BLASTX nr result

ID: Ophiopogon23_contig00039537 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00039537
         (372 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254595.1| E3 ubiquitin-protein ligase SDIR1-like [Aspa...    57   5e-07
gb|ONK78450.1| uncharacterized protein A4U43_C02F18910 [Asparagu...    57   5e-07
gb|OVA17824.1| zinc finger protein [Macleaya cordata]                  54   6e-06
ref|XP_010256868.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1...    54   9e-06
ref|XP_010256867.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1...    54   1e-05

>ref|XP_020254595.1| E3 ubiquitin-protein ligase SDIR1-like [Asparagus officinalis]
          Length = 270

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
 Frame = -3

Query: 295 SILGFITRIIF-----MNSHFFLP-DFLGWLFLVVLLTAAVMIRYASFQQQSHRPQP--- 143
           +++G++  ++F     M+S    P + L WL L V L AA +  +     Q   P     
Sbjct: 46  AVIGYLCFMVFFLVMVMSSDQLSPYNILLWLGLSVCLLAAFLKVFYCKHHQDEIPMSTNN 105

Query: 142 -QAPHDELSGQQVDVPTFVTIEQLPDIRIQLAHLNREFDD 26
            +  H+E   QQ+DVP F T +QLPDIRIQLA L+REFD+
Sbjct: 106 EEMEHEE---QQIDVPPFATRQQLPDIRIQLASLDREFDE 142


>gb|ONK78450.1| uncharacterized protein A4U43_C02F18910 [Asparagus officinalis]
          Length = 278

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
 Frame = -3

Query: 295 SILGFITRIIF-----MNSHFFLP-DFLGWLFLVVLLTAAVMIRYASFQQQSHRPQP--- 143
           +++G++  ++F     M+S    P + L WL L V L AA +  +     Q   P     
Sbjct: 54  AVIGYLCFMVFFLVMVMSSDQLSPYNILLWLGLSVCLLAAFLKVFYCKHHQDEIPMSTNN 113

Query: 142 -QAPHDELSGQQVDVPTFVTIEQLPDIRIQLAHLNREFDD 26
            +  H+E   QQ+DVP F T +QLPDIRIQLA L+REFD+
Sbjct: 114 EEMEHEE---QQIDVPPFATRQQLPDIRIQLASLDREFDE 150


>gb|OVA17824.1| zinc finger protein [Macleaya cordata]
          Length = 271

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
 Frame = -3

Query: 307 SWVFSILGFITRIIFMNSHFFLPDFLGWLFLVVLLTAAVMIRYASFQQQSHRPQPQAP-- 134
           S  F +   +   + +NSH   P+FL WL L V L A  +  YA+ QQ   + Q  A   
Sbjct: 38  SMAFLVTAVLLLFMILNSHQMSPNFLLWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAA 97

Query: 133 -----HDELSGQQVDVPTFVTIEQLPDIRIQLAHLNREFDD 26
                H EL         F T  +L  +R+QLA L+REFDD
Sbjct: 98  SGLLGHTELRLHMPPSIAFATRGRLQGLRLQLALLDREFDD 138


>ref|XP_010256868.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Nelumbo
           nucifera]
 ref|XP_010256869.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Nelumbo
           nucifera]
 ref|XP_010256870.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Nelumbo
           nucifera]
 ref|XP_010256871.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Nelumbo
           nucifera]
 ref|XP_010256872.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Nelumbo
           nucifera]
          Length = 276

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = -3

Query: 268 IFMNSHFFLPDFLGWLFLVVLLTAAVMIRYASFQQQSHRPQPQAP-------HDELSGQQ 110
           + +NSH   P+FL WLFL V L A  +  YA+ QQ   + Q  A        H EL    
Sbjct: 50  MILNSHQMSPNFLLWLFLGVFLMATSLRMYATCQQFQAQAQAHAAVASGLLGHTELRLHM 109

Query: 109 VDVPTFVTIEQLPDIRIQLAHLNREFDD 26
                F T  +L  +R+QLA L+REFDD
Sbjct: 110 PPSIAFATRGRLQGLRLQLALLDREFDD 137


>ref|XP_010256867.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X1 [Nelumbo
           nucifera]
          Length = 317

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = -3

Query: 268 IFMNSHFFLPDFLGWLFLVVLLTAAVMIRYASFQQQSHRPQPQAP-------HDELSGQQ 110
           + +NSH   P+FL WLFL V L A  +  YA+ QQ   + Q  A        H EL    
Sbjct: 91  MILNSHQMSPNFLLWLFLGVFLMATSLRMYATCQQFQAQAQAHAAVASGLLGHTELRLHM 150

Query: 109 VDVPTFVTIEQLPDIRIQLAHLNREFDD 26
                F T  +L  +R+QLA L+REFDD
Sbjct: 151 PPSIAFATRGRLQGLRLQLALLDREFDD 178


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