BLASTX nr result

ID: Ophiopogon23_contig00034340 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00034340
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMT09508.1| hypothetical protein BVRB_6g129750 [Beta vulgaris...    52   3e-06

>gb|KMT09508.1| hypothetical protein BVRB_6g129750 [Beta vulgaris subsp. vulgaris]
          Length = 95

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = +1

Query: 271 LQGGNGAPQSPRFPVNPLASRLVVCAGIIPLSLFPETSNT 390
           LQGG+GAPQSP  P N  A  L +C GI PL+LF +TSN+
Sbjct: 21  LQGGSGAPQSPELPENAEAGMLALCGGISPLNLFLDTSNS 60


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