BLASTX nr result

ID: Ophiopogon23_contig00039802 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00039802
         (711 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020259789.1| putative F-box/LRR-repeat/kelch-repeat prote...    92   3e-18
ref|XP_010939043.1| PREDICTED: F-box protein At5g49610-like [Ela...    51   3e-08
ref|XP_020248352.1| putative F-box protein At5g42430 [Asparagus ...    46   6e-08
ref|XP_008778089.1| PREDICTED: F-box protein At5g49610-like, par...    46   2e-06

>ref|XP_020259789.1| putative F-box/LRR-repeat/kelch-repeat protein At1g11620 isoform X1
           [Asparagus officinalis]
          Length = 363

 Score = 92.4 bits (228), Expect = 3e-18
 Identities = 60/138 (43%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
 Frame = -1

Query: 705 VHVFSSETGKWVYVHGIRGLDQVCFPDTRITFLEGNIFMV-DARYGRIFTLNNEGRYCQQ 529
           V VFSS+TG W  V GI GL +VC  +TRI   +   F V D  YGR F L+ + + C+ 
Sbjct: 169 VDVFSSDTGSWSTVGGIAGLSEVCSANTRIACSKNESFYVLDVYYGRTFALDLKLKECRP 228

Query: 528 INCP-----KEGMYAHCFGLSRGQLHSAFMLRDKVHVWVLLNDGSTSRNRYVWKHRKSIG 364
           ++ P     K G+ A CFG  RG LH AF++RD +HV VL  D S S  RYV + RKS+G
Sbjct: 229 LHWPDGSIRKAGLCAPCFGFFRGMLHIAFVVRDAMHVCVL--DDSRS-GRYVLRFRKSMG 285

Query: 363 AIKLPHGEVVECSDVPFF 310
            I       +   D+P F
Sbjct: 286 EIMGKLSCSMVLVDIPAF 303


>ref|XP_010939043.1| PREDICTED: F-box protein At5g49610-like [Elaeis guineensis]
          Length = 371

 Score = 51.2 bits (121), Expect(2) = 3e-08
 Identities = 37/119 (31%), Positives = 58/119 (48%)
 Frame = -1

Query: 699 VFSSETGKWVYVHGIRGLDQVCFPDTRITFLEGNIFMVDARYGRIFTLNNEGRYCQQINC 520
           +FSSET +WV      G +   + + + TF  G IF       ++  ++ EG+ C++I  
Sbjct: 185 IFSSETNEWVVSEVFDGKN---YHEPQATFFHG-IFHFTNGLNQVLGVDPEGKICRRIEL 240

Query: 519 PKEGMYAHCFGLSRGQLHSAFMLRDKVHVWVLLNDGSTSRNRYVWKHRKSIGAIKLPHG 343
           P E     C GLS G LH     +D++ VW+L +    S   +V K   +I A+   HG
Sbjct: 241 P-ESDGIECLGLSGGYLHYMLQSKDEIKVWMLKD---YSHVEWVLKSCINIRAMLQNHG 295



 Score = 35.4 bits (80), Expect(2) = 3e-08
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -2

Query: 299 FHPHLDLIYIRYRDKLFSYRLPSAKXXXXXXXXXXVGRPSLFAYSPCYSE 150
           FHP +D++++R + K+FSY L S +           G P    YSP  S+
Sbjct: 316 FHPDVDVVFLRIKQKIFSYHLNSGRLEEVGDLSYIYG-PGCAVYSPRLSK 364


>ref|XP_020248352.1| putative F-box protein At5g42430 [Asparagus officinalis]
          Length = 361

 Score = 46.2 bits (108), Expect(2) = 6e-08
 Identities = 24/55 (43%), Positives = 32/55 (58%)
 Frame = -2

Query: 314 FFVEAFHPHLDLIYIRYRDKLFSYRLPSAKXXXXXXXXXXVGRPSLFAYSPCYSE 150
           F + +FH  LD+I+++ + KLFSY L SAK           G    FAYSPC+SE
Sbjct: 298 FRILSFHSDLDVIFLKLQGKLFSYHLKSAK---LEEMCSFEGNRPCFAYSPCFSE 349



 Score = 39.3 bits (90), Expect(2) = 6e-08
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
 Frame = -1

Query: 708 GVHVFSSETGKWVYVHGIRGLDQVCFPDTRITFLEGNIFMVDARYGRIFTLNNEGRYCQQ 529
           GV +FSS T +W  V     ++ + F      FL  +IF V    G  F +  +   C +
Sbjct: 163 GVEIFSSVTCQWTEVQRYYRINNISFARFGFAFL-NDIFYVLTECGLTFRMEED--CCGE 219

Query: 528 INCPKEGMY----AHCFGLSRGQLHSAFMLRDKVHVWVLLNDGSTSR-NRYVWKHRKSI 367
           +  P  G +        G S+G L+   ++  ++ VW   +     + ++YV KHR +I
Sbjct: 220 VYRPNMGSWLGRNTGFIGQSQGSLYHTMIVSGELFVWAEDSPKKYMKASKYVLKHRNNI 278


>ref|XP_008778089.1| PREDICTED: F-box protein At5g49610-like, partial [Phoenix
           dactylifera]
          Length = 385

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
 Frame = -1

Query: 699 VFSSETGKWVYVHGIRGLDQVCFPDTRITFLEGNIFMVDARYGRIFTLNNEGRYCQQINC 520
           +FS+ T +WV      G     +   + TF  G IF V     +++ ++ EG+ C +I  
Sbjct: 187 IFSTRTNQWVESEVSYGRT---YNSLQATFTNG-IFYVAYGLNQVWGIDPEGKVCHRIEL 242

Query: 519 PK-EGMYAHCFGLSRGQLHSAFMLRDKVHVWVLLNDGSTSRNRYVWKHRKSIGAIKLPHG 343
           P+ +GM   C G S G LH     + K+ VW+L +        +++KH  ++ A+   HG
Sbjct: 243 PESDGM--DCLGHSGGYLHYMLRSKGKIKVWMLKDYCHVD---WIFKHCINVRAMLQKHG 297



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -2

Query: 311 FVEAFHPHLDLIYIRYRDKLFSYRLPSAKXXXXXXXXXXVGRPSLFAYSP 162
           +V  FHP +D I++R  D +FSY L S +           G   + AYSP
Sbjct: 305 YVTEFHPDVDAIFLRIDDNIFSYHLNSGRLEEVYNLPDTSGLECV-AYSP 353


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