BLASTX nr result

ID: Ophiopogon23_contig00035974 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00035974
         (1778 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO79399.1| Zinc finger, CCHC-type [Corchorus capsularis]           68   1e-08
ref|XP_010693123.1| PREDICTED: uncharacterized protein LOC104906...    67   2e-08
gb|PON43060.1| Zinc finger, CCHC-type, partial [Parasponia ander...    59   7e-07
gb|PON31258.1| Zinc finger, CCHC-type, partial [Trema orientalis]      58   2e-06
ref|XP_021821940.1| uncharacterized protein LOC110763459 [Prunus...    61   2e-06
ref|XP_006480300.1| PREDICTED: uncharacterized protein LOC102609...    57   5e-06
gb|OMP03432.1| Integrase, catalytic core [Corchorus capsularis]        61   6e-06
ref|XP_017181790.1| PREDICTED: uncharacterized protein LOC108170...    59   6e-06

>gb|OMO79399.1| Zinc finger, CCHC-type [Corchorus capsularis]
          Length = 306

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = -3

Query: 1290 GGGPSRRNDDQEQRNSRR-NVECFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSEDE 1114
            G  P R  DD E++  RR N +C+NCGK GHFARD W K+  A+GN+A+ S    DSE++
Sbjct: 90   GAQPVRDKDDNEEKRHRRLNDKCYNCGKVGHFARDYWFKQ--AQGNAATTSRGGNDSEED 147

Query: 1113 WERQM 1099
            W+ Q+
Sbjct: 148  WDFQV 152


>ref|XP_010693123.1| PREDICTED: uncharacterized protein LOC104906105 [Beta vulgaris subsp.
            vulgaris]
          Length = 280

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = -3

Query: 1290 GGGPSRRNDDQEQRN-SRRNVECFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSEDE 1114
            G G  R+ D++E +N +RR+V C+NC K+GH+ARD WS  K AEGN+A++      SE E
Sbjct: 112  GAGQDRQQDEKEGKNQTRRDVVCYNCKKKGHYARDCWS--KPAEGNAATSMEHENRSEVE 169

Query: 1113 WERQ 1102
            W+ Q
Sbjct: 170  WDAQ 173


>gb|PON43060.1| Zinc finger, CCHC-type, partial [Parasponia andersonii]
          Length = 135

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -3

Query: 1254 QRNSRRNVECFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSEDEWE 1108
            ++N R   +C+NCGK+GH A++ WSKKK AE N+A++  + K S+DEW+
Sbjct: 12   KQNRRFEWKCYNCGKKGHIAKNCWSKKKTAESNAATSRDERK-SDDEWD 59


>gb|PON31258.1| Zinc finger, CCHC-type, partial [Trema orientalis]
          Length = 137

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
 Frame = -3

Query: 1278 SRRNDDQEQR---NSRRNVECFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSEDEWE 1108
            +++ND +  R   N R   +C+NCGK+GH A++ WSKKKA E N A+ S   + S DEW+
Sbjct: 1    AQKNDSRGGRPKQNRRFEWKCYNCGKKGHIAKNCWSKKKAEESN-ATTSRDERKSNDEWD 59


>ref|XP_021821940.1| uncharacterized protein LOC110763459 [Prunus avium]
          Length = 345

 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -3

Query: 1287 GGPSRRNDDQEQRNSRRNVE--CFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSEDE 1114
            GG SR + ++ Q  + +  E  C+NCGK+GH A+D WS K+ AE N+A+++ + K SED+
Sbjct: 243  GGASRFHGNRGQSKNTKRFEGKCYNCGKKGHMAKDCWSNKRPAESNTATSNSKEK-SEDD 301

Query: 1113 WERQ 1102
            W+ +
Sbjct: 302  WDAE 305


>ref|XP_006480300.1| PREDICTED: uncharacterized protein LOC102609402 [Citrus sinensis]
          Length = 155

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -3

Query: 1290 GGGPSRRNDDQEQRNSRRNVE--CFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSED 1117
            G G SR     +   + RN +  C+NCGK GH  ++ WSKKK AE N+A++S   ++SED
Sbjct: 75   GKGGSRPRGASKNHGNTRNFDGKCYNCGKMGHMTKECWSKKKPAESNAATSS-PKENSED 133

Query: 1116 EWERQ 1102
             W+ +
Sbjct: 134  GWDAE 138


>gb|OMP03432.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1347

 Score = 61.2 bits (147), Expect = 6e-06
 Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = -3

Query: 1290 GGGPSRRNDD-QEQRNSRRNVECFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSEDE 1114
            G  P R  DD +E+R+ R+N +C++CGK GHFARD   + K A+GN+A+ S    DSE++
Sbjct: 241  GAQPVRDKDDNEEKRHRRQNDKCYSCGKVGHFARD--CRFKQAQGNAATTSRGGIDSEED 298

Query: 1113 WERQM 1099
            W+ Q+
Sbjct: 299  WDFQV 303


>ref|XP_017181790.1| PREDICTED: uncharacterized protein LOC108170853 [Malus domestica]
          Length = 248

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -3

Query: 1287 GGPSRRNDDQEQRNSRR-NVECFNCGKRGHFARDSWSKKKAAEGNSASASHQNKDSEDEW 1111
            GG       +   NSR+ + EC+NCGK+GH A+D W+KK+  E N+A++S   K+SED W
Sbjct: 124  GGSRPGRASKNHGNSRKFDGECYNCGKKGHMAKDCWTKKEPVESNTATSS-SKKNSEDGW 182

Query: 1110 ERQ 1102
            + +
Sbjct: 183  DAE 185


Top