BLASTX nr result
ID: Ophiopogon23_contig00039731
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00039731
(401 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OAY68085.1| DNA repair protein RAD16 [Ananas comosus] 158 1e-42
ref|XP_020093230.1| DNA repair protein RAD16 isoform X2 [Ananas ... 158 3e-42
ref|XP_020093229.1| DNA repair protein RAD16 isoform X1 [Ananas ... 158 3e-42
ref|XP_008804518.1| PREDICTED: ATP-dependent helicase rhp16 [Pho... 152 2e-41
ref|XP_020256763.1| LOW QUALITY PROTEIN: DNA repair protein RAD1... 155 3e-41
ref|XP_010929627.1| PREDICTED: DNA repair protein RAD16 [Elaeis ... 151 9e-40
gb|ONK74947.1| uncharacterized protein A4U43_C03F11740 [Asparagu... 140 8e-39
ref|XP_008342018.1| PREDICTED: DNA repair protein RAD16 [Malus d... 142 2e-36
ref|XP_002460761.1| DNA repair protein RAD16 [Sorghum bicolor] >... 141 3e-36
gb|PNY00593.1| ATP-dependent helicase rhp16-like protein, partia... 138 4e-36
gb|ONM57632.1| Helicase protein with RING/U-box domain [Zea mays] 140 4e-36
ref|XP_008653136.1| DNA repair protein RAD16 isoform X2 [Zea may... 140 4e-36
ref|XP_008653135.1| DNA repair protein RAD16 isoform X1 [Zea mays] 140 4e-36
gb|KDO54693.1| hypothetical protein CISIN_1g0027442mg, partial [... 134 6e-36
gb|PON68694.1| TNF receptor-associated factor [Parasponia anders... 139 1e-35
gb|PON62219.1| TNF receptor-associated factor [Trema orientalis] 139 1e-35
gb|KDO54692.1| hypothetical protein CISIN_1g0027442mg, partial [... 134 4e-35
gb|EXB37878.1| ATP-dependent helicase rhp16 [Morus notabilis] 138 4e-35
ref|XP_024033055.1| DNA repair protein RAD16 isoform X2 [Morus n... 138 4e-35
ref|XP_024033054.1| DNA repair protein RAD16 isoform X1 [Morus n... 138 4e-35
>gb|OAY68085.1| DNA repair protein RAD16 [Ananas comosus]
Length = 660
Score = 158 bits (399), Expect = 1e-42
Identities = 73/103 (70%), Positives = 85/103 (82%)
Frame = -2
Query: 355 SSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFVI 176
SSSSL RT TLV+CPVVAVIQWVGEIERYTEKGSA+VLVYHG KR+ DF+ YDFV+
Sbjct: 128 SSSSLPRTKCTLVICPVVAVIQWVGEIERYTEKGSARVLVYHGAKRSHTYGDFSDYDFVL 187
Query: 175 TTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGP 47
TTY TIE DYR+ VMP ++C YCGKK+ + M+IHLKY+CGP
Sbjct: 188 TTYSTIESDYRKYVMPPKEKCEYCGKKFNSNKMRIHLKYYCGP 230
>ref|XP_020093230.1| DNA repair protein RAD16 isoform X2 [Ananas comosus]
Length = 819
Score = 158 bits (399), Expect = 3e-42
Identities = 73/103 (70%), Positives = 85/103 (82%)
Frame = -2
Query: 355 SSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFVI 176
SSSSL RT TLV+CPVVAVIQWVGEIERYTEKGSA+VLVYHG KR+ DF+ YDFV+
Sbjct: 194 SSSSLPRTKCTLVICPVVAVIQWVGEIERYTEKGSARVLVYHGAKRSHTYGDFSDYDFVL 253
Query: 175 TTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGP 47
TTY TIE DYR+ VMP ++C YCGKK+ + M+IHLKY+CGP
Sbjct: 254 TTYSTIESDYRKYVMPPKEKCEYCGKKFNSNKMRIHLKYYCGP 296
>ref|XP_020093229.1| DNA repair protein RAD16 isoform X1 [Ananas comosus]
Length = 860
Score = 158 bits (399), Expect = 3e-42
Identities = 73/103 (70%), Positives = 85/103 (82%)
Frame = -2
Query: 355 SSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFVI 176
SSSSL RT TLV+CPVVAVIQWVGEIERYTEKGSA+VLVYHG KR+ DF+ YDFV+
Sbjct: 194 SSSSLPRTKCTLVICPVVAVIQWVGEIERYTEKGSARVLVYHGAKRSHTYGDFSDYDFVL 253
Query: 175 TTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGP 47
TTY TIE DYR+ VMP ++C YCGKK+ + M+IHLKY+CGP
Sbjct: 254 TTYSTIESDYRKYVMPPKEKCEYCGKKFNSNKMRIHLKYYCGP 296
>ref|XP_008804518.1| PREDICTED: ATP-dependent helicase rhp16 [Phoenix dactylifera]
Length = 447
Score = 152 bits (383), Expect = 2e-41
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = -2
Query: 379 SNLGNLEASSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYD 200
S++G+ S S L RT TLV+CPVVAVIQWVGEIERYT+KG+A+VLVYHG KR+ DYD
Sbjct: 193 SDMGS--CSISPLPRTKCTLVICPVVAVIQWVGEIERYTKKGTARVLVYHGAKRSNTDYD 250
Query: 199 FTKYDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGP 47
F YDFV+TTY TIE DYR+++MP +C YC K + MK+HLKY+CGP
Sbjct: 251 FNNYDFVLTTYSTIESDYRKHMMPPKLKCQYCDKSFYPHKMKVHLKYYCGP 301
>ref|XP_020256763.1| LOW QUALITY PROTEIN: DNA repair protein RAD16-like [Asparagus
officinalis]
Length = 720
Score = 155 bits (391), Expect = 3e-41
Identities = 82/119 (68%), Positives = 89/119 (74%)
Frame = -2
Query: 400 LTSRDQKSNLGNLEASSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPK 221
LT RDQKSN+G+LEASSSS R GATLV+CPVVAVIQWVGEIERYTEKGS +VLVYHGP
Sbjct: 80 LTLRDQKSNVGDLEASSSS--RNGATLVICPVVAVIQWVGEIERYTEKGSVRVLVYHGPN 137
Query: 220 RAKLDYDFTKYDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
RAK DYDF+KYDFVITTYQTIE C KSM++HL YHCGPN
Sbjct: 138 RAKGDYDFSKYDFVITTYQTIEXXXXE---------VXC-----XKSMRVHLLYHCGPN 182
>ref|XP_010929627.1| PREDICTED: DNA repair protein RAD16 [Elaeis guineensis]
Length = 881
Score = 151 bits (381), Expect = 9e-40
Identities = 69/111 (62%), Positives = 86/111 (77%)
Frame = -2
Query: 379 SNLGNLEASSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYD 200
S++G+ +S SSL RT TLV+CPVVAVIQWVGEIERYT+ GS +VLVYHG KR+ DYD
Sbjct: 210 SDMGS--SSMSSLPRTKCTLVICPVVAVIQWVGEIERYTKNGSTRVLVYHGAKRSNTDYD 267
Query: 199 FTKYDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGP 47
F +DFV+TTY TIE DYR+++MP +C YC K + MK+HLKY+CGP
Sbjct: 268 FNNFDFVLTTYSTIESDYRKHMMPPKLKCEYCDKSFYPNKMKVHLKYYCGP 318
>gb|ONK74947.1| uncharacterized protein A4U43_C03F11740 [Asparagus officinalis]
Length = 240
Score = 140 bits (352), Expect = 8e-39
Identities = 70/82 (85%), Positives = 75/82 (91%)
Frame = -2
Query: 400 LTSRDQKSNLGNLEASSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPK 221
LT RDQKSN+G+LEASSSS R GATLV+CPVVAVIQWVGEIERYTEKGS +VLVYHGP
Sbjct: 155 LTLRDQKSNVGDLEASSSS--RNGATLVICPVVAVIQWVGEIERYTEKGSVRVLVYHGPN 212
Query: 220 RAKLDYDFTKYDFVITTYQTIE 155
RAK DYDF+KYDFVITTYQTIE
Sbjct: 213 RAKGDYDFSKYDFVITTYQTIE 234
>ref|XP_008342018.1| PREDICTED: DNA repair protein RAD16 [Malus domestica]
Length = 875
Score = 142 bits (357), Expect = 2e-36
Identities = 67/104 (64%), Positives = 75/104 (72%)
Frame = -2
Query: 355 SSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFVI 176
SS+S R TLVVCPVVAV QWV EIER+T KGS KVLVYHG R K F++YDFVI
Sbjct: 229 SSTSFPRIKTTLVVCPVVAVSQWVSEIERFTSKGSTKVLVYHGANREKSSQIFSEYDFVI 288
Query: 175 TTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
TTY +E DYR+NVMP ++C YCGK Y K M HLKY CGPN
Sbjct: 289 TTYSIVEADYRKNVMPPKQKCQYCGKLYYEKKMSTHLKYFCGPN 332
>ref|XP_002460761.1| DNA repair protein RAD16 [Sorghum bicolor]
gb|EER97282.1| hypothetical protein SORBI_3002G315100 [Sorghum bicolor]
Length = 857
Score = 141 bits (355), Expect = 3e-36
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 4/112 (3%)
Frame = -2
Query: 367 NLEASSSSLS----RTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYD 200
N ASSS+ S + G TLVVCPVVAVIQW EIER+TE GS +VL+YHG KR D
Sbjct: 206 NHAASSSTSSVGRPKVGCTLVVCPVVAVIQWTEEIERHTESGSVRVLIYHGAKRGAQKLD 265
Query: 199 FTKYDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
F YDFVITTY TIE DYR+++MP C YC + + MK+HLKYHCGPN
Sbjct: 266 FNSYDFVITTYSTIEVDYRKHIMPPKIRCQYCSRLFYPNKMKVHLKYHCGPN 317
>gb|PNY00593.1| ATP-dependent helicase rhp16-like protein, partial [Trifolium
pratense]
Length = 454
Score = 138 bits (347), Expect = 4e-36
Identities = 63/104 (60%), Positives = 77/104 (74%)
Frame = -2
Query: 355 SSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFVI 176
SS L TLV+CPVVAV QWV EI+R+T KGS KVLVYHGPKR K+ F++YDFVI
Sbjct: 265 SSKVLPVIKGTLVICPVVAVNQWVTEIDRFTLKGSTKVLVYHGPKREKIAEQFSEYDFVI 324
Query: 175 TTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
+TY +E +YR++VMP ++C YCGK Y + IHLKYHCGPN
Sbjct: 325 STYALVESEYRKHVMPPKEKCPYCGKLYNPSKLTIHLKYHCGPN 368
>gb|ONM57632.1| Helicase protein with RING/U-box domain [Zea mays]
Length = 802
Score = 140 bits (354), Expect = 4e-36
Identities = 65/109 (59%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Frame = -2
Query: 358 ASSSSLSRT----GATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTK 191
+S+SS+ RT G TLVVCPVVAVIQW EIER+T GS +VL+YHG KR +DF
Sbjct: 201 SSNSSVGRTKPQVGCTLVVCPVVAVIQWTEEIERHTASGSVRVLIYHGAKRVTQSFDFNS 260
Query: 190 YDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
YDFVITTY TIE DYR+++MP C YC K + MK+HL YHCGPN
Sbjct: 261 YDFVITTYSTIEADYRKHIMPPKTRCQYCNKLFYPNKMKVHLMYHCGPN 309
>ref|XP_008653136.1| DNA repair protein RAD16 isoform X2 [Zea mays]
gb|ONM57633.1| Helicase protein with RING/U-box domain [Zea mays]
Length = 850
Score = 140 bits (354), Expect = 4e-36
Identities = 65/109 (59%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Frame = -2
Query: 358 ASSSSLSRT----GATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTK 191
+S+SS+ RT G TLVVCPVVAVIQW EIER+T GS +VL+YHG KR +DF
Sbjct: 201 SSNSSVGRTKPQVGCTLVVCPVVAVIQWTEEIERHTASGSVRVLIYHGAKRVTQSFDFNS 260
Query: 190 YDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
YDFVITTY TIE DYR+++MP C YC K + MK+HL YHCGPN
Sbjct: 261 YDFVITTYSTIEADYRKHIMPPKTRCQYCNKLFYPNKMKVHLMYHCGPN 309
>ref|XP_008653135.1| DNA repair protein RAD16 isoform X1 [Zea mays]
Length = 856
Score = 140 bits (354), Expect = 4e-36
Identities = 65/109 (59%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Frame = -2
Query: 358 ASSSSLSRT----GATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTK 191
+S+SS+ RT G TLVVCPVVAVIQW EIER+T GS +VL+YHG KR +DF
Sbjct: 207 SSNSSVGRTKPQVGCTLVVCPVVAVIQWTEEIERHTASGSVRVLIYHGAKRVTQSFDFNS 266
Query: 190 YDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
YDFVITTY TIE DYR+++MP C YC K + MK+HL YHCGPN
Sbjct: 267 YDFVITTYSTIEADYRKHIMPPKTRCQYCNKLFYPNKMKVHLMYHCGPN 315
>gb|KDO54693.1| hypothetical protein CISIN_1g0027442mg, partial [Citrus sinensis]
Length = 316
Score = 134 bits (338), Expect = 6e-36
Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 3/122 (2%)
Frame = -2
Query: 400 LTSRDQKSNLGNLEASSSS---LSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYH 230
L R+ + +G L+ASSSS L ATLV+CPV AV QWV EI R+T GS KVL+YH
Sbjct: 71 LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYH 130
Query: 229 GPKRAKLDYDFTKYDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCG 50
G R + F+++DFVITTY IE DYR++VMP ++C YCGK + K + +HLKY CG
Sbjct: 131 GSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCG 190
Query: 49 PN 44
P+
Sbjct: 191 PS 192
>gb|PON68694.1| TNF receptor-associated factor [Parasponia andersonii]
Length = 832
Score = 139 bits (351), Expect = 1e-35
Identities = 65/104 (62%), Positives = 78/104 (75%)
Frame = -2
Query: 355 SSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFVI 176
SS+ L R ATLV+CPVVAV QWV EI+R+T KGS KVLVYHG R K F++YDFVI
Sbjct: 217 SSTGLPRIKATLVICPVVAVSQWVREIDRFTSKGSTKVLVYHGANREKNFKHFSEYDFVI 276
Query: 175 TTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
TTY +E +YR+NVMP ++CTYCGK + K M IHLKY CGP+
Sbjct: 277 TTYSIVEAEYRKNVMPPKEKCTYCGKMFHGKRMPIHLKYFCGPD 320
>gb|PON62219.1| TNF receptor-associated factor [Trema orientalis]
Length = 878
Score = 139 bits (351), Expect = 1e-35
Identities = 64/104 (61%), Positives = 78/104 (75%)
Frame = -2
Query: 355 SSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFVI 176
SS+ L R ATLV+CPVVAV QWV EI+R+T KGS KVLVYHG R K F++YDFVI
Sbjct: 228 SSTGLPRIKATLVICPVVAVSQWVSEIDRFTSKGSTKVLVYHGANREKNFKHFSEYDFVI 287
Query: 175 TTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
TTY +E +YR+NVMP ++C+YCGK + K M IHLKY CGP+
Sbjct: 288 TTYSIVEAEYRKNVMPPKEKCSYCGKMFHGKKMSIHLKYFCGPD 331
>gb|KDO54692.1| hypothetical protein CISIN_1g0027442mg, partial [Citrus sinensis]
Length = 408
Score = 134 bits (338), Expect = 4e-35
Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 3/122 (2%)
Frame = -2
Query: 400 LTSRDQKSNLGNLEASSSS---LSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYH 230
L R+ + +G L+ASSSS L ATLV+CPV AV QWV EI R+T GS KVL+YH
Sbjct: 163 LAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYH 222
Query: 229 GPKRAKLDYDFTKYDFVITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCG 50
G R + F+++DFVITTY IE DYR++VMP ++C YCGK + K + +HLKY CG
Sbjct: 223 GSNRERSAKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCG 282
Query: 49 PN 44
P+
Sbjct: 283 PS 284
>gb|EXB37878.1| ATP-dependent helicase rhp16 [Morus notabilis]
Length = 837
Score = 138 bits (347), Expect = 4e-35
Identities = 63/105 (60%), Positives = 79/105 (75%)
Frame = -2
Query: 358 ASSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFV 179
+SS+SLS ATLV+CPVVAV QWVGEIER+T KGS KVLVYHG R K F++YDFV
Sbjct: 236 SSSTSLSGIKATLVICPVVAVSQWVGEIERFTSKGSTKVLVYHGTNREKNFQHFSEYDFV 295
Query: 178 ITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
ITTY +E +YR+ +MP + C+YCGK + + M +HL Y+CGPN
Sbjct: 296 ITTYSIVEGEYRKCIMPPKERCSYCGKMFAKRRMWVHLTYYCGPN 340
>ref|XP_024033055.1| DNA repair protein RAD16 isoform X2 [Morus notabilis]
Length = 865
Score = 138 bits (347), Expect = 4e-35
Identities = 63/105 (60%), Positives = 79/105 (75%)
Frame = -2
Query: 358 ASSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFV 179
+SS+SLS ATLV+CPVVAV QWVGEIER+T KGS KVLVYHG R K F++YDFV
Sbjct: 218 SSSTSLSGIKATLVICPVVAVSQWVGEIERFTSKGSTKVLVYHGTNREKNFQHFSEYDFV 277
Query: 178 ITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
ITTY +E +YR+ +MP + C+YCGK + + M +HL Y+CGPN
Sbjct: 278 ITTYSIVEGEYRKCIMPPKERCSYCGKMFAKRRMWVHLTYYCGPN 322
>ref|XP_024033054.1| DNA repair protein RAD16 isoform X1 [Morus notabilis]
Length = 866
Score = 138 bits (347), Expect = 4e-35
Identities = 63/105 (60%), Positives = 79/105 (75%)
Frame = -2
Query: 358 ASSSSLSRTGATLVVCPVVAVIQWVGEIERYTEKGSAKVLVYHGPKRAKLDYDFTKYDFV 179
+SS+SLS ATLV+CPVVAV QWVGEIER+T KGS KVLVYHG R K F++YDFV
Sbjct: 219 SSSTSLSGIKATLVICPVVAVSQWVGEIERFTSKGSTKVLVYHGTNREKNFQHFSEYDFV 278
Query: 178 ITTYQTIEYDYRRNVMPEGKECTYCGKKYGAKSMKIHLKYHCGPN 44
ITTY +E +YR+ +MP + C+YCGK + + M +HL Y+CGPN
Sbjct: 279 ITTYSIVEGEYRKCIMPPKERCSYCGKMFAKRRMWVHLTYYCGPN 323