BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00039222
         (633 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011027642.1| PREDICTED: transposon Ty3-G Gag-Pol polyprot...    57   1e-05

>ref|XP_011027642.1| PREDICTED: transposon Ty3-G Gag-Pol polyprotein [Populus
           euphratica]
          Length = 1364

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 30/67 (44%), Positives = 38/67 (56%)
 Frame = +1

Query: 424 RFRPDFPSCSGNNLHGLIYKINQLLDFYGIADDQRVNCASLYLEEEGL*WFQRFRKAKGG 603
           +F+  FP  SGN+  G +YK  Q  +F  IA+DQRV  AS +LE   L W +   K K G
Sbjct: 111 QFKLSFPKFSGNDPTGWVYKAEQFFEFQNIANDQRVQLASFHLEGLALQWHRWLTKYK-G 169

Query: 604 NLQWFEF 624
            L W EF
Sbjct: 170 TLTWLEF 176