BLASTX nr result

ID: Ophiopogon23_contig00039362 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00039362
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274237.1| F-box/FBD/LRR-repeat protein At1g13570-like ...   120   2e-29
ref|XP_020274229.1| uncharacterized protein LOC109848915 [Aspara...    54   1e-06

>ref|XP_020274237.1| F-box/FBD/LRR-repeat protein At1g13570-like [Asparagus officinalis]
 gb|ONK79327.1| uncharacterized protein A4U43_C01F5240 [Asparagus officinalis]
          Length = 415

 Score =  120 bits (300), Expect = 2e-29
 Identities = 75/143 (52%), Positives = 91/143 (63%), Gaps = 4/143 (2%)
 Frame = -1

Query: 420 LTAMDLRRVPFTDNGXXXXXXXXXXXXXXXXXXXTGCTHLKISAQELVKLTIFEGKFVDV 241
           LT M L RV FTDNG                   TGCTHL ISAQ++VK+ I +G F D+
Sbjct: 160 LTVMTLDRVSFTDNGLATLMSLCPLLKELVLRQVTGCTHLNISAQKIVKVVI-QGSFHDI 218

Query: 240 HFESTPLLATLSIKLLAVADNSV----SARIVKVLGHLPSIHHLELLDHTTLQNLAGGVN 73
            FESTPLLAT SIK+L VA +S+      RIV+VLG  PSI+ LELL   TL+NLA    
Sbjct: 219 RFESTPLLATASIKMLEVAGDSLVSKEDCRIVRVLGDTPSIYQLELLG-PTLKNLA---V 274

Query: 72  GDVPIYLPSTCPLKDLVIHINFE 4
           GDVP++L + CP+K L+I INFE
Sbjct: 275 GDVPVHLAAICPVKYLIIDINFE 297


>ref|XP_020274229.1| uncharacterized protein LOC109848915 [Asparagus officinalis]
          Length = 130

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = -1

Query: 165 RIVKVLGHLPSIHHLELLDHTTLQNLAGGVNGDVPIYLPSTCPLKDLVIHINFED 1
           +IVK LG +PSI+ LEL+ HT+ +NLA G +   P++ P+ C +K L+I+INFED
Sbjct: 17  KIVKFLGEIPSIYQLELIGHTS-RNLAVGED---PVHFPAICSVKYLLININFED 67


Top