BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00035732
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263991.1| pentatricopeptide repeat-containing protein ...   166   3e-47
gb|ONK69086.1| uncharacterized protein A4U43_C05F19140 [Asparagu...    70   3e-21
pdb|5IWW|D Chain D, Crystal structure of RNA editing factor of d...    94   2e-20
ref|XP_018482768.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-18
gb|OAY69555.1| Pentatricopeptide repeat-containing protein, mito...    90   2e-18
ref|XP_013635996.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-18
ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-18
ref|XP_018507534.1| PREDICTED: putative pentatricopeptide repeat...    86   4e-18
ref|XP_018482769.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-18
ref|XP_010925535.2| PREDICTED: pentatricopeptide repeat-containi...    88   7e-18
gb|KVH87390.1| hypothetical protein Ccrd_025379 [Cynara carduncu...    88   7e-18
ref|XP_015873003.1| PREDICTED: pentatricopeptide repeat-containi...    87   9e-18
ref|XP_024159702.1| pentatricopeptide repeat-containing protein ...    88   9e-18
gb|OAY62814.1| Pentatricopeptide repeat-containing protein, chlo...    88   9e-18
ref|XP_020108041.1| putative pentatricopeptide repeat-containing...    88   9e-18
ref|XP_015057231.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-17
ref|XP_009141464.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-17
gb|PHT31777.1| Pentatricopeptide repeat-containing protein, mito...    87   2e-17
gb|OVA20806.1| Pentatricopeptide repeat [Macleaya cordata]             87   2e-17
ref|XP_024183278.1| pentatricopeptide repeat-containing protein ...    87   2e-17

>ref|XP_020263991.1| pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Asparagus officinalis]
          Length = 443

 Score =  166 bits (420), Expect = 3e-47
 Identities = 83/118 (70%), Positives = 94/118 (79%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LIDAY KCG +   +++L+EFP+PDLP YNAAITGLSK+ EYESAL+VF   R  GLD 
Sbjct: 50  ALIDAYCKCGHIDCVLRLLEEFPNPDLPIYNAAITGLSKQEEYESALQVFHGMRVEGLDS 109

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           NRTT S  I ACGRL+ E  GRAIHG VVK G EVR DVSVN+ALVFMYPRFGDLDSA
Sbjct: 110 NRTTLSGVIMACGRLVDEKFGRAIHGHVVKAGEEVRGDVSVNSALVFMYPRFGDLDSA 167



 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSR-AAGLD 178
           +LI+ Y++   L  A ++ DE P  ++ ++N+ I G S+ G    AL +F R R +  L 
Sbjct: 251 TLINMYIRLNSLVDAQKLFDEMPRSEMGSWNSLILGYSRNGHPREALNLFYRLRDSKNLL 310

Query: 177 PNRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
            N  T + A++AC  L     G+AIH  ++ +G  ++ D+ +NT+LV MY + G L++A
Sbjct: 311 ANSITLAGALSACASLGVIEEGKAIHEYIMNIG--MKMDLIINTSLVNMYCKCGSLETA 367


>gb|ONK69086.1| uncharacterized protein A4U43_C05F19140 [Asparagus officinalis]
          Length = 604

 Score = 70.5 bits (171), Expect(2) = 3e-21
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = -3

Query: 129 LGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           L   +GRAIHG VVKVG +VRDDVSVN+ALVFMYPRFGDLD A
Sbjct: 43  LYRNIGRAIHGYVVKVGRDVRDDVSVNSALVFMYPRFGDLDPA 85



 Score = 58.9 bits (141), Expect(2) = 3e-21
 Identities = 30/43 (69%), Positives = 33/43 (76%)
 Frame = -1

Query: 344 MPT*NVGSLGLQFRCSMNFLTRTCPHITLQLRACRSGGSMNLL 216
           M T NV +LGLQF CSMN LTR CP ITL+L AC+S GSMN L
Sbjct: 1   MLTPNVANLGLQFSCSMNCLTRICPLITLRLLACQSRGSMNWL 43



 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSR-AAGLD 178
           SLID Y +   L  A ++ D  P  ++ ++N+ I G +K G    AL +F R R    L 
Sbjct: 169 SLIDMYARLNSLVDAQKLFDVKPRSEMGSWNSLILGYAKNGYPREALNLFYRLRDHRNLC 228

Query: 177 PNRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           PN  +F  A+ AC  L     G+ IH   V  G +V  D  + T+L+ MY + G +D+A
Sbjct: 229 PNSISFLGALNACAALGAVKEGKVIHDYFVNSGFKV--DRIIGTSLIDMYSKCGCVDTA 285


>pdb|5IWW|D Chain D, Crystal structure of RNA editing factor of designer
           PLS-type PPR/9R protein in complex with MORF9/RIP9
          Length = 347

 Score = 94.0 bits (232), Expect = 2e-20
 Identities = 53/118 (44%), Positives = 70/118 (59%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LID Y KCG L  A +V DE P+ D+ TYN  I GL K G+ + AL++F      G+ P
Sbjct: 92  ALIDMYSKCGLLEEARKVFDEMPEKDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 151

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  TFSS + AC RL    LG+ IHG V+K G E   +V V  AL+ MY + G L+ A
Sbjct: 152 DEFTFSSVLKACARLGALELGKQIHGYVIKSGFE--SNVVVYNALIDMYSKCGLLEEA 207



 Score = 94.0 bits (232), Expect = 2e-20
 Identities = 53/118 (44%), Positives = 70/118 (59%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LID Y KCG L  A +V DE P+ D+ TYN  I GL K G+ + AL++F      G+ P
Sbjct: 193 ALIDMYSKCGLLEEARKVFDEMPEKDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 252

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  TFSS + AC RL    LG+ IHG V+K G E   +V V  AL+ MY + G L+ A
Sbjct: 253 DEFTFSSVLKACARLGALELGKQIHGYVIKSGFE--SNVVVYNALIDMYSKCGLLEEA 308



 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 40/94 (42%), Positives = 54/94 (57%)
 Frame = -3

Query: 282 PDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDPNRTTFSSAITACGRLLGEGLGRAI 103
           P + TYN  I GL K G+ + AL++F      G+ P+  TFSS + AC RL    LG+ I
Sbjct: 15  PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDEFTFSSVLKACARLGALELGKQI 74

Query: 102 HGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           HG V+K G E   +V V  AL+ MY + G L+ A
Sbjct: 75  HGYVIKSGFE--GNVVVYNALIDMYSKCGLLEEA 106


>ref|XP_018482768.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760
           [Raphanus sativus]
          Length = 584

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 47/118 (39%), Positives = 72/118 (61%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L+  Y KCG +G+A +V DE P   +  +N+ ++GL + G  E A+RVF + R +GL+P
Sbjct: 148 ALVAFYAKCGDVGVARKVFDEMPVKSVVAWNSLVSGLEQNGLGEEAIRVFYQMRDSGLEP 207

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  TF S + AC +  G GLG  +H  +V  G E+  +V + TALV +Y R GD+  A
Sbjct: 208 DSATFVSVLAACAQTGGIGLGSWVHRYIVDKGFEM--NVKLGTALVNLYSRCGDVGKA 263


>gb|OAY69555.1| Pentatricopeptide repeat-containing protein, mitochondrial [Ananas
           comosus]
          Length = 587

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 51/118 (43%), Positives = 67/118 (56%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L+D Y KCG L  A +V DE P  DL T+ A I G  + G++   L +F R R+ G   
Sbjct: 168 ALVDMYAKCGSLVAAREVFDEMPVRDLATWGAMICGTMQGGDWSEGLVLFRRMRSEGFGI 227

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +    ++ I ACGRL   GLG A+HGLVVK G  V  D+ V  AL+ MY + GD   A
Sbjct: 228 DSAILATVIPACGRLGAPGLGMALHGLVVKFG--VIGDLCVANALIDMYCKCGDTQIA 283



 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 33/113 (29%), Positives = 56/113 (49%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LID Y KCG   +A ++       D+ ++++ I G  +  E+  +L +F     +GL P
Sbjct: 269 ALIDMYCKCGDTQIADRLFRTMEFKDVISWSSLIAGYLQNNEFAKSLGLFVEKMESGLTP 328

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFG 16
           N    +S + +   L    LG+ IHG  V+ G E   D  V +A++  Y + G
Sbjct: 329 NSVAIASIMPSVSELKLFKLGKEIHGYAVRRGHE--RDRFVASAVIGFYCKNG 379


>ref|XP_013635996.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760
           [Brassica oleracea var. oleracea]
          Length = 579

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 48/118 (40%), Positives = 72/118 (61%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           SL+  Y KCG +G A +V DE P   +  +N+ ++GL + G  E A+RVF + R +GL+P
Sbjct: 143 SLVALYAKCGDVGGARKVFDEMPVKSVVAWNSLVSGLEQNGLGEEAIRVFYQMRESGLEP 202

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  TF S ++AC +  G GLG  +H  +V  G E+  +V + TALV +Y R GD+  A
Sbjct: 203 DSATFVSVLSACAQTGGIGLGSWVHRYIVDNGLEL--NVKLGTALVNLYSRCGDVGKA 258


>ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containing protein At3g03580
           [Fragaria vesca subsp. vesca]
          Length = 764

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 49/113 (43%), Positives = 70/113 (61%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LID Y + G+LG A QV DE  + D+ ++N+ I+G S  G +E AL +F R R  GL P
Sbjct: 157 ALIDMYARLGELGHARQVFDEMRERDVVSWNSLISGYSSNGYWEEALEMFWRLRMEGLVP 216

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFG 16
           +  + SS + ACG L+    GR +HGLV K+G  V  DV V+  ++ MY +FG
Sbjct: 217 DCFSISSVLPACGSLVDVKEGRLVHGLVEKIG--VNADVLVSNGILAMYFKFG 267



 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 36/117 (30%), Positives = 58/117 (49%)
 Frame = -3

Query: 351 LIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDPN 172
           L+D Y KCG+L  A++V D     D+ T+N+ I+      +    LR+  R R  G+  +
Sbjct: 459 LVDLYAKCGKLQDALKVFDSMTARDIVTWNSIISACFHNEDCSLGLRMVLRMRNEGVMLD 518

Query: 171 RTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
             T    +  C  L  +  G+ IHG + ++G     DV V  AL+ MY   G L+++
Sbjct: 519 VATMLGILPVCSLLAAKRKGQEIHGCIFRLG--YHSDVPVGNALIEMYSSCGSLETS 573


>ref|XP_018507534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580 [Pyrus x bretschneideri]
          Length = 208

 Score = 85.5 bits (210), Expect = 4e-18
 Identities = 44/119 (36%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAG-LD 178
           +LI+ Y KCGQ+G AV+V DEF  PD+  + + +TG  + G+ E AL  F+R    G ++
Sbjct: 75  ALIELYSKCGQIGEAVKVFDEFLHPDVFLWTSMVTGYEQNGDPEEALEFFSRMVMVGRIN 134

Query: 177 PNRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           P+R T  SA++AC +L    +G  +HG+ ++ G     D+S+  AL+ +Y + G + +A
Sbjct: 135 PDRVTLVSAVSACAQLSNFRIGSCVHGVSIRNG--FNSDLSLGNALLNLYAKTGSVKTA 191


>ref|XP_018482769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Raphanus sativus]
          Length = 584

 Score = 88.6 bits (218), Expect = 5e-18
 Identities = 46/113 (40%), Positives = 69/113 (61%)
 Frame = -3

Query: 339 YLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDPNRTTF 160
           Y KCG +G+A +V DE P   +  +N+ ++GL + G  E A+RVF + R +GL+P+  TF
Sbjct: 153 YAKCGDVGVARKVFDEMPVKSVVAWNSLVSGLEQNGLGEEAIRVFYQMRESGLEPDSATF 212

Query: 159 SSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
            S + AC +  G GLG  +H  +V  G E+  +V + TALV +Y R GD+  A
Sbjct: 213 VSVLAACAQTGGIGLGSWVHRYIVDKGFEM--NVKLGTALVNLYSRCGDVGKA 263


>ref|XP_010925535.2| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Elaeis guineensis]
          Length = 655

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 50/118 (42%), Positives = 70/118 (59%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L  AY+K   L  A++V D  P+P LP++NA I+G S+RG +E +LR F R R  G  P
Sbjct: 105 ALTGAYMKLRLLQDALKVFDGIPNPTLPSFNAIISGFSQRGHFEESLRAFERLRMEGFRP 164

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           N  T +S + ACG L+    G+ +HGL +K+G E   D  V TAL+ MY    +L  A
Sbjct: 165 NSVTIASVLPACGTLV---QGKQLHGLSIKMGHE--SDGYVATALLTMYSNCAELGLA 217



 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTR-SRAAGLD 178
           +L+  Y  C +LGLA +V     + ++ +YNA I+G  + G +  AL +F   +   G  
Sbjct: 203 ALLTMYSNCAELGLARRVFQLIDEKNIVSYNAMISGFLQNGAFFLALNLFRELTTLHGRQ 262

Query: 177 PNRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMY 28
            N +T    ++ C +LL   LG+ IH   +K   EV DDV + TAL+ MY
Sbjct: 263 INASTLLCILSVCSKLLALLLGKQIHCYYLKC--EVGDDVKIETALLGMY 310


>gb|KVH87390.1| hypothetical protein Ccrd_025379 [Cynara cardunculus var. scolymus]
          Length = 684

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 48/118 (40%), Positives = 71/118 (60%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           SL+  Y KCG  GLAVQV DE P+ D+  +NAA++   + G+YE AL +F + +  G +P
Sbjct: 146 SLLGMYAKCGVFGLAVQVFDEMPERDVACWNAAVSCYHQDGQYEKALDLFGKMKDHGYEP 205

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  +F++AI+AC +L+    GR IH   V+ G E   D  V  A + MY + G L+ A
Sbjct: 206 DSVSFTTAISACAKLMNLERGREIHTEAVRNGFE--SDGFVQAAAIDMYGKCGCLEMA 261



 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -3

Query: 348 IDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAG-LDPN 172
           ID Y KCG L +AVQV ++ P   L ++N+ I G S +G+ +S +++ +R    G   PN
Sbjct: 249 IDMYGKCGCLEMAVQVFEQIPFKSLVSWNSMIAGYSLKGDSKSCIQLLSRMNVEGRTKPN 308

Query: 171 RTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
            TT SS++ AC +      G+ IHG +++    ++ D  + ++L+ +Y + G   SA
Sbjct: 309 STTLSSSLMACSKSANLKHGKFIHGYIIR--NNLKADAFIYSSLLDLYFKCGHAQSA 363



 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 40/118 (33%), Positives = 59/118 (50%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           SL+D Y KCG    A  +  + P  ++  +N  I+G    G Y  AL  +    AAG+ P
Sbjct: 349 SLLDLYFKCGHAQSAESIFKKMPKTNVVEWNLMISGYVAVGLYLEALETYNAMNAAGVAP 408

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  TF+S + AC +L     G+ IH  +  V GE   +  V  AL+ MY + G +D A
Sbjct: 409 DGITFTSILAACTQLGALEKGKDIHRSI--VSGEFESNEIVMGALLDMYTKCGAIDEA 464


>ref|XP_015873003.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Ziziphus jujuba]
          Length = 328

 Score = 86.7 bits (213), Expect = 9e-18
 Identities = 45/118 (38%), Positives = 72/118 (61%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           SL++ Y KCG +  ++ + +E PD D+  +   ITGLS  G  E A  +F + + AG++P
Sbjct: 55  SLVELYSKCGFVTSSLALFNEIPDHDVVAWTTIITGLSGNGNMEYARWLFYKMQLAGVEP 114

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           N  TFS+ ++AC  +     G+ +HGLV+K G  + +DV V +A V MY + GD++ A
Sbjct: 115 NSFTFSTLLSACANINALQRGKQLHGLVLKHG--LENDVVVGSATVDMYSKCGDMEDA 170


>ref|XP_024159702.1| pentatricopeptide repeat-containing protein At2g33760 [Rosa
           chinensis]
 gb|PRQ28934.1| putative tetratricopeptide-like helical domain, DYW
           domain-containing protein [Rosa chinensis]
          Length = 583

 Score = 87.8 bits (216), Expect = 9e-18
 Identities = 45/118 (38%), Positives = 72/118 (61%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L+  Y KCG+ G+A +V DE P+  +  +N+ I+G  + G    A+ VF   R AG++P
Sbjct: 149 ALVSLYSKCGEFGVARKVFDEMPERSVVGWNSMISGYEQNGFSREAIEVFKEMREAGVEP 208

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           + T F + + AC +L   GLG ++H  VV+ G EV  +V++ T+L+ MY R GD+  A
Sbjct: 209 DSTGFVNVLAACSQLGDVGLGCSVHDEVVRKGIEV--NVALGTSLINMYARCGDVSKA 264


>gb|OAY62814.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
           comosus]
          Length = 633

 Score = 87.8 bits (216), Expect = 9e-18
 Identities = 50/118 (42%), Positives = 67/118 (56%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L+D Y KCG L  A +V +E P  DL T+ A I G  + G++   L +F R R+ G   
Sbjct: 170 ALVDMYAKCGSLVAAREVFNEMPVRDLATWGAMICGTMQGGDWSEGLVLFRRMRSEGFGI 229

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +    ++ I ACGRL   GLG A+HGLVVK G  V  D+ V  AL+ MY + GD   A
Sbjct: 230 DSAILATVIPACGRLGAPGLGMALHGLVVKFG--VIGDLCVANALIDMYCKCGDTQIA 285



 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 33/113 (29%), Positives = 56/113 (49%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LID Y KCG   +A ++       D+ ++++ I G  +  E+  +L +F     +GL P
Sbjct: 271 ALIDMYCKCGDTQIADRLFRTMEFKDVISWSSLIAGYLQNNEFAKSLGLFVEKMESGLTP 330

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFG 16
           N    +S + +   L    LG+ IHG  V+ G E   D  V +A++  Y + G
Sbjct: 331 NSVVIASIMPSVSELKLFKLGKEIHGYAVRRGHE--RDRFVASAVIGFYCKNG 381


>ref|XP_020108041.1| putative pentatricopeptide repeat-containing protein At3g01580
           [Ananas comosus]
 ref|XP_020108042.1| putative pentatricopeptide repeat-containing protein At3g01580
           [Ananas comosus]
          Length = 677

 Score = 87.8 bits (216), Expect = 9e-18
 Identities = 50/118 (42%), Positives = 67/118 (56%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L+D Y KCG L  A +V +E P  DL T+ A I G  + G++   L +F R R+ G   
Sbjct: 170 ALVDMYAKCGSLVAAREVFNEMPVRDLATWGAMICGTMQGGDWSEGLVLFRRMRSEGFGI 229

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +    ++ I ACGRL   GLG A+HGLVVK G  V  D+ V  AL+ MY + GD   A
Sbjct: 230 DSAILATVIPACGRLGAPGLGMALHGLVVKFG--VIGDLCVANALIDMYCKCGDTQIA 285



 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           SL+D Y KCG +  A ++ D   + +  TYN  IT L   G  E  +  F   +   ++P
Sbjct: 473 SLMDMYCKCGFVEFAKKIFDTMTERNTVTYNIVITALGMHGRGEEGIEFFDHMKEQSIEP 532

Query: 174 NRTTFSSAITAC--GRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           ++ TF + ++AC   RLL +GL  + +  ++K  G +  D    + +V +Y R G +D A
Sbjct: 533 DKVTFIALLSACSHARLLEKGL--SFYNFMIKEYG-ICPDKEHYSCIVDLYSRAGRVDDA 589



 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 33/113 (29%), Positives = 56/113 (49%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LID Y KCG   +A ++       D+ ++++ I G  +  E+  +L +F     +GL P
Sbjct: 271 ALIDMYCKCGDTQIADRLFRTMEFKDVISWSSLIAGYLQNNEFAKSLGLFVEKMESGLTP 330

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFG 16
           N    +S + +   L    LG+ IHG  V+ G E   D  V +A++  Y + G
Sbjct: 331 NSVVIASIMPSVSELKLFKLGKEIHGYAVRRGHE--RDRFVASAVIGFYCKNG 381


>ref|XP_015057231.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial [Solanum pennellii]
 ref|XP_015057232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial [Solanum pennellii]
 ref|XP_015057233.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial [Solanum pennellii]
 ref|XP_015057234.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial [Solanum pennellii]
 ref|XP_015057235.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial [Solanum pennellii]
          Length = 653

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 51/116 (43%), Positives = 67/116 (57%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LI+ Y KC  +G A +V DE P+ D+ ++ A ITG S+    +  L +FT     G  P
Sbjct: 120 TLINMYAKCESMGDARKVFDEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMP 179

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLD 7
           N+ TF S I A G L  EG GR +HG  VK G E  D+V V +ALV MY R G +D
Sbjct: 180 NQFTFGSVIKAAGALESEGTGRQLHGACVKCGYE--DNVYVGSALVDMYARCGLMD 233



 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 35/118 (29%), Positives = 59/118 (50%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L+D Y +CG +     V D+    +  ++N  I G +++GE E AL++F   +  G  P
Sbjct: 221 ALVDMYARCGLMDEGKIVFDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQP 280

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
              TFSS   AC  +     G+ +H  ++K G E+     +   L+ MY + G +D A
Sbjct: 281 THFTFSSVYAACANIGALEPGKWVHVHMIKSGLEL--IAFIGNTLLDMYAKSGSIDDA 336


>ref|XP_009141464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760
           [Brassica rapa]
 ref|XP_013744521.1| pentatricopeptide repeat-containing protein At2g33760-like
           [Brassica napus]
          Length = 579

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 47/118 (39%), Positives = 71/118 (60%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           SL+  Y KCG +G A +V DE P   +  +N+ ++GL + G  E A+RVF + R +GL+P
Sbjct: 143 SLVALYGKCGDVGGARKVFDEMPVKSVVAWNSLVSGLEQNGLGEEAIRVFYQMRESGLEP 202

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  TF S ++AC +  G GLG  +H  +   G E+  +V + TALV +Y R GD+  A
Sbjct: 203 DSATFVSVLSACAQTGGIGLGSWVHRYIADNGFEL--NVKLGTALVNLYSRCGDVGKA 258


>gb|PHT31777.1| Pentatricopeptide repeat-containing protein, mitochondrial
           [Capsicum baccatum]
          Length = 656

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 51/118 (43%), Positives = 68/118 (57%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LI+ Y KC  +G A +V DE  + D+ ++ A ITG S+    E AL VF      G  P
Sbjct: 123 TLINMYAKCECMGYARKVFDEMRERDMVSWTALITGYSQNEGSEEALGVFVEMLRCGFMP 182

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           N+ TF S + A G L G G GR +HG+ VK G E  ++V V +ALV MY R G +D A
Sbjct: 183 NQFTFGSVLKAAGGLGGGGTGRQLHGICVKCGYE--ENVYVGSALVDMYARCGLMDEA 238



 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 35/118 (29%), Positives = 61/118 (51%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +L+D Y +CG +  A  V D+    +  ++N  I G +++GE E A+++F   +  G  P
Sbjct: 224 ALVDMYARCGLMDEAKIVFDKMSCKNEVSWNGLIAGHARKGEGEIAVKLFAEMKRGGFQP 283

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  TFSS   AC  +     G+ +H  ++K G E+     +   L+ MY + G +D A
Sbjct: 284 SHFTFSSVYAACASIGALEPGKWLHVHMIKSGLEL--IAFIGNTLLDMYAKSGSIDDA 339


>gb|OVA20806.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 704

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 41/119 (34%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRS-RAAGLD 178
           +L++ Y KCG++G A+ V +EFP+PD+  + + ITG  + G  E AL  F+R     GL 
Sbjct: 147 ALVELYAKCGEMGDALGVFEEFPEPDVVLWTSMITGYQQNGNAEKALSFFSRMVMDEGLT 206

Query: 177 PNRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           P+R T  S +++C +L+  G G+ +HG  +K+G +   D+S+  + + +Y + G + +A
Sbjct: 207 PDRVTLVSVVSSCAQLMNLGAGKCVHGFTIKMGFDT--DLSLVNSFLNLYAKTGSIRNA 263



 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
 Frame = -3

Query: 339 YLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTR----SRAAGLDPN 172
           Y K   L LA ++ DE PD  +  +N+ +    +  ++E  L +F      +      P+
Sbjct: 46  YTKYSSLELARKLFDETPDRTVYLWNSILRSHCREKQWEVTLHLFNNMLSTTSTMSDKPD 105

Query: 171 RTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
             T   AI AC  LL    G+ IHGL VK   ++  D+ V +ALV +Y + G++  A
Sbjct: 106 NFTVPIAIKACAGLLALRTGKTIHGL-VKKNDKINSDMFVGSALVELYAKCGEMGDA 161



 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 35/118 (29%), Positives = 61/118 (51%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           S ++ Y K G +  A  + ++  + D+ ++++ I+  ++  + + AL +F +      DP
Sbjct: 249 SFLNLYAKTGSIRNARNLFEKMYEKDVISWSSMISCYAQNQKPDEALSLFNQMVEKRYDP 308

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           N  T  S + AC        GR IH L  + G E+  DVSV+TALV MY +   ++ A
Sbjct: 309 NSVTLVSVLQACAAAGNVDEGRRIHELAKRKGCEL--DVSVSTALVDMYMKCSCIEKA 364


>ref|XP_024183278.1| pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic [Rosa chinensis]
 gb|PRQ50784.1| putative tetratricopeptide-like helical domain, DYW
           domain-containing protein [Rosa chinensis]
          Length = 878

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 50/118 (42%), Positives = 70/118 (59%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LI  Y+KCG +G A  + D  P  D  ++NA I+G  + GEY   LR+F   R   +DP
Sbjct: 239 ALITMYVKCGVVGSARVLFDRMPRRDRISWNAMISGYFENGEYLEGLRLFLMMRENSVDP 298

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           +  T +S ++AC  L  + LGR IHG V+K   E+ DDVSV ++L+ MY   GDL  A
Sbjct: 299 DLMTVTSLLSACEVLGDDKLGREIHGYVLKT--ELVDDVSVCSSLIQMYSVVGDLGEA 354



 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 38/118 (32%), Positives = 57/118 (48%)
 Frame = -3

Query: 354 SLIDAYLKCGQLGLAVQVLDEFPDPDLPTYNAAITGLSKRGEYESALRVFTRSRAAGLDP 175
           +LID Y KC  +  A++V  + P  ++ ++ + I GL        AL +F R     L P
Sbjct: 441 TLIDMYSKCKCIDKALEVFHQIPGKNVISWTSIILGLRINNRCFEAL-IFFRQMKLRLKP 499

Query: 174 NRTTFSSAITACGRLLGEGLGRAIHGLVVKVGGEVRDDVSVNTALVFMYPRFGDLDSA 1
           N  T  S + AC R+     G+ IH   ++ G  V  D  +  AL+ MY R G + SA
Sbjct: 500 NSITLVSVLAACARIGALMCGKEIHAHALRSG--VAFDGFLPNALLDMYVRCGRMGSA 555