BLASTX nr result
ID: Ophiopogon23_contig00035887
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00035887
(547 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia a... 330 e-107
ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiell... 330 e-107
ref|YP_009092058.1| RNA polymerase beta (chloroplast) [Spirodela... 329 e-106
ref|YP_001595499.1| RNA polymerase beta' subunit-1 [Lemna minor]... 328 e-106
ref|YP_009308290.1| RNA polymerase beta' subunit (chloroplast) [... 327 e-106
ref|YP_009245497.1| RNA polymerase beta' subunit (chloroplast) [... 327 e-106
ref|YP_004769621.1| RNA polymerase beta (chloroplast) [Spirodela... 327 e-105
gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chl... 308 e-105
gb|ANQ46316.1| rpoC1 (chloroplast) [Pogostemon cablin] 308 e-105
ref|YP_009255597.1| RNA polymerase beta' subunit (chloroplast) [... 326 e-105
gb|AON75821.1| RNA polymerase beta' subunit (chloroplast) [Popul... 307 e-105
ref|YP_009434494.1| RNA polymerase beta (chloroplast) [Bergenia ... 325 e-105
ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana su... 325 e-105
gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburn... 307 e-105
gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast... 325 e-105
gb|ATG83074.1| RNA polymerase beta' subunit (chloroplast) [Coloc... 325 e-105
ref|YP_009239190.1| RNA polymerase beta' subunit (chloroplast) [... 325 e-105
ref|YP_009241578.1| RNA polymerase beta' subunit (chloroplast) [... 325 e-105
gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburn... 306 e-105
gb|ALB78339.1| RNA polymerase beta (chloroplast) [Heuchera parvi... 325 e-105
>ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
gb|AEK94499.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
Length = 690
Score = 330 bits (845), Expect = e-107
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIGLVSP+QI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGLVSPEQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
gb|AEK94416.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
Length = 690
Score = 330 bits (845), Expect = e-107
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIGLVSP+QI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGLVSPEQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_009092058.1| RNA polymerase beta (chloroplast) [Spirodela polyrhiza]
gb|AEK94333.2| RNA polymerase beta (chloroplast) [Spirodela polyrhiza]
Length = 693
Score = 329 bits (844), Expect = e-106
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIGLVSPQQI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIGAEKE+PKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEEPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_001595499.1| RNA polymerase beta' subunit-1 [Lemna minor]
sp|A9L987.1|RPOC1_LEMMI RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gb|ABD48486.1| RNA polymerase beta' subunit-1 (chloroplast) [Lemna minor]
Length = 690
Score = 328 bits (841), Expect = e-106
Identities = 152/158 (96%), Positives = 155/158 (98%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIG VSPQQI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGPVSPQQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_009308290.1| RNA polymerase beta' subunit (chloroplast) [Lagerstroemia speciosa]
gb|AOS53239.1| RNA polymerase beta' subunit (chloroplast) [Lagerstroemia speciosa]
Length = 686
Score = 327 bits (838), Expect = e-106
Identities = 153/158 (96%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIG VSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGSVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_009245497.1| RNA polymerase beta' subunit (chloroplast) [Lagerstroemia
guilinensis]
ref|YP_009259878.1| RNA polymerase beta (chloroplast) [Lagerstroemia indica]
gb|AMR98369.1| RNA polymerase beta' subunit (chloroplast) [Lagerstroemia
guilinensis]
gb|ANN13669.1| RNA polymerase beta (chloroplast) [Lagerstroemia indica]
Length = 686
Score = 327 bits (838), Expect = e-106
Identities = 153/158 (96%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIG VSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGSVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_004769621.1| RNA polymerase beta (chloroplast) [Spirodela polyrhiza]
Length = 690
Score = 327 bits (837), Expect = e-105
Identities = 151/158 (95%), Positives = 155/158 (98%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIG VSPQQI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGPVSPQQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIGAEKE+PKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEEPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chloroplast) [Panax
ginseng]
gb|AMO44333.1| RNA polymerase beta largest subunit, partial (chloroplast) [Panax
ginseng]
Length = 151
Score = 308 bits (789), Expect = e-105
Identities = 144/151 (95%), Positives = 145/151 (96%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIG VSPQQI WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 526
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|ANQ46316.1| rpoC1 (chloroplast) [Pogostemon cablin]
Length = 152
Score = 308 bits (788), Expect = e-105
Identities = 144/151 (95%), Positives = 145/151 (96%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MN NFYSMID YKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNPNFYSMIDWYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 526
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>ref|YP_009255597.1| RNA polymerase beta' subunit (chloroplast) [Cornus controversa]
gb|AND96887.1| RNA polymerase beta' subunit (chloroplast) [Cornus controversa]
Length = 689
Score = 326 bits (835), Expect = e-105
Identities = 153/158 (96%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIGLVSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>gb|AON75821.1| RNA polymerase beta' subunit (chloroplast) [Populus adenopoda]
gb|AQM54413.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
tomentosa]
Length = 152
Score = 307 bits (787), Expect = e-105
Identities = 142/151 (94%), Positives = 146/151 (96%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF+SMIDRYKHQQLRIG VSPQQI AW NKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFFSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKE+PKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 526
THVWYLKRLPSYIANLLDKPLK+LEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKQLEGLVYCD 151
>ref|YP_009434494.1| RNA polymerase beta (chloroplast) [Bergenia scopulosa]
gb|ATE89470.1| RNA polymerase beta (chloroplast) [Bergenia scopulosa]
Length = 689
Score = 325 bits (834), Expect = e-105
Identities = 152/158 (96%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIGLVSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana subsp. woodiana]
ref|YP_009462245.1| RNA polymerase beta' chain (chloroplast) [Olea exasperata]
emb|CBS29341.1| RNA polymerase beta' chain (chloroplast) [Olea woodiana subsp.
woodiana]
gb|AUT85095.1| RNA polymerase beta' chain (chloroplast) [Olea exasperata]
Length = 690
Score = 325 bits (834), Expect = e-105
Identities = 153/158 (96%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGVAFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVAFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburnum amplificatum]
Length = 152
Score = 307 bits (786), Expect = e-105
Identities = 143/151 (94%), Positives = 144/151 (95%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIG VSPQQI WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGIC CGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICTCGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 526
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast) [Heuchera
sanguinea]
Length = 689
Score = 325 bits (833), Expect = e-105
Identities = 151/158 (95%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIGLVSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARP+
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPV 158
>gb|ATG83074.1| RNA polymerase beta' subunit (chloroplast) [Colocasia esculenta]
Length = 690
Score = 325 bits (833), Expect = e-105
Identities = 151/158 (95%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIG VSPQQI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGPVSPQQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIGAEKED KFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEDKKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>ref|YP_009239190.1| RNA polymerase beta' subunit (chloroplast) [Pedicularis ishidoyana]
gb|AML80479.1| RNA polymerase beta' subunit (chloroplast) [Pedicularis ishidoyana]
Length = 685
Score = 325 bits (832), Expect = e-105
Identities = 151/158 (95%), Positives = 153/158 (96%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNFYSMIDRYKHQQLRIGLVSPQQI WA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGLVSPQQISTWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIAN+LDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANILDKPLKELEGLVYCDFSFARPI 158
>ref|YP_009241578.1| RNA polymerase beta' subunit (chloroplast) [Lagerstroemia fauriei]
gb|AMP43558.1| RNA polymerase beta' subunit (chloroplast) [Lagerstroemia fauriei]
Length = 686
Score = 325 bits (832), Expect = e-105
Identities = 152/158 (96%), Positives = 153/158 (96%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MN NFYSMIDRYKHQQLRIG VSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNPNFYSMIDRYKHQQLRIGSVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 158
>gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburnum acerifolium]
gb|AII18579.1| RNA polymerase beta subunit (chloroplast) [Viburnum carlesii]
gb|AII18580.1| RNA polymerase beta subunit (chloroplast) [Viburnum cassinoides]
gb|AII18581.1| RNA polymerase beta subunit (chloroplast) [Viburnum clemensae]
gb|AII18582.1| RNA polymerase beta subunit (chloroplast) [Viburnum cylindricum]
gb|AII18583.1| RNA polymerase beta subunit (chloroplast) [Viburnum dentatum]
gb|AII18584.1| RNA polymerase beta subunit (chloroplast) [Viburnum dilatatum]
gb|AII18585.1| RNA polymerase beta subunit (chloroplast) [Viburnum erubescens]
gb|AII18586.1| RNA polymerase beta subunit (chloroplast) [Viburnum grandiflorum]
gb|AII18587.1| RNA polymerase beta subunit (chloroplast) [Viburnum lantanoides]
gb|AII18588.1| RNA polymerase beta subunit (chloroplast) [Viburnum lentago]
gb|AII18589.1| RNA polymerase beta subunit (chloroplast) [Viburnum lutescens]
gb|AII18590.1| RNA polymerase beta subunit (chloroplast) [Viburnum molle]
gb|AII18591.1| RNA polymerase beta subunit (chloroplast) [Viburnum opulus]
gb|AII18592.1| RNA polymerase beta subunit (chloroplast) [Viburnum plicatum]
gb|AII18593.1| RNA polymerase beta subunit (chloroplast) [Viburnum punctatum]
gb|AII18594.1| RNA polymerase beta subunit (chloroplast) [Viburnum sieboldii]
gb|AII18595.1| RNA polymerase beta subunit (chloroplast) [Viburnum taiwanianum]
gb|AII18596.1| RNA polymerase beta subunit (chloroplast) [Viburnum tinus]
gb|AII18597.1| RNA polymerase beta subunit (chloroplast) [Viburnum triphyllum]
gb|AII18598.1| RNA polymerase beta subunit (chloroplast) [Viburnum vernicosum]
Length = 152
Score = 306 bits (785), Expect = e-105
Identities = 143/151 (94%), Positives = 144/151 (95%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIG VSPQQI WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGIC CGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICTCGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 526
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|ALB78339.1| RNA polymerase beta (chloroplast) [Heuchera parviflora var.
saurensis]
Length = 689
Score = 325 bits (832), Expect = e-105
Identities = 150/158 (94%), Positives = 154/158 (97%)
Frame = +2
Query: 74 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 253
MNQNF SMIDRYKHQQLRIGLVSPQQI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 254 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 433
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 434 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPI 547
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARP+
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPV 158