BLASTX nr result

ID: Ophiopogon23_contig00041238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00041238
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALG05253.2| hypothetical protein 5E7_035 [uncultured bacteriu...    59   1e-07
gb|ADI18136.1| hypothetical protein [uncultured Verrucomicrobial...    56   2e-07
gb|ADI16723.1| hypothetical protein [uncultured Verrucomicrobial...    52   2e-06
gb|KUK19636.1| hypothetical protein XD55_0291 [Thermodesulfobact...    55   3e-06
emb|SCJ66497.1| Uncharacterised protein [uncultured Ruminococcus...    55   3e-06
gb|EFD61410.1| conserved hypothetical protein [Mycobacterium tub...    52   8e-06

>gb|ALG05253.2| hypothetical protein 5E7_035 [uncultured bacterium 5E7]
          Length = 245

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 41/88 (46%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
 Frame = -1

Query: 470 LIFPHWSLVTPYTSS*RLSRELCFC*T------VAKRNLLWPINGH-----PFSRSYGAN 324
           L F HW+ V+PYTS+  L+    F          A R LL P  G      PFSRSYGA 
Sbjct: 78  LTFQHWAGVSPYTSACALAETCVFVKQSVGPVHCASRPLL-PARGSYRQEGPFSRSYGAI 136

Query: 323 VPSSLERFLSRA*VRLHSPTCVGLRYGH 240
           +PSSL   L     R   PTCVGLRYGH
Sbjct: 137 LPSSLTEVLPITLGRSPPPTCVGLRYGH 164


>gb|ADI18136.1| hypothetical protein [uncultured Verrucomicrobiales bacterium
           HF0200_39L05]
          Length = 95

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 39/78 (50%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = -1

Query: 359 NGHPFSRSYGANVPSSLERFLSRA*V-RLHSPTCV--GLRYGHLGEQPKPFLGNLSADTL 189
           +GHPFSRSYGAN+PSSLERFLSR+ V   H P  V    RYG        FLG  S    
Sbjct: 17  SGHPFSRSYGANLPSSLERFLSRSLVYSTHLPVSVYGTGRYG--------FLGTNSNGAF 68

Query: 188 WPKPKLPIQ*GSQFSRCV 135
            PKP+L        S CV
Sbjct: 69  RPKPRLTYHSVCHPSSCV 86


>gb|ADI16723.1| hypothetical protein [uncultured Verrucomicrobiales bacterium
          HF0010_05E02]
          Length = 51

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = -2

Query: 91 LCIRYALRPRVSSRLTLGGRTWPRKPWVYG 2
          +CI Y+LRP +SSRLTLGGRT+PRKP+ YG
Sbjct: 1  MCIGYSLRPHLSSRLTLGGRTFPRKPYPYG 30


>gb|KUK19636.1| hypothetical protein XD55_0291 [Thermodesulfobacterium commune]
          Length = 191

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 30/49 (61%)
 Frame = -2

Query: 148 FLVACVLALTLDGAGIFNLLCIRYALRPRVSSRLTLGGRTWPRKPWVYG 2
           F  A  L L   G GI   L I YA RP+V  RLTLGGR +PRKPW YG
Sbjct: 122 FPSASPLGLHSGGGGILTPLPIPYAFRPQVRGRLTLGGRPFPRKPWAYG 170


>emb|SCJ66497.1| Uncharacterised protein [uncultured Ruminococcus sp.]
          Length = 198

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 55/146 (37%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
 Frame = -2

Query: 421 DLAESCVFVKQSLNAIYCGP-------SMGTPFPEVTGLMCRVP*RGFSRAPECAYTHPP 263
           DLAE+CVF KQS   I CG        S G   P  + L   +P      A E + + PP
Sbjct: 62  DLAETCVFAKQSPGPILCGSFEHSLFRSYGVNLP--SSLTTLLP-----LALEFS-SCPP 113

Query: 262 VSVYGTGI*ENNQN---LFSATCPLIRFGRSLSSQFNRVVSFLVACVLALTLDGAGIFNL 92
           VSV GTGI    Q+   L  +  P   FG     Q     S      L L        N 
Sbjct: 114 VSVCGTGICFYTQSFSRLQPSVLPYSNFGPLRPGQ-PTPGSHPFEVSLCLNYRWLRNINR 172

Query: 91  LCIRYALRPRVSSRLTLGGRTWPRKP 14
           +CI YA RP +SSRLT  GRT+ +KP
Sbjct: 173 MCIGYAFRPDLSSRLTWSGRTFLQKP 198


>gb|EFD61410.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
          Length = 80

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 23/37 (62%), Positives = 25/37 (67%)
 Frame = -2

Query: 112 GAGIFNLLCIRYALRPRVSSRLTLGGRTWPRKPWVYG 2
           G G  N L I YA RPR+ SRLTLGG  WPR PW +G
Sbjct: 14  GYGNINPLSIDYACRPRLRSRLTLGGLAWPRNPWSFG 50


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