S
Sbjct: 800 CYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISNPAYKAVLDSSQSN 859
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SWE MKEIL + +Y+ND+ DR+VVL+LN+C C KKFC+E AALAVQ+CL+ V L C
Sbjct: 860 NASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALAVQSCLKRVTLGDC 919
Query: 2695 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 2874
A D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +KK
Sbjct: 920 ATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKKK 979
Query: 2875 GHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTIC 3051
GHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++C
Sbjct: 980 GHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSVC 1039
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
+LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAWR
Sbjct: 1040 SVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAWR 1099
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
+DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL+
Sbjct: 1100 TAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHLI 1159
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG V
Sbjct: 1160 LVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCV 1219
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1220 VSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFLD 1276
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ +++ DDM LSPEP+ KPTFED
Sbjct: 1277 DVDYLVEENAADDMCLSPEPDGTLGKPTFED 1307
>gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1465
Score = 1518 bits (3930), Expect = 0.0
Identities = 745/1291 (57%), Positives = 965/1291 (74%), Gaps = 3/1291 (0%)
Frame = +1
Query: 1 ATFEEVCKFSINDCPISHPSQLTNPFLGLPLEAGKCESCGTAENGNCEGHFGYIELPVPI 180
+T EE+C +SIN+CP++HPSQL NPFLGLPLEAGKCESCG +EN CEGHFGYIELPVPI
Sbjct: 23 STGEEICTYSINECPVTHPSQLGNPFLGLPLEAGKCESCGASENDKCEGHFGYIELPVPI 82
Query: 181 YHPSHISELKAILSLVCFKCMRXXXXXXXXXXXXSDVSVATCSHCRDLPAISIKEVKTSD 360
YHP H++EL+ +LSL+C KC+R + + CS+CRD+PA+S+KE+KT+D
Sbjct: 83 YHPCHVTELRQLLSLICLKCLRIKKGKVKQSNGKGNAAPTLCSYCRDIPALSLKEIKTTD 142
Query: 361 GAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLEALNILKEIPEETKKRLS 537
GAI L+L P M + WNFL ++GF +G + RTLLP EALNILK++P++T+++L+
Sbjct: 143 GAIRLELRAPHNKHMTERSWNFLDKYGFHHGGCSHHRTLLPEEALNILKKVPDDTRRKLA 202
Query: 538 AKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKRVLNKIELIKRSRSGS 717
A+G+ Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++LK+VL KIE IKRSRSGS
Sbjct: 203 ARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALLKKVLQKIEQIKRSRSGS 262
Query: 718 PNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-DAGKNSSKQWLEKIRTLF 894
PNFESH+ E DLQLAI +Y+ LRGTTR P D T++F +G D+ S+KQWLEK+RTLF
Sbjct: 263 PNFESHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSADSAALSTKQWLEKMRTLF 322
Query: 895 ISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLERLQKMVDNRLCVTY 1074
ISKGSGFSSRSV+TGD Y G+ +GLPSE+AKR+TFEE+VT N+ RLQ +VD LC+TY
Sbjct: 323 ISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDININRLQDVVDKGLCLTY 382
Query: 1075 KDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKHSLQAFTVYVHDDHT 1254
+DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPSTHKHSLQAF YVHDDHT
Sbjct: 383 RDGQATYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFYAYVHDDHT 442
Query: 1255 VKINPLVCAPLGADFDGDCIHIFYPQSLAAKAEVMELFSIEQQLLSSHSGQLNFQLVSDS 1434
VKINPL+C P ADFDGDC+HI+YPQSLAAKAE +ELFS+E+QL+SSHSG++N QL +DS
Sbjct: 443 VKINPLMCGPFSADFDGDCVHIYYPQSLAAKAEALELFSVERQLISSHSGKVNLQLGNDS 502
Query: 1435 LLSLKVMTATSFLRKETAQQLCMFVSPVLPPPAVFKACNSGSLWTIYQILQCALPPSVDC 1614
L+++K M+ T+ L KE A QL MFV L PAV K S WTI QI+Q A P ++ C
Sbjct: 503 LVAMKAMSHTTMLHKELANQLAMFVPFSLLAPAVIKPVPS---WTISQIVQGAFPANLTC 559
Query: 1615 IGQSHVINQSEILKFEFNRDLLQSSLTDIITSILVAKGPRDALILFNSLQPLLMEVLSSE 1794
G +H++ S I++ + ++ +Q S D+++SIL KGP++AL N L+PLLME L +
Sbjct: 560 QGDTHLVRDSTIIRLDLGKESVQDSFPDLVSSILREKGPKEALQFLNVLEPLLMEFLLLD 619
Query: 1795 GFSISLEDFNVPNSMLHEVQDSIQEISSLLRQLRISYDELLELQVEKNLKRIKVPIVACI 1974
G SISL DFNVP ++L E Q I+ S +L Q R S + +E +VE NLK +K I +
Sbjct: 620 GLSISLRDFNVPKALLEEAQKDIRNQSLILEQSRCSTSQFVEFRVENNLKNVKQQISDSV 679
Query: 1975 LQLSALGFVIDSKSESSISKVXXXXXXXXXXXXDRGKLYSKALVDDLYSHFVSKYSIRED 2154
+ S LG +ID K E+S+SKV GKLYS+ LV+D +++FV+K+ D
Sbjct: 680 GKFSDLGLLIDPKKEASMSKVVQQVGFVGLQLYREGKLYSRRLVEDCFTNFVNKHLAIGD 739
Query: 2155 KPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKNLMAILRDVVV 2334
+ EAYGLV+SS HGL P+E +H+IS RE +IRSSRGL+EPG LFKNLMAILRDVV+
Sbjct: 740 EYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTLFKNLMAILRDVVI 799
Query: 2335 CYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAYKAVLDSSNST 2514
CYDGTVRN+CSNSIIQ +Y D+ +S SV P GEPVGVLAATAIS PAYKAVLDSS S
Sbjct: 800 CYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISNPAYKAVLDSSQSN 859
Query: 2515 NSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQNCLRSVMLKHC 2694
N+SWE MKEIL + +Y+ND+ DR+VVL+LN+C C KKFC+E AALAVQ+CL+ V L C
Sbjct: 860 NASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALAVQSCLKRVTLGDC 919
Query: 2695 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 2874
A D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +KK
Sbjct: 920 ATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKKK 979
Query: 2875 GHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTIC 3051
GHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++C
Sbjct: 980 GHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSVC 1039
Query: 3052 PILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWR 3231
+LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAWR
Sbjct: 1040 SVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAWR 1099
Query: 3232 IVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLV 3411
+DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL+
Sbjct: 1100 TAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHLI 1159
Query: 3412 LVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSV 3591
LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG V
Sbjct: 1160 LVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCV 1219
Query: 3592 VSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGS 3771
VSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1220 VSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFLD 1276
Query: 3772 DIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 3864
D++ +++ DDM LSPEP+ KPTFED
Sbjct: 1277 DVDYLVEENAADDMCLSPEPDGTLGKPTFED 1307