BLASTX nr result

ID: Ophiopogon23_contig00040635 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00040635
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK71961.1| uncharacterized protein A4U43_C04F14220 [Asparagu...    54   2e-06

>gb|ONK71961.1| uncharacterized protein A4U43_C04F14220 [Asparagus officinalis]
          Length = 124

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 31/65 (47%), Positives = 36/65 (55%)
 Frame = +3

Query: 3   LERFREVVLRLIMFSAISKGGXXXXXXXXXXXXXXXXXXXXXXNHRRQDPYRSEAVEECI 182
           L+R REVV RLIMF+AISKG                        +R QD YRSEAVE+CI
Sbjct: 24  LDRLREVVFRLIMFTAISKGSRSRVDTETSPVISKV--------YRHQDSYRSEAVEDCI 75

Query: 183 EFLRR 197
           EF +R
Sbjct: 76  EFFKR 80


Top