BLASTX nr result

ID: Ophiopogon23_contig00035657 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00035657
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010662001.1| PREDICTED: putative F-box protein At5g55150 ...    59   3e-07
gb|PIA56627.1| hypothetical protein AQUCO_00700763v1 [Aquilegia ...    57   2e-06
ref|XP_015897868.1| PREDICTED: F-box protein SKIP23-like [Ziziph...    55   6e-06
ref|XP_015889784.1| PREDICTED: F-box protein SKIP23-like [Ziziph...    55   9e-06
ref|XP_021600078.1| F-box protein SKIP23-like [Manihot esculenta...    55   9e-06

>ref|XP_010662001.1| PREDICTED: putative F-box protein At5g55150 [Vitis vinifera]
          Length = 396

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = -1

Query: 416 GFEVFKLDRTERESRWSKVRSIGEDVMFVDAHHGVAVPSCDYASGCRGNCIVFLD---ET 246
           GF ++KL  +    +WS+VRS+G+  +F+  +H  +V + D+ +GC+ N I F D   E 
Sbjct: 288 GFMIYKLVDSLENPKWSRVRSLGDVSLFLGDNHSTSVRASDF-TGCQPNSIFFCDDYFEY 346

Query: 245 TLFRSYPVDDATCFRLVDIGTDQIERLPYVHKSMKERKDPSWFIPSL*C 99
              R  P D   C    D+    I R   +H S K    P W +P   C
Sbjct: 347 YYLRGGPTDIGVC----DLHDGTIRRHYSLHSSQKLMPPPLWILPKFVC 391


>gb|PIA56627.1| hypothetical protein AQUCO_00700763v1 [Aquilegia coerulea]
          Length = 416

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = -1

Query: 413 FEVFKLDRTERESRWSKVRSIGEDVMFVDAHHGVAVPSCDYASGCRGNCIVFLDETTL-F 237
           F+V+KLD T R  +W +V S+GE  +F+  +  V+VP+ +Y+   + NCI F D+ T+ +
Sbjct: 313 FDVYKLDFTNR--KWEQVNSLGEYCLFLGFNTSVSVPAVNYSESLKKNCIYFTDDFTIGY 370

Query: 236 RSYPVDDATCFRLVDIGTDQIERLPYVHKSMKERKDPSWFIPSL 105
           R   +   +   + D+    I+   Y  +S      P W IP+L
Sbjct: 371 RGLDIPGGSDMGVFDMEDKSIQP-HYKGESTCYYSPPLWLIPTL 413


>ref|XP_015897868.1| PREDICTED: F-box protein SKIP23-like [Ziziphus jujuba]
          Length = 369

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/68 (36%), Positives = 44/68 (64%)
 Frame = -1

Query: 413 FEVFKLDRTERESRWSKVRSIGEDVMFVDAHHGVAVPSCDYASGCRGNCIVFLDETTLFR 234
           F+VFKL+  ERE  W +V+S+ + VMF+       V + D+ +GC+G+CI+F D  + F 
Sbjct: 286 FKVFKLNAKERE--WVEVKSLDDKVMFLGGDCSFCVAAKDFGNGCKGDCILFTDYCSTFS 343

Query: 233 SYPVDDAT 210
            + ++D++
Sbjct: 344 VFNLEDSS 351


>ref|XP_015889784.1| PREDICTED: F-box protein SKIP23-like [Ziziphus jujuba]
          Length = 369

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 25/68 (36%), Positives = 43/68 (63%)
 Frame = -1

Query: 413 FEVFKLDRTERESRWSKVRSIGEDVMFVDAHHGVAVPSCDYASGCRGNCIVFLDETTLFR 234
           F+VFKL   ERE  W +V+S+ + VMF+       V + D+ +GC+G+CI+F D  + F 
Sbjct: 286 FKVFKLSAKERE--WVEVKSLDDKVMFLGGDCSFCVAAKDFGNGCKGDCILFTDYCSTFS 343

Query: 233 SYPVDDAT 210
            + ++D++
Sbjct: 344 VFNLEDSS 351


>ref|XP_021600078.1| F-box protein SKIP23-like [Manihot esculenta]
 gb|OAY22561.1| hypothetical protein MANES_18G008400 [Manihot esculenta]
          Length = 422

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
 Frame = -1

Query: 413 FEVFKLDRTERESRWSKVRSIGEDVMFVDAHHGVAVPSCDYASGCRGNCIVFLD---ETT 243
           FEVF+LDR+    RW +VR++G+ V+F+  +  +++ + D+ SGC GNCI   D   ET 
Sbjct: 319 FEVFRLDRSG--PRWVRVRNLGDKVLFIGENSSLSLSATDF-SGCIGNCIYHTDDYSETN 375

Query: 242 LFRSYPVDDATCFRLVDIGTDQIERLPYVHKSMKERK---DPSWFIPS 108
               +   D   F+L D     IE LP   ++   R     P W  P+
Sbjct: 376 YDGHFREHDLGIFKLWD---GSIEALPCYPRNFLSRSPWPPPIWISPN 420


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