BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00034208
         (1951 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264489.1| LOW QUALITY PROTEIN: probable RNA-dependent ...  1056   0.0  
gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagu...  1056   0.0  
ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polyme...   869   0.0  
ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polyme...   855   0.0  
ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ana...   838   0.0  
gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas c...   800   0.0  
ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polyme...   801   0.0  
gb|PKA52670.1| putative RNA-dependent RNA polymerase 2 [Apostasi...   778   0.0  
gb|OVA03721.1| RNA recognition motif domain [Macleaya cordata]        775   0.0  
gb|AIO05709.1| RNA-dependent RNA polymerase 2, partial [Cocos nu...   744   0.0  
gb|PON93354.1| RNA-dependent RNA polymerase-type [Trema orientalis]   751   0.0  
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   748   0.0  
ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   742   0.0  
emb|CDP19325.1| unnamed protein product [Coffea canephora]            746   0.0  
ref|XP_007211312.1| RNA-dependent RNA polymerase 2 [Prunus persi...   745   0.0  
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...   744   0.0  
ref|XP_019197287.1| PREDICTED: RNA-dependent RNA polymerase 2 [I...   743   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   742   0.0  
gb|PON61085.1| RNA-dependent RNA polymerase-type [Parasponia and...   741   0.0  
ref|XP_021825973.1| RNA-dependent RNA polymerase 2 isoform X1 [P...   741   0.0  

>ref|XP_020264489.1| LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 2
            [Asparagus officinalis]
          Length = 1120

 Score = 1056 bits (2730), Expect = 0.0
 Identities = 520/648 (80%), Positives = 582/648 (89%)
 Frame = +3

Query: 6    MLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNT 185
            M+ I +EDGGE YKLEV F DVVNSF C +GN  E NAVLLQL+YAPKI+HR CGPSLNT
Sbjct: 143  MMAISLEDGGEVYKLEVPFGDVVNSFACRIGNGMEHNAVLLQLQYAPKIYHRICGPSLNT 202

Query: 186  RFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELG 365
            +FNSARYHFCK+DV+FLWVR PDFSATSVIGRS +LCLELANGLS+SKI+K+LPFFGELG
Sbjct: 203  KFNSARYHFCKEDVEFLWVRAPDFSATSVIGRSYYLCLELANGLSSSKIIKSLPFFGELG 262

Query: 366  NLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSG 545
            NL+L  GE   SSSKL PI+NCP DCTV YEVLFQLNSLVH+QKISSA++NS+LF VLS 
Sbjct: 263  NLMLMPGEVFCSSSKLVPILNCPGDCTVSYEVLFQLNSLVHLQKISSAHVNSNLFSVLSQ 322

Query: 546  LSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNLSSNKNGPQENLMSCRRVLVT 725
            LS DT  +ILM MHKLNSTC++P+YFI ++LSRF KQQ+LSS+ N  QE LMSCRRVL+T
Sbjct: 323  LSSDTAIKILMMMHKLNSTCHKPIYFIQNHLSRFGKQQSLSSDGNR-QEKLMSCRRVLIT 381

Query: 726  PSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYR 905
            PSKVYFLGPELET NY+VKH+SAYASDFLRVTF DEDRCKLP +AIS RIGKDIFSK YR
Sbjct: 382  PSKVYFLGPELETSNYVVKHFSAYASDFLRVTFVDEDRCKLPSQAISTRIGKDIFSKPYR 441

Query: 906  TGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDE 1085
            TGIYNR+L+VLRDGISIGSKKFEFLAFSASQLRD+S WMFASND VTA+ IREWMGQF+E
Sbjct: 442  TGIYNRILSVLRDGISIGSKKFEFLAFSASQLRDSSIWMFASNDFVTASSIREWMGQFNE 501

Query: 1086 IYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQ 1265
            IYSVSKCAARMGQLFSSSTPTFNVPS +V+VIPDIET TDG+KYCFSDGIGKIS+PFA+Q
Sbjct: 502  IYSVSKCAARMGQLFSSSTPTFNVPSREVKVIPDIETNTDGVKYCFSDGIGKISVPFAKQ 561

Query: 1266 VAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQ 1445
            VAKK GLS+TPSAFQIRYGGYKGVI +DRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQ
Sbjct: 562  VAKKLGLSNTPSAFQIRYGGYKGVITIDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQ 621

Query: 1446 PCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIKTAVK 1625
            PC+LNREIV LLSTLGVDD IFE+LQHDQ RLLD+MLT +EAAL VL RM+GS IKTA+K
Sbjct: 622  PCYLNREIVILLSTLGVDDEIFELLQHDQMRLLDNMLTSKEAALRVLGRMKGSAIKTALK 681

Query: 1626 MLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYV 1805
            ML HGY PDSEPYLL LLKAYREYQLSDIRSRCR+FVP+ RVLIGCLDELGTL+YGQV++
Sbjct: 682  MLMHGYAPDSEPYLLALLKAYREYQLSDIRSRCRIFVPRARVLIGCLDELGTLEYGQVFL 741

Query: 1806 RVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            +V+M +EEL+NP+Q FF+K+D+STA        TKNPCLHPGDIRV+E
Sbjct: 742  KVSMTDEELQNPDQAFFTKVDRSTAVVVGKVVITKNPCLHPGDIRVVE 789


>gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagus officinalis]
          Length = 999

 Score = 1056 bits (2730), Expect = 0.0
 Identities = 520/648 (80%), Positives = 582/648 (89%)
 Frame = +3

Query: 6    MLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNT 185
            M+ I +EDGGE YKLEV F DVVNSF C +GN  E NAVLLQL+YAPKI+HR CGPSLNT
Sbjct: 22   MMAISLEDGGEVYKLEVPFGDVVNSFACRIGNGMEHNAVLLQLQYAPKIYHRICGPSLNT 81

Query: 186  RFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELG 365
            +FNSARYHFCK+DV+FLWVR PDFSATSVIGRS +LCLELANGLS+SKI+K+LPFFGELG
Sbjct: 82   KFNSARYHFCKEDVEFLWVRAPDFSATSVIGRSYYLCLELANGLSSSKIIKSLPFFGELG 141

Query: 366  NLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSG 545
            NL+L  GE   SSSKL PI+NCP DCTV YEVLFQLNSLVH+QKISSA++NS+LF VLS 
Sbjct: 142  NLMLMPGEVFCSSSKLVPILNCPGDCTVSYEVLFQLNSLVHLQKISSAHVNSNLFSVLSQ 201

Query: 546  LSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNLSSNKNGPQENLMSCRRVLVT 725
            LS DT  +ILM MHKLNSTC++P+YFI ++LSRF KQQ+LSS+ N  QE LMSCRRVL+T
Sbjct: 202  LSSDTAIKILMMMHKLNSTCHKPIYFIQNHLSRFGKQQSLSSDGNR-QEKLMSCRRVLIT 260

Query: 726  PSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYR 905
            PSKVYFLGPELET NY+VKH+SAYASDFLRVTF DEDRCKLP +AIS RIGKDIFSK YR
Sbjct: 261  PSKVYFLGPELETSNYVVKHFSAYASDFLRVTFVDEDRCKLPSQAISTRIGKDIFSKPYR 320

Query: 906  TGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDE 1085
            TGIYNR+L+VLRDGISIGSKKFEFLAFSASQLRD+S WMFASND VTA+ IREWMGQF+E
Sbjct: 321  TGIYNRILSVLRDGISIGSKKFEFLAFSASQLRDSSIWMFASNDFVTASSIREWMGQFNE 380

Query: 1086 IYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQ 1265
            IYSVSKCAARMGQLFSSSTPTFNVPS +V+VIPDIET TDG+KYCFSDGIGKIS+PFA+Q
Sbjct: 381  IYSVSKCAARMGQLFSSSTPTFNVPSREVKVIPDIETNTDGVKYCFSDGIGKISVPFAKQ 440

Query: 1266 VAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQ 1445
            VAKK GLS+TPSAFQIRYGGYKGVI +DRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQ
Sbjct: 441  VAKKLGLSNTPSAFQIRYGGYKGVITIDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQ 500

Query: 1446 PCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIKTAVK 1625
            PC+LNREIV LLSTLGVDD IFE+LQHDQ RLLD+MLT +EAAL VL RM+GS IKTA+K
Sbjct: 501  PCYLNREIVILLSTLGVDDEIFELLQHDQMRLLDNMLTSKEAALRVLGRMKGSAIKTALK 560

Query: 1626 MLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYV 1805
            ML HGY PDSEPYLL LLKAYREYQLSDIRSRCR+FVP+ RVLIGCLDELGTL+YGQV++
Sbjct: 561  MLMHGYAPDSEPYLLALLKAYREYQLSDIRSRCRIFVPRARVLIGCLDELGTLEYGQVFL 620

Query: 1806 RVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            +V+M +EEL+NP+Q FF+K+D+STA        TKNPCLHPGDIRV+E
Sbjct: 621  KVSMTDEELQNPDQAFFTKVDRSTAVVVGKVVITKNPCLHPGDIRVVE 668


>ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
            guineensis]
          Length = 1117

 Score =  869 bits (2245), Expect = 0.0
 Identities = 429/648 (66%), Positives = 515/648 (79%), Gaps = 1/648 (0%)
 Frame = +3

Query: 9    LLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTR 188
            L +F+EDGG  YKLEV F D++ +F C +     ++A+L QL YAPKI+ R  GP+++++
Sbjct: 137  LELFLEDGGVRYKLEVTFGDILATFGCRLAG-RGTDAILWQLHYAPKIYKRISGPTVSSK 195

Query: 189  FNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGN 368
            F++ RYH CK+D +FLWVR PDFS+ S IGRSC+LCLEL  GLS S+I K LPF GELG 
Sbjct: 196  FSNDRYHACKEDFQFLWVRAPDFSSNSSIGRSCYLCLELVEGLSGSEIQKKLPFLGELGE 255

Query: 369  LILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGL 548
            L L  G+  Y+ SKL PII+CP + +V YE+LFQLNSLVHMQKIS   +N+DLF +L GL
Sbjct: 256  LALLMGQLYYAPSKLVPIISCPPEHSVAYEILFQLNSLVHMQKISCGQVNNDLFDILRGL 315

Query: 549  SVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNLSSN-KNGPQENLMSCRRVLVT 725
            S+DT  +IL KMHKL STCY P+ FI + L+  RK +N SS  K+ P EN+MSC RVLVT
Sbjct: 316  SLDTTMKILTKMHKLKSTCYEPVQFIKNQLASMRKNRNASSPIKSTPAENIMSCHRVLVT 375

Query: 726  PSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYR 905
            PSKVYFLGPELET NY+++HYS YASDF+RV+F +ED  KL  +AIS  I + +FSK YR
Sbjct: 376  PSKVYFLGPELETSNYVIRHYSEYASDFIRVSFVEEDWGKLSFDAISTSIEQGVFSKPYR 435

Query: 906  TGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDE 1085
            TGIYNR+L++L+DGI IGSKKFEFL FSASQLR NS WMFASND VTA  IREWMG F++
Sbjct: 436  TGIYNRILSILKDGIVIGSKKFEFLVFSASQLRSNSIWMFASNDKVTAESIREWMGHFNK 495

Query: 1086 IYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQ 1265
            I+SVSKCAARMGQLFSSS  T +VP  DV+ I DI   TDG+ YCFSDGIGKISL FARQ
Sbjct: 496  IHSVSKCAARMGQLFSSSLQTIDVPFRDVKKISDITVTTDGIPYCFSDGIGKISLSFARQ 555

Query: 1266 VAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQ 1445
            VA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSMLKF+S NTML VTK SE  
Sbjct: 556  VAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFESENTMLCVTKWSEYL 615

Query: 1446 PCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIKTAVK 1625
            PC+LNREI+ LLSTLGV+D +FE++QHDQ  LLD+MLT RE  L +L +M     +T VK
Sbjct: 616  PCYLNREIICLLSTLGVEDEVFELMQHDQMSLLDEMLTNREITLRMLDKMAFPDARTVVK 675

Query: 1626 MLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYV 1805
            ML  GY P+SEPYLLM+LKAYREYQLSDIRS+CR+FVPKGRVL+GCLDE G+LDYGQVYV
Sbjct: 676  MLMQGYEPNSEPYLLMMLKAYREYQLSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQVYV 735

Query: 1806 RVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            ++TM +EEL++ NQ FF K+DQ+ A        T+NPCLHPGD+RVL+
Sbjct: 736  KITMTKEELQDTNQTFFDKVDQTAAAVIQKVVVTRNPCLHPGDVRVLQ 783


>ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Phoenix
            dactylifera]
          Length = 1117

 Score =  855 bits (2209), Expect = 0.0
 Identities = 422/646 (65%), Positives = 509/646 (78%), Gaps = 1/646 (0%)
 Frame = +3

Query: 15   IFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFN 194
            IF+EDGG  YKLE+ F D++ +F C +     ++A+LLQL YAPKI+ R  G +++++F+
Sbjct: 139  IFMEDGGVRYKLEITFGDILATFGCRLAG-RGTDAILLQLHYAPKIYKRISGRTISSKFS 197

Query: 195  SARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLI 374
            + RYH CK+D +FLWVR  DFS+ S IGRSC+LCLEL  GL  S+I K LPF GELG L 
Sbjct: 198  NDRYHACKEDFRFLWVRATDFSSNSSIGRSCYLCLELVEGLPGSEIQKKLPFAGELGELA 257

Query: 375  LKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSV 554
            L  GE  Y+ SKL PII+CP + +V YE+LFQLNSLVH+QKIS   +N+DLF +L GLS+
Sbjct: 258  LSMGELFYAPSKLVPIISCPPEHSVAYEILFQLNSLVHVQKISCGQVNNDLFDILRGLSL 317

Query: 555  DTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNLSSN-KNGPQENLMSCRRVLVTPS 731
            DT  +IL +MHKLNSTCY P+ FI + L+  RK +N SS  ++   EN+M C RVLVTPS
Sbjct: 318  DTTMKILTRMHKLNSTCYEPMQFIKNQLANMRKNRNASSPIQSAHAENIMGCHRVLVTPS 377

Query: 732  KVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRTG 911
            KVYF GPELET NY+VKHYS YASDF+RV+F +ED  KL  +AIS  I + +FSK YRTG
Sbjct: 378  KVYFFGPELETSNYVVKHYSEYASDFIRVSFVEEDWGKLSSDAISPSIEQGLFSKPYRTG 437

Query: 912  IYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIY 1091
            IYNR+L++LRDGI IGSKKFEFLAFSASQLR NS WMFASND VTA  IREWMG F++I+
Sbjct: 438  IYNRILSILRDGIVIGSKKFEFLAFSASQLRSNSVWMFASNDKVTAEGIREWMGHFNKIH 497

Query: 1092 SVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVA 1271
            S+SKCAARMGQLFSSS  T +VP  DVR I DI   TDG+ YCFSDGIGKISL FARQVA
Sbjct: 498  SISKCAARMGQLFSSSLQTIDVPFRDVRTISDITVTTDGIPYCFSDGIGKISLSFARQVA 557

Query: 1272 KKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPC 1451
            +KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSMLKF+S NTML VTK SE  PC
Sbjct: 558  QKCGLSHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFESENTMLCVTKWSEYLPC 617

Query: 1452 FLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIKTAVKML 1631
            +LNREI+ LLSTLG++D +FE +QHDQ  LLD+MLT RE AL +L +M     +T VKML
Sbjct: 618  YLNREIICLLSTLGIEDEVFESMQHDQMSLLDEMLTNREIALRMLDKMAFPDTRTTVKML 677

Query: 1632 THGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRV 1811
              GY P+SEPYLLM+LKAYREYQLSDIRS+CR+FVPKGRVL+GCLDE G+LDYGQ+YV+V
Sbjct: 678  MQGYEPNSEPYLLMMLKAYREYQLSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQIYVKV 737

Query: 1812 TMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            TM +EEL++  +  F K+DQ+ A        T+NPCLHPGD+R+L+
Sbjct: 738  TMTKEELQHTYETCFDKVDQTAAVVVQKVVVTRNPCLHPGDVRILQ 783


>ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 1125

 Score =  838 bits (2165), Expect = 0.0
 Identities = 415/652 (63%), Positives = 506/652 (77%), Gaps = 3/652 (0%)
 Frame = +3

Query: 3    KMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLN 182
            K L +FVEDGGE YKLE++F D+  S+ C +   + S+ +LLQLKYAP+I+ R      +
Sbjct: 136  KKLELFVEDGGEYYKLEIMFGDINASYGCLLSKGD-SDGILLQLKYAPRIYRRIFDQKSS 194

Query: 183  TRFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGEL 362
            ++FN  RY   K+DVKF+WVR PDFS  S IG+S   CL+L   L  S +LK+LPF GEL
Sbjct: 195  SKFNGDRYRAFKEDVKFIWVRAPDFSVNSSIGKSTCFCLKLKERLLGSDVLKSLPFSGEL 254

Query: 363  GNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLS 542
            G +IL+ G    SS+KL P+++CP D +V YE+LFQLNSLVH QK+ +  +NSDLF +L 
Sbjct: 255  GEVILRTGNVSTSSTKLVPLVDCPSDNSVAYEILFQLNSLVHNQKLPAKKVNSDLFNLLG 314

Query: 543  GLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFR---KQQNLSSNKNGPQENLMSCRR 713
             L  D   RIL+KMHKL S CY P+ F+   ++ FR   KQ  LSS+K+   E+LM C R
Sbjct: 315  ELPFDISMRILLKMHKLKSICYEPMQFVRQQVANFRRNRKQNALSSSKSTHSESLMKCYR 374

Query: 714  VLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFS 893
            VL+TPSKVY LGPE ET NY+VKHYSAYASDF+RV+F DED  KL  + IS RI + +FS
Sbjct: 375  VLITPSKVYCLGPEAETSNYVVKHYSAYASDFVRVSFVDEDWSKLSPDTISARIERGLFS 434

Query: 894  KHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMG 1073
            K ++TGI++R+L++LRDG SIG KKFEFLAFSASQLR NS WMFASND VTA  IREWMG
Sbjct: 435  KPFKTGIHDRILSILRDGFSIGLKKFEFLAFSASQLRSNSVWMFASNDDVTAEGIREWMG 494

Query: 1074 QFDEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLP 1253
            QF++I+SVSKCAARMGQLFSSS  T NVPS +V+ IPDI+  TDG KY FSDGIGKISL 
Sbjct: 495  QFNQIHSVSKCAARMGQLFSSSLQTLNVPSWEVKTIPDIDVTTDGNKYTFSDGIGKISLS 554

Query: 1254 FARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKC 1433
            FARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSM KF+SN+TMLN+TK 
Sbjct: 555  FARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFNKLSLRPSMKKFESNSTMLNITKW 614

Query: 1434 SESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIK 1613
            S  QPCFLNREI+ LLSTLG++D +FE +QH+    LD MLT  E AL VL +M G+  +
Sbjct: 615  SNYQPCFLNREIICLLSTLGIEDEVFESMQHEHMHFLDGMLTNSEVALIVLGQMAGAETR 674

Query: 1614 TAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYG 1793
            TAVKMLTHGY P SEPYL M+L+A+REYQLSD+RS+CR+FVPKGRVL+GCLDE+G L+YG
Sbjct: 675  TAVKMLTHGYEPTSEPYLSMMLQAHREYQLSDLRSKCRIFVPKGRVLVGCLDEIGLLEYG 734

Query: 1794 QVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            QVYVR+T+ +EEL++ +Q FF K+D++TA        TKNPCLHPGDIRVLE
Sbjct: 735  QVYVRITLTKEELKDADQTFFHKVDETTAVIVGKVVVTKNPCLHPGDIRVLE 786


>gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 947

 Score =  800 bits (2065), Expect = 0.0
 Identities = 395/612 (64%), Positives = 477/612 (77%), Gaps = 3/612 (0%)
 Frame = +3

Query: 123  LLQLKYAPKIHHRFCGPSLNTRFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLE 302
            + QLKYAP+I+ R       ++FN  RY   K+DVKF+WVR PDFS  S IG+S   CL+
Sbjct: 1    MFQLKYAPRIYRRIFDQKNGSKFNGDRYRAFKEDVKFIWVRAPDFSVNSSIGKSTCFCLK 60

Query: 303  LANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSL 482
            L   L  S +LK+LPF GELG +IL+ G    SS+KL P+++CP D +V YE+LFQLNSL
Sbjct: 61   LKERLLGSDVLKSLPFSGELGEVILRTGNVSTSSTKLVPLVDCPSDNSVAYEILFQLNSL 120

Query: 483  VHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFR---K 653
            VH QK+ +  +NSDLF +L  L  D   RIL+KMHKL S CY P+ F+   ++ FR   K
Sbjct: 121  VHNQKLPAKKVNSDLFNLLGELPFDISMRILLKMHKLKSICYEPMQFVRQQVANFRRNRK 180

Query: 654  QQNLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADE 833
            Q  LSS+K+   E+LM C RVL+TPSKVY LGPE ET NY+VKHYSAYASDF+RV+F DE
Sbjct: 181  QNALSSSKSTHSESLMKCYRVLITPSKVYCLGPEAETSNYVVKHYSAYASDFVRVSFVDE 240

Query: 834  DRCKLPVEAISMRIGKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNS 1013
            D  KL  + IS RI + +FSK ++TGI++R+L++LRDG SIG KKFEFLAFSASQLR NS
Sbjct: 241  DWSKLSPDTISARIERGLFSKPFKTGIHDRILSILRDGFSIGLKKFEFLAFSASQLRSNS 300

Query: 1014 AWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIE 1193
             WMFASND VTA  IREWMGQF++I+SVSKCAARMGQLFSSS  T NVPS +V+ IPDI+
Sbjct: 301  VWMFASNDDVTAEGIREWMGQFNQIHSVSKCAARMGQLFSSSLQTLNVPSWEVKTIPDID 360

Query: 1194 TVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLS 1373
              TDG KY FSDGIGKISL FARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLS
Sbjct: 361  VTTDGNKYTFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFNKLS 420

Query: 1374 LRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDM 1553
            LRPSM KF+SN+TMLN+TK S  QPCFLNREI+ LLSTLG++D +FE +QH+    LD M
Sbjct: 421  LRPSMKKFESNSTMLNITKWSNYQPCFLNREIICLLSTLGIEDEVFESMQHEHMHFLDGM 480

Query: 1554 LTKREAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVF 1733
            LT  E AL VL +M G+  +TAVKMLTHGY P SEPYL M+L+A+REYQLSD+RS+CR+F
Sbjct: 481  LTNSEVALIVLGQMAGAETRTAVKMLTHGYEPTSEPYLSMMLQAHREYQLSDLRSKCRIF 540

Query: 1734 VPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKN 1913
            VPKGRVL+GCLDE+G L+YGQVYVR+T+ +EEL++ +Q FF K+D++TA        TKN
Sbjct: 541  VPKGRVLVGCLDEIGLLEYGQVYVRITLTKEELKDADQTFFHKVDETTAVIVGKVVVTKN 600

Query: 1914 PCLHPGDIRVLE 1949
            PCLHPGDIRVLE
Sbjct: 601  PCLHPGDIRVLE 612


>ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1106

 Score =  801 bits (2069), Expect = 0.0
 Identities = 402/650 (61%), Positives = 495/650 (76%), Gaps = 1/650 (0%)
 Frame = +3

Query: 3    KMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLN 182
            K L +FVE  GE YKLEV+F D++ S  C + +  ESNA+LLQLKY+P+ + R  GP + 
Sbjct: 135  KKLELFVEQSGEKYKLEVMFGDIIASCGCCL-DGSESNAILLQLKYSPRSYVRIHGPMVK 193

Query: 183  TRFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGEL 362
            ++ ++ RY  C++D +F W RT DFS  + IG+SC  CL+LA GLS  +IL+ LPF   L
Sbjct: 194  SKLSNDRYRACREDFQFPWFRTSDFSPDNTIGKSCCYCLQLAAGLSCPEILRDLPFSTVL 253

Query: 363  GNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLS 542
             +L L +GE    S  L PI+NCP D +V +E+L+Q+NSLVHMQKI+   + +DLF +  
Sbjct: 254  EDLNLFKGELWSPSWMLVPIVNCPSDYSVAFEILYQINSLVHMQKITFRQVTTDLFDIFK 313

Query: 543  GLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNLSSNKNGPQENLMSCRRVLV 722
            GL +D+  +ILMKMHKL STCY P+ FI + L++ +     SSNK+   +NLMSC RVLV
Sbjct: 314  GLPLDSAIKILMKMHKLTSTCYNPVQFIKNQLAKIKNFHAPSSNKSTIAQNLMSCYRVLV 373

Query: 723  TPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHY 902
            TP+KVY LGPELET NY+VKH+S  ASDFLRV+F DED  KLP +AIS+ I ++  SK +
Sbjct: 374  TPTKVYCLGPELETSNYVVKHFSTNASDFLRVSFVDEDWSKLPSDAISVTIDRNFLSKPH 433

Query: 903  RTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFD 1082
            RTGIY R+L+VL+DG+ IGSKKFEFLAFSASQLR NS WMFASN+++TA  IR+WMG F 
Sbjct: 434  RTGIYTRILSVLKDGLHIGSKKFEFLAFSASQLRANSVWMFASNENLTAESIRKWMGHFS 493

Query: 1083 EIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVT-DGMKYCFSDGIGKISLPFA 1259
             I+SVSKCAARMGQLFSSS  T NVP  DV++IPDIE  T DG KYCFSDGIGKISL FA
Sbjct: 494  GIHSVSKCAARMGQLFSSSVQTLNVPRQDVKIIPDIEVTTEDGKKYCFSDGIGKISLSFA 553

Query: 1260 RQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSE 1439
            +Q+AKKCGL +TPSAFQIRYGGYKGVIA+DRTSF KLSLR SMLKF+S NTML+VTK SE
Sbjct: 554  KQIAKKCGLRNTPSAFQIRYGGYKGVIAIDRTSFWKLSLRKSMLKFESTNTMLSVTKWSE 613

Query: 1440 SQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIKTA 1619
              PCFLNREI+ LLSTLG+ D IFE +QHDQ + L  MLT +E AL VL RM GS ++TA
Sbjct: 614  YLPCFLNREIICLLSTLGIKDEIFESMQHDQMQQLGKMLTDKEVALRVLDRMTGSEVRTA 673

Query: 1620 VKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQV 1799
            +KML  GY P+SEPYL M+LKA R+YQLSD RS+CR+FVPKGRVLIGCLDE   LDYGQ 
Sbjct: 674  IKMLMQGYDPNSEPYLSMMLKASRDYQLSDTRSKCRIFVPKGRVLIGCLDETCNLDYGQA 733

Query: 1800 YVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            Y++VTM +EEL+N +Q F    DQ++A        T+NPCLHPGDIRVL+
Sbjct: 734  YIKVTMTKEELQNEDQTFLRNTDQTSAVVVGKVVVTRNPCLHPGDIRVLQ 783


>gb|PKA52670.1| putative RNA-dependent RNA polymerase 2 [Apostasia shenzhenica]
          Length = 1120

 Score =  778 bits (2009), Expect = 0.0
 Identities = 396/656 (60%), Positives = 486/656 (74%), Gaps = 7/656 (1%)
 Frame = +3

Query: 3    KMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLN 182
            K + +F+EDGGE YKLEV+F DV++S  C +G  E+ NA+LLQLK+ P+I+HR  GP+L 
Sbjct: 135  KKMEVFLEDGGECYKLEVMFEDVMSSHGCRLGGGEQLNAILLQLKFGPRIYHRVSGPNLK 194

Query: 183  TRFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGEL 362
            ++F S R+H C+++ +FLWVRT DFS+T  +G   + CLEL   +  S ILK+LPF  E+
Sbjct: 195  SKFASDRFHICREEFQFLWVRTTDFSSTKAVGMCFYFCLELGKRVPVSDILKSLPFPCEM 254

Query: 363  GNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLS 542
            G+LI ++ E   S  +L PII+CP    +PYE+LFQLNSLVH QKIS      +LF  L 
Sbjct: 255  GDLIPRKREPFCSLLELVPIISCP---ELPYEILFQLNSLVHTQKISILQA-FNLFDFLK 310

Query: 543  GLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFR-KQQNLSSNKNGPQENLMSCRRVL 719
                DTV  I+MKMHKL STC  P+ FI   L   R  +++++ NK    E+L  C R L
Sbjct: 311  KEDCDTVLNIIMKMHKLKSTCSNPVQFIDRELQCMRTSKKSMTVNKRSLPEHLNYCHRAL 370

Query: 720  VTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKH 899
            VTP+KVYFLGPELE  NY++KH+SAYASDFLRV+F DED  KL  +AIS RI     S+ 
Sbjct: 371  VTPAKVYFLGPELENSNYVIKHFSAYASDFLRVSFVDEDWGKLSSDAISTRIELGFVSEL 430

Query: 900  YRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQF 1079
            Y+T IYNRML+VLRDGI+IGSK+FEFLAFSASQLR NS WMFASN  V+A  IR+WMG F
Sbjct: 431  YKTKIYNRMLSVLRDGIAIGSKQFEFLAFSASQLRGNSCWMFASNGDVSAETIRKWMGDF 490

Query: 1080 DEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTD------GMKYCFSDGIGK 1241
            ++I SVSKCAARMGQ FSSS P   V S +V +I DI + +D      G+KYCFSDGIGK
Sbjct: 491  NKIRSVSKCAARMGQQFSSSFPAMPVQSKEVDIIEDIYSFSDSNSDANGVKYCFSDGIGK 550

Query: 1242 ISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLN 1421
            ISL FA Q++++CGL  TPSAFQIRYGGYKGVIAVD+TSFCKLSLRPSMLKF SNNTMLN
Sbjct: 551  ISLSFAEQISRRCGLDKTPSAFQIRYGGYKGVIAVDQTSFCKLSLRPSMLKFDSNNTMLN 610

Query: 1422 VTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRG 1601
            +T  S+  PC+LNREI+ LLSTLG+DD +FE +Q DQ  +LDDML  +  ALTV+ ++ G
Sbjct: 611  ITSYSKYLPCYLNREIICLLSTLGIDDAVFEAMQQDQMSILDDMLKNKAVALTVIGKISG 670

Query: 1602 SGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGT 1781
                 A  +L HGY P+SEPYL MLLKAYR YQLSDIRSRCR+FVPKGR+L+GCLDE GT
Sbjct: 671  PEKGKAESLLMHGYEPNSEPYLSMLLKAYRAYQLSDIRSRCRIFVPKGRILLGCLDESGT 730

Query: 1782 LDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            LDYGQV++R+T+ +EEL N NQ FF + D STA        TKNPCLHPGDIRVLE
Sbjct: 731  LDYGQVFLRITLTKEELGNMNQVFFKEADHSTAVITGKVMVTKNPCLHPGDIRVLE 786


>gb|OVA03721.1| RNA recognition motif domain [Macleaya cordata]
          Length = 1117

 Score =  775 bits (2002), Expect = 0.0
 Identities = 398/655 (60%), Positives = 481/655 (73%), Gaps = 6/655 (0%)
 Frame = +3

Query: 3    KMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLN 182
            K +  +V + GETYKL + F D+V+S  C + N EESNAVLL+LKYAPKI  +  GPSL 
Sbjct: 136  KRIEFWVVESGETYKLVIQFGDIVSSSGCCL-NGEESNAVLLKLKYAPKICQKISGPSLA 194

Query: 183  TRFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFF-GE 359
            + F+  RY  CK++ +FLWVRT DFS    IG+S  LC +L  G   S IL   P + GE
Sbjct: 195  SNFSPDRYSICKENFEFLWVRTTDFSVLKSIGQSSSLCWQLQKGTLASDILNNFPRYEGE 254

Query: 360  LGNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVL 539
            LG+  L+  E+    S+L P++ CP+D  + YE+LF LNSLVH QKIS   +N+D+ ++L
Sbjct: 255  LGDFTLEHDERSCFGSELVPLVRCPLDSKLSYEILFLLNSLVHAQKISLTAVNTDVIEIL 314

Query: 540  SGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFR---KQQNLSSNKNGPQENLMSCR 710
            S LS+DT T+IL K+ K+ STCY  +  +   L   R   K Q  SS     + NLMSC 
Sbjct: 315  SSLSMDTATKILQKLRKVKSTCYEVMSLVQSQLHSLRGDQKHQPSSSQSRLTERNLMSCH 374

Query: 711  RVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIF 890
            RVLVTPSKVYFLGPE+ET NY+VKH++AYASDF+RV F +ED  KLP +AI+  I + IF
Sbjct: 375  RVLVTPSKVYFLGPEVETSNYVVKHFAAYASDFMRVNFVEEDWSKLPSDAITTSIEQGIF 434

Query: 891  SKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWM 1070
             K YRT IY+R+L+VLRDGI IG+K+FEFLAFSASQLR NS WMFASND V + D+REWM
Sbjct: 435  CKPYRTSIYHRILSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASNDKVRSEDVREWM 494

Query: 1071 GQFDEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISL 1250
            G F++I SVSKCAARMGQLFSSS  T  VP+ DV +IPD+E  TDG+KYCFSDGIGKISL
Sbjct: 495  GCFNKIRSVSKCAARMGQLFSSSLQTLTVPAQDVEIIPDVEVNTDGIKYCFSDGIGKISL 554

Query: 1251 PFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTK 1430
             FA+QVA+KCGL+H PSAFQIRYGGYKGVIA+DR SF KLSLRPSMLKF S N MLN+T 
Sbjct: 555  SFAKQVAQKCGLNHIPSAFQIRYGGYKGVIALDRNSFRKLSLRPSMLKFDSKNRMLNITS 614

Query: 1431 CSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGI 1610
             SES PC+LNREIV+LLSTLG+DD  F  +Q +Q   LD MLT REAAL VL  M G  I
Sbjct: 615  WSESMPCYLNREIVSLLSTLGIDDEKFMAMQQEQIHRLDKMLTSREAALNVLEGMNGGDI 674

Query: 1611 KT-AVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLD 1787
            K+  VKML  GY P SEPYLLM+L+A+REYQLSDIRS+CR+FV K RVL+GCLDE  TL+
Sbjct: 675  KSILVKMLLQGYEPSSEPYLLMMLRAHREYQLSDIRSKCRIFVSKARVLMGCLDETATLN 734

Query: 1788 YGQVYVRVTMNEEELR-NPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            YGQV++RVTM   EL+    Q FF K+D  T+        TKNPCLHPGDIRVLE
Sbjct: 735  YGQVFIRVTMTRAELQCGDAQTFFQKVDDKTSIVVGKVVVTKNPCLHPGDIRVLE 789


>gb|AIO05709.1| RNA-dependent RNA polymerase 2, partial [Cocos nucifera]
          Length = 618

 Score =  744 bits (1921), Expect = 0.0
 Identities = 369/543 (67%), Positives = 437/543 (80%), Gaps = 1/543 (0%)
 Frame = +3

Query: 324  SKILKTLPFFGELGNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKIS 503
            S+I K +PF GELG L L  G+  Y+ SKL PII+CP + +V YE+LFQLNSLVHMQKIS
Sbjct: 2    SEIQKKIPFLGELGELALSMGQLFYAPSKLVPIISCPPEHSVAYEILFQLNSLVHMQKIS 61

Query: 504  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNLSSN-KN 680
               +N+DLF +L GLS+DT  +IL KMHKL STCY P+ FI + L+  RK +N SS  K+
Sbjct: 62   CGQVNNDLFDILRGLSLDTTMKILAKMHKLKSTCYEPVQFIKNQLANMRKNRNSSSPIKS 121

Query: 681  GPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEA 860
               EN+MSC RVLVTPSKVYFLGPELET NY++KHYS YASDF+RV+F +ED  KL  +A
Sbjct: 122  THAENIMSCHRVLVTPSKVYFLGPELETSNYVIKHYSEYASDFIRVSFIEEDWGKLSFDA 181

Query: 861  ISMRIGKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDS 1040
            IS  I + +FSK YRTGIY+R+L++L+DGI IGSKKFEFLAFSASQLR NS WMFASND 
Sbjct: 182  ISTSIEQGVFSKPYRTGIYDRILSILKDGIVIGSKKFEFLAFSASQLRSNSIWMFASNDK 241

Query: 1041 VTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYC 1220
            VTA +IREWMG F+ I+SVSKCAARMGQLFSSS  T +VP  DV+ I D+   TDG+ YC
Sbjct: 242  VTAENIREWMGHFNRIHSVSKCAARMGQLFSSSLQTIDVPFRDVKNISDVTVTTDGIPYC 301

Query: 1221 FSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFK 1400
            FSDGIGKISL FARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSMLKF+
Sbjct: 302  FSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFE 361

Query: 1401 SNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALT 1580
            S NTML VTK SE  PC+LNREI+ LLSTLGV+D +FE++QHDQ  LLD+MLT RE AL 
Sbjct: 362  SENTMLCVTKWSEYLPCYLNREIICLLSTLGVEDEVFELMQHDQMSLLDEMLTNREIALR 421

Query: 1581 VLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIG 1760
            +L +M     +T VKML  GY P+SEPYLLM+LKAY+EYQLSDIRS+CR+FVPKGRVL+G
Sbjct: 422  MLDKMAFPDTRTIVKMLMQGYEPNSEPYLLMMLKAYQEYQLSDIRSKCRIFVPKGRVLLG 481

Query: 1761 CLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIR 1940
            CLDE  +LDYGQVYV++TM +EEL++ NQ FF K+DQ+ A        T+NPCLHPGD+R
Sbjct: 482  CLDETDSLDYGQVYVKITMTKEELQDTNQTFFDKVDQTAAVVVQKVVVTRNPCLHPGDVR 541

Query: 1941 VLE 1949
            VL+
Sbjct: 542  VLQ 544


>gb|PON93354.1| RNA-dependent RNA polymerase-type [Trema orientalis]
          Length = 1123

 Score =  751 bits (1938), Expect = 0.0
 Identities = 382/644 (59%), Positives = 470/644 (72%), Gaps = 4/644 (0%)
 Frame = +3

Query: 30   GGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFNSARYH 209
            G E YKLE+ F D++ +    +G AE   A+LL+LKY PK++ R  GP + +RF + RYH
Sbjct: 152  GEECYKLEIRFEDILETTGYCLG-AENLFAILLKLKYGPKVYKRISGPGIASRFIADRYH 210

Query: 210  FCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQG 386
             CK+D +FLWVRT DFS    IG S  +C E+   +  S   K  P + E L  LIL++G
Sbjct: 211  ICKEDAEFLWVRTTDFSELKSIGHSTTICWEMKEEVLASDTFKCFPCYRESLVELILEEG 270

Query: 387  EQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVT 566
             +  S S+  PII CP + ++ YE LFQLNSLVH QKIS A ++S+L ++ S LS +T  
Sbjct: 271  AEYCSVSETVPIIKCPSNSSLGYETLFQLNSLVHTQKISFAAVDSNLIELFSSLSDETSN 330

Query: 567  RILMKMHKLNSTCYRPLYFIHDNLSRFRK--QQNLSSNKNGPQENLMSCRRVLVTPSKVY 740
             +L K+HKL STCY P+ F+  N     K  + + S+NK     N+MSC R L+TP K++
Sbjct: 331  AVLKKLHKLKSTCYDPMSFVKINAHILEKIPESSPSANKRLTDHNVMSCHRALITPLKIF 390

Query: 741  FLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRTGIYN 920
             LGPELE  NY+VKH++ YA+DF+RVTF +ED  KLP  A+S  I + +F+K YRT IY+
Sbjct: 391  CLGPELEKSNYVVKHFATYANDFMRVTFVEEDWSKLPANAVSTSIEQGMFAKPYRTAIYD 450

Query: 921  RMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVS 1100
            R+L++LRDGI IGSK++EFLAFSASQLR NS WMFASN++V A DIREWMG F +I S+S
Sbjct: 451  RVLSILRDGIVIGSKRYEFLAFSASQLRSNSVWMFASNENVKAEDIREWMGCFSKIRSIS 510

Query: 1101 KCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKC 1280
            KCAARMGQLFSSST T  VP  DV +IPD+E   DG+ YCFSDGIGKISLPFARQVA+KC
Sbjct: 511  KCAARMGQLFSSSTQTLTVPVQDVEIIPDVEVTRDGIDYCFSDGIGKISLPFARQVAQKC 570

Query: 1281 GLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLN 1460
            GLSHTPSAFQIRYGGYKGVIAVDR S+ KLSLR SMLKF+S N MLNVTK S++ PCFLN
Sbjct: 571  GLSHTPSAFQIRYGGYKGVIAVDRNSYRKLSLRSSMLKFESKNRMLNVTKWSDAMPCFLN 630

Query: 1461 REIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGS-GIKTAVKMLTH 1637
            REIVTLLSTLGV D +F  LQ +Q RLL  M T REAAL VL ++ GS      VKML  
Sbjct: 631  REIVTLLSTLGVKDEVFLALQQEQLRLLGKMRTDREAALNVLEKLNGSDSSNILVKMLLQ 690

Query: 1638 GYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTM 1817
            GY P+ EPYL M+L++Y E QLSD++SRCRVFVPKGRVLIGCLDE GTLDYGQ++VR++M
Sbjct: 691  GYEPNMEPYLSMMLQSYYENQLSDLKSRCRVFVPKGRVLIGCLDETGTLDYGQIFVRISM 750

Query: 1818 NEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
             + EL   NQ+FF K+D  T+        TKNPCLHPGDIRVLE
Sbjct: 751  TKAELETGNQDFFRKVDDKTSIVLGKLVVTKNPCLHPGDIRVLE 794


>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score =  748 bits (1932), Expect = 0.0
 Identities = 388/654 (59%), Positives = 487/654 (74%), Gaps = 5/654 (0%)
 Frame = +3

Query: 3    KMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLN 182
            K +  FV  G E YKLE+ F+DV  +   +     +SNA+LL+L+YAPKI+ +  G ++ 
Sbjct: 136  KRVEFFVFKGKECYKLEINFSDVFTA-SGYRLRGRQSNALLLRLRYAPKIYQKISGSTVA 194

Query: 183  TRFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE- 359
            ++F++ RYH CK+DV+FLWVRT DFS ++ IG S   C EL  GL +S IL++ P++ E 
Sbjct: 195  SKFSTDRYHICKEDVEFLWVRTTDFSESNSIGWSSSFCWELEEGLLSSDILRSFPYYKEE 254

Query: 360  LGNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSD-LFKV 536
            LG+LI+++ EQ    S+L P+IN  +D T+ YE+L+QLNSLVH QK+S   + SD L ++
Sbjct: 255  LGDLIVEKEEQFCCESELVPLINSGLDSTLAYEILYQLNSLVHTQKVSLRAVKSDDLIEI 314

Query: 537  LSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQN--LSSNKNGPQE-NLMSC 707
            L  LSVDT    L+++HK+ STCY PL  I   LS   + Q   LSS++ G +E NLMSC
Sbjct: 315  LCCLSVDTANGFLLQLHKMKSTCYDPLPIIQRQLSSLLRNQKSLLSSSQRGLREGNLMSC 374

Query: 708  RRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDI 887
             RVLVTP+K+Y LGPELE  N +V+HY+AY+SDFLRV+F +ED  KL   A+S  I + I
Sbjct: 375  HRVLVTPTKIYCLGPELEKSNCVVRHYAAYSSDFLRVSFVEEDWTKLHSGALSTSIEEGI 434

Query: 888  FSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREW 1067
            FSK YRT IY R+L++LRDGI IG+K+FEFLAFSASQLR NS WMFASN++V A +IREW
Sbjct: 435  FSKPYRTRIYYRILSILRDGIKIGAKRFEFLAFSASQLRSNSVWMFASNETVKAENIREW 494

Query: 1068 MGQFDEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKIS 1247
            MG F++I SVSKCAARMGQLFSSS     V +H V +IPD+E   DG++YCFSDGIGKIS
Sbjct: 495  MGSFNKIRSVSKCAARMGQLFSSSVEASKVQAHHVEIIPDVEITRDGIQYCFSDGIGKIS 554

Query: 1248 LPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVT 1427
              FAR+VA+KCGLS TPSAFQIRYGGYKGVIAVDR SFCKLSLRPSMLKF SN+  LNVT
Sbjct: 555  QSFAREVAQKCGLSQTPSAFQIRYGGYKGVIAVDRNSFCKLSLRPSMLKFDSNDRTLNVT 614

Query: 1428 KCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSG 1607
            K SES PC+LNREIV+LLSTLGV+D  FE+LQ  Q  LLD MLT REAAL VL    G  
Sbjct: 615  KWSESMPCYLNREIVSLLSTLGVEDEKFEMLQCKQISLLDKMLTNREAALDVLECTAGDA 674

Query: 1608 IKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLD 1787
                VKML HGY P  EPYL M+L+A+RE+QLSDIRS+CR+ VPKGRVL+GCLDE G L+
Sbjct: 675  KTVLVKMLLHGYEPGVEPYLSMILRAHREHQLSDIRSKCRILVPKGRVLLGCLDETGILN 734

Query: 1788 YGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            YGQV++RVTM + E  + +Q FF ++D++T+        TKNPCLHPGDIRVL+
Sbjct: 735  YGQVFIRVTMTKAEQCHDDQSFFHQVDETTSIVIGKVVITKNPCLHPGDIRVLD 788


>ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Ricinus
            communis]
 gb|EEF52033.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
          Length = 983

 Score =  742 bits (1915), Expect = 0.0
 Identities = 373/639 (58%), Positives = 473/639 (74%), Gaps = 5/639 (0%)
 Frame = +3

Query: 48   LEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFNSARYHFCKDDV 227
            +E+ F DV+ +  C +G  +  NA+LL+LKY  +I+ +  GP + ++F++ RYH CK+D 
Sbjct: 1    MEISFEDVLETVGCRLGG-DTLNAILLKLKYGARIYKKISGPDIASKFSADRYHMCKEDF 59

Query: 228  KFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGN-LILKQGEQLYSS 404
             F+WVRT DFS+   +G+S   C E+  GL  S I K+ P++ E    +IL+ GE+  S+
Sbjct: 60   DFIWVRTTDFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEWGSA 119

Query: 405  SKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKM 584
            S++ P++ C  D  +PYE+LFQLNSLVH QKIS A ++++L   L  L++DT T IL K+
Sbjct: 120  SEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKL 179

Query: 585  HKLNSTCYRPLYFIHDNL---SRFRKQQNLSSNKNGPQENLMSCRRVLVTPSKVYFLGPE 755
            HKL  TCY PL FI   L    R  K+   SS+KN    N+MSC R L+TPSK+Y LGPE
Sbjct: 180  HKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPE 239

Query: 756  LETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRTGIYNRMLAV 935
            LE+ NY+VK++++YASDF+RVTF +ED  KLP  AISM I + IF+K +RTGIY+R+L++
Sbjct: 240  LESSNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSI 299

Query: 936  LRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAAR 1115
            LRDGI IG+KKFEFLAFSASQLR NS WMFASND   A +IREWMG F++I+S+SKCAAR
Sbjct: 300  LRDGIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAAR 359

Query: 1116 MGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHT 1295
            MGQLFSSS  TF V   D+ +IPDIE  +DG+ YCFSDGIGKISL FARQVA+KCGL+ T
Sbjct: 360  MGQLFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRT 419

Query: 1296 PSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVT 1475
            PSAFQIRYGGYKGVIAVDR SF KLSLR SM KF+S N MLNVTK SES PC+LNREI+T
Sbjct: 420  PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIIT 479

Query: 1476 LLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIKT-AVKMLTHGYGPD 1652
            LL+TLGV D IFE LQ  Q +LL+ MLT RE+AL VL  +  +  K   +KML  GY P+
Sbjct: 480  LLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPN 539

Query: 1653 SEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEEL 1832
             EPYL M+L+AY E  L ++RSRCR+FVPKGR+LIGCLDE   LDYGQVYVR+TM + EL
Sbjct: 540  VEPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAEL 599

Query: 1833 RNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            ++ +Q  F ++D++TA        TKNPCLHPGDIRVLE
Sbjct: 600  QDADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLE 638


>emb|CDP19325.1| unnamed protein product [Coffea canephora]
          Length = 1120

 Score =  746 bits (1926), Expect = 0.0
 Identities = 382/653 (58%), Positives = 483/653 (73%), Gaps = 5/653 (0%)
 Frame = +3

Query: 6    MLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNT 185
            +L  ++  GGE YKLEV F DV+ S  C + + +  NAVLL+LK+APKI+ +F GP++  
Sbjct: 140  ILEFWLSHGGECYKLEVQFGDVLESCGCCLDD-QNPNAVLLKLKHAPKIYQKFSGPNVAA 198

Query: 186  RFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELG 365
            +F++ RYH CK+D  F+WVRT DFS+   IG S  LCLE+  GLS   +   LP+     
Sbjct: 199  KFSADRYHTCKEDFDFIWVRTTDFSSIKSIGYSSSLCLEIEEGLSGLDLFTNLPYCSRFF 258

Query: 366  -NLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLS 542
              L L++GEQ  ++S+L P++ C  D  + YE+LFQLNSLVH QK+S   +NS+L +VLS
Sbjct: 259  LELTLEEGEQFSTTSELVPLVKCCSDIKITYEILFQLNSLVHTQKLSLGAVNSELMEVLS 318

Query: 543  GLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQ-QNLSSNKNG--PQENLMSCRR 713
            GL +D    IL KMHKL + CY P+ FI+  L    +   NL S+  G     N+M+C R
Sbjct: 319  GLDMDIAMPILQKMHKLETMCYDPVSFINKRLHVMGENASNLRSSSYGRPKNNNMMTCHR 378

Query: 714  VLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFS 893
            VLVTPSKVY LGPELET NYIVK++++YASDFLRVTF +ED  KL    ++   G+ +F+
Sbjct: 379  VLVTPSKVYCLGPELETSNYIVKNFASYASDFLRVTFVEEDWGKLSPSVVNTSFGRGLFA 438

Query: 894  KHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMG 1073
            K+Y+T IY+R+L++L+DGI IG K+F FLAFSASQLR NS WMFASN+++ A DIR+WMG
Sbjct: 439  KNYKTNIYHRILSILKDGIVIGEKRFLFLAFSASQLRSNSVWMFASNENLRAEDIRDWMG 498

Query: 1074 QFDEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLP 1253
             F++I SVSKCAARMGQLFSSS  T  VP   V VIPDIE  TDG  +CFSDGIGKIS  
Sbjct: 499  CFNKIRSVSKCAARMGQLFSSSLQTLEVPPQQVEVIPDIEMTTDGENHCFSDGIGKISQG 558

Query: 1254 FARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKC 1433
            FARQVA+KCGL++TPSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTK 
Sbjct: 559  FARQVAQKCGLNYTPSAFQIRYGGYKGVIAVDRYSFRKLSLRSSMLKFESKNRMLNVTKW 618

Query: 1434 SESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIK 1613
            SE+ PC+LNREI+TLLSTLGV+D +F  +Q++Q  LLD MLT REAAL VL+ M  +  K
Sbjct: 619  SEAMPCYLNREIITLLSTLGVEDQVFLAMQYEQLHLLDKMLTHREAALDVLASMGVNETK 678

Query: 1614 T-AVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDY 1790
            +  V+ML  G+ P+ EPYL M+L+++RE QLSD+RSRCR+FVPKGRVL+GCLDE G LDY
Sbjct: 679  SIVVRMLRQGFEPEIEPYLSMILQSHRENQLSDLRSRCRIFVPKGRVLLGCLDETGILDY 738

Query: 1791 GQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            GQVY+R+TM + EL+   Q FF K+D++TA        TKNPCLHPGD+RVLE
Sbjct: 739  GQVYIRITMTKTELQIGEQCFFQKVDETTAIVKGKVVVTKNPCLHPGDVRVLE 791


>ref|XP_007211312.1| RNA-dependent RNA polymerase 2 [Prunus persica]
 gb|ONI08412.1| hypothetical protein PRUPE_5G176700 [Prunus persica]
          Length = 1118

 Score =  745 bits (1923), Expect = 0.0
 Identities = 379/643 (58%), Positives = 470/643 (73%), Gaps = 5/643 (0%)
 Frame = +3

Query: 36   ETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFNSARYHFC 215
            E YKLE+ F +++ SF C +G  E+ NA+LL+LK+ P+I  +  GP++  RF++ RYH C
Sbjct: 148  ECYKLEIAFENIMESFGCRLGG-EKVNALLLKLKFGPRIFRKISGPNVAARFSTDRYHVC 206

Query: 216  KDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFF--GELGNLILKQGE 389
            KDD  FLWVRT DFS    IG S   C E+    S S + +  P++   ++ +LIL  GE
Sbjct: 207  KDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYYKDNDVVDLILDNGE 266

Query: 390  QLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTR 569
            +  S S+  P++ C  D  +PYE+LFQLN+LVH QKIS A  +SDL + LSGLSVDT   
Sbjct: 267  KYCSPSETVPLVKCRSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNV 326

Query: 570  ILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNL--SSNKNGPQENLMSCRRVLVTPSKVYF 743
            +L K+HK  +TCY PL F+   L    +      S  K   + N+MSC RVL+TPSK+  
Sbjct: 327  LLEKLHKRKTTCYDPLSFLKMQLHVLERNHKSRPSPYKRLMEHNVMSCHRVLITPSKICC 386

Query: 744  LGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRTGIYNR 923
            LGPELE  NY+VK+++AYASDF+RVTF DED  KLP  AIS  I + IF+K +RTGIY+R
Sbjct: 387  LGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHR 446

Query: 924  MLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSK 1103
            ML++LRDGI IG K+FEFLAFSASQLR +S WMF+SND+V A DIREWMG F +I S+SK
Sbjct: 447  MLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISK 506

Query: 1104 CAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCG 1283
            CAARMGQLFSSST T  VP+ DV +IPD+ET +DG+ YCFSDGIGKISL FAR+VA+KCG
Sbjct: 507  CAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCG 566

Query: 1284 LSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNR 1463
            L  TPSAFQIRYGGYKGVIAVD  SF KLSLR SMLKF+S N MLNVTK S++ PC+LNR
Sbjct: 567  LDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNR 626

Query: 1464 EIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIK-TAVKMLTHG 1640
            EI++LLSTLGV D  FE LQ +Q RLL  M T+R AAL V  R+ G+  K T VKML HG
Sbjct: 627  EIISLLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHG 686

Query: 1641 YGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMN 1820
            Y P++EPYL M+L+AY E  LSD++SRCR+FVPKGRVL+GCLDE G LDYGQVYVR+TM 
Sbjct: 687  YEPNAEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMT 746

Query: 1821 EEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            + E    +Q FF K+D++T         TKNPCLHPGD+RVL+
Sbjct: 747  KAEQEMGDQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLD 789


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
            [Prunus mume]
          Length = 1100

 Score =  744 bits (1921), Expect = 0.0
 Identities = 379/643 (58%), Positives = 469/643 (72%), Gaps = 5/643 (0%)
 Frame = +3

Query: 36   ETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFNSARYHFC 215
            E YKLE+ F +++ SF C +G  E+ NA+LL+LK+ P+I  +  GP++  RF++ RYH C
Sbjct: 130  ECYKLEIAFENIMESFGCRLGG-EKVNALLLKLKFGPRIFRKISGPNVAARFSTDRYHVC 188

Query: 216  KDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFF--GELGNLILKQGE 389
            KDD  FLWVRT DFS    IG S   C E+    S S + +  P++   ++ +LIL  GE
Sbjct: 189  KDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSLSDVFECFPYYKDNDVVDLILDNGE 248

Query: 390  QLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTR 569
            +  S S+  P++ C  D  +PYE+LFQLN+LVH QKIS A  +SDL + LSGLSVDT   
Sbjct: 249  KYCSPSETVPLVKCGSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNV 308

Query: 570  ILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNL--SSNKNGPQENLMSCRRVLVTPSKVYF 743
            +L K+HK  +TCY P  F+   L    +      S  K   + N+MSC RVL+TPSK+  
Sbjct: 309  LLEKLHKRKTTCYDPQSFLKMQLHVLERNHKSRPSPYKRLTEHNVMSCHRVLITPSKICC 368

Query: 744  LGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRTGIYNR 923
            LGPELE  NY+VK+++AYASDF+RVTF DED  KLP  AIS  I + IF+K +RTGIY+R
Sbjct: 369  LGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHR 428

Query: 924  MLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSK 1103
            ML++LRDGI IG K FEFLAFSASQLR +S WMF+SND+V A DIREWMG F +I S+SK
Sbjct: 429  MLSILRDGIVIGEKNFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISK 488

Query: 1104 CAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCG 1283
            CAARMGQLFSSST T  VP+ DV +IPD+ET +DG+ YCFSDGIGKISL FAR+VA+KCG
Sbjct: 489  CAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCG 548

Query: 1284 LSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNR 1463
            L  TPSAFQIRYGGYKGVIAVD  SF KLSLR SMLKF+S NTMLNVTK S++ PC+LNR
Sbjct: 549  LDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNTMLNVTKWSDAMPCYLNR 608

Query: 1464 EIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIK-TAVKMLTHG 1640
            EI++L+STLGV D  FE LQ +Q RLL  M T+R AAL VL R+ G+  K T VKML HG
Sbjct: 609  EIISLMSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVLERLNGADSKNTLVKMLLHG 668

Query: 1641 YGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMN 1820
            Y P+ EPYL M+L+AY E  LSD++SRCR+FVPKGRVL+GCLDE G LDYGQVYVR+TM 
Sbjct: 669  YEPNVEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMT 728

Query: 1821 EEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            + E    +Q FF K+D++T         TKNPCLHPGD+RVL+
Sbjct: 729  KAEQEMGDQSFFQKVDETTCIVTGKVVVTKNPCLHPGDVRVLD 771


>ref|XP_019197287.1| PREDICTED: RNA-dependent RNA polymerase 2 [Ipomoea nil]
          Length = 1120

 Score =  743 bits (1919), Expect = 0.0
 Identities = 377/644 (58%), Positives = 470/644 (72%), Gaps = 5/644 (0%)
 Frame = +3

Query: 33   GETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFNSARYHF 212
            GE YKLEV F DVV +  C + + E+ +AVL +LK+APKI+ +  G  + ++F+S RYH 
Sbjct: 150  GECYKLEVQFGDVVETSRCSLDHTEDHDAVLFKLKFAPKIYRKVSGKDVASKFSSDRYHI 209

Query: 213  CKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQGE 389
            CK+D  FLWVRT DFS    +G    LC  +  GLS + IL  LP++ E   +L L++GE
Sbjct: 210  CKEDFDFLWVRTTDFSDVKSVGYLSSLCWVIEEGLSETDILSNLPYYNEETVDLFLEKGE 269

Query: 390  QLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTR 569
            +  S S L P++ CP D T+ YE+LFQLNSLVH QKIS A +++DL + LSG+  DT   
Sbjct: 270  EFSSESALVPLVKCPSDSTLAYEILFQLNSLVHTQKISLAAVDTDLIEFLSGVHFDTAMA 329

Query: 570  ILMKMHKLNSTCYRPLYFIH---DNLSRFRKQQNLSSNKNGPQENLMSCRRVLVTPSKVY 740
            +L  MHK+ STCY+P  +I    D+L R  K   LS+ K G   N+MS  R  VTPSK+Y
Sbjct: 330  VLQSMHKMQSTCYKPKSYIKNQLDDLDRNCKNIPLSTYKKGGSHNMMSVHRAYVTPSKIY 389

Query: 741  FLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRTGIYN 920
             LGPELET NYIVK+++ YASDFLRVTF +ED  KL   A+S  I + IF+K YRT IY+
Sbjct: 390  CLGPELETSNYIVKNFAPYASDFLRVTFVEEDWGKLSPNAVSTNISQGIFAKPYRTDIYS 449

Query: 921  RMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVS 1100
            R+L+VLRDG++IG+K F FLAFSASQLR NS WMFASN+ V A DIREWMG F++I +VS
Sbjct: 450  RILSVLRDGVTIGAKHFVFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRNVS 509

Query: 1101 KCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKC 1280
            KCAARMGQLFS+S  T  V   DV VIPDIE  +DG+KYCFSDGIGKIS  F+RQVA+KC
Sbjct: 510  KCAARMGQLFSTSLQTMEVQPQDVEVIPDIEMTSDGVKYCFSDGIGKISQAFSRQVAQKC 569

Query: 1281 GLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLN 1460
            GL+HTPSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLN+TK S++ PC+LN
Sbjct: 570  GLTHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESTNRMLNITKWSDAMPCYLN 629

Query: 1461 REIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGI-KTAVKMLTH 1637
            REIV LLSTLG++D +FE +Q +  RLL  MLT ++AAL VL  M G  I K  VKML  
Sbjct: 630  REIVVLLSTLGIEDKVFEEMQEEHLRLLGKMLTDKQAALDVLESMGGGEIKKVLVKMLLK 689

Query: 1638 GYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTM 1817
            GY P+ EPYL  +L+++ E QLSD++SRCR+ VPKGR+++GCLDE G LDYGQVY R+T+
Sbjct: 690  GYEPNVEPYLSTMLQSHYENQLSDLKSRCRISVPKGRIVVGCLDETGILDYGQVYARLTL 749

Query: 1818 NEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            N+ EL+   Q FF K+D +TA        TKNPCLHPGD+RVLE
Sbjct: 750  NKTELQLGEQSFFHKVDDTTAVVKGRVVVTKNPCLHPGDVRVLE 793


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
 emb|CBI15062.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1127

 Score =  742 bits (1915), Expect = 0.0
 Identities = 387/648 (59%), Positives = 470/648 (72%), Gaps = 4/648 (0%)
 Frame = +3

Query: 18   FVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFNS 197
            +V+  GE YKLEV F DV+ S  C +G  +  NA+LL+LKYAPKI  +F GP++ ++F++
Sbjct: 142  WVDKDGERYKLEVPFDDVLESSACCLGGGKV-NALLLKLKYAPKIFQKFAGPNIASKFSA 200

Query: 198  ARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLIL 377
             RYH  K+D +FLW+RT DFS+   +G+S   C E+  G     I  + P++ +L  L L
Sbjct: 201  DRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPALDIFASFPYYKDLTELTL 260

Query: 378  KQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVD 557
            +QGE   S S L P++ C     + YE+LFQLNSLVH QKIS A +++DL ++LS L VD
Sbjct: 261  EQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKISLAAVDTDLIEILSNLPVD 320

Query: 558  TVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQ-QNL--SSNKNGPQENLMSCRRVLVTP 728
            T   IL K+HK  ST Y P+ FI           +NL  SS+      N+MSC RVLVTP
Sbjct: 321  TAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKNLPPSSHSRLTNNNVMSCHRVLVTP 380

Query: 729  SKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRT 908
            SK+Y LGPELE+ NY+VKHY+AYASDF+RV+F +ED  KLP  A+SM I K  F+  +RT
Sbjct: 381  SKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADPFRT 440

Query: 909  GIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEI 1088
             IY+R+L++LR+GI IG+K+F+FLAFSASQLR NS WMFASND V  +DIREWMG F +I
Sbjct: 441  EIYHRILSILREGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKI 500

Query: 1089 YSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQV 1268
             SVSKCAARMGQLFSSS  T  VP  DV VIPDIE  +DG  YCFSDGIGKISL FA+QV
Sbjct: 501  RSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQV 560

Query: 1269 AKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQP 1448
            A+KCGL  TPSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTK SES P
Sbjct: 561  AQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTP 620

Query: 1449 CFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGIKTAV-K 1625
            C+LNREIV+LLSTLGV+D  FE L ++Q  LLD MLT R+AAL VL  M G   K  + K
Sbjct: 621  CYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAK 680

Query: 1626 MLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYV 1805
            ML  GY P+ EPYL M+L+AYRE QLSDIR+RCR+FVPK RVLIGCLDE G L+YGQVYV
Sbjct: 681  MLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYV 740

Query: 1806 RVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            RVTM + E +  NQ FF K+D +T+        TKNPCLHPGDIRVL+
Sbjct: 741  RVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLD 788


>gb|PON61085.1| RNA-dependent RNA polymerase-type [Parasponia andersonii]
          Length = 1123

 Score =  741 bits (1913), Expect = 0.0
 Identities = 376/644 (58%), Positives = 468/644 (72%), Gaps = 4/644 (0%)
 Frame = +3

Query: 30   GGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLNTRFNSARYH 209
            G E YKLE+ F D++ +    +G AE   A+LL+LKY PK++ R  GP + +RF + RYH
Sbjct: 152  GEECYKLEIRFEDILETVGYRLG-AENLFAILLKLKYGPKVYKRISGPGIASRFIADRYH 210

Query: 210  FCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQG 386
             CK+D +FLWVR+ DFS    IG S  +C E+   +  S   K  P + E L  LIL++G
Sbjct: 211  ICKEDAEFLWVRSTDFSELKSIGHSTTICWEMKEEVLASDTFKCFPCYRESLVELILEEG 270

Query: 387  EQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVT 566
             +  S S+  P+I CP + ++ YE LFQLNSLVH QK+S A ++S+L ++ S LS +T  
Sbjct: 271  VEYCSVSETVPLIKCPSNSSLGYETLFQLNSLVHTQKMSFAAVDSNLIELFSSLSDETSN 330

Query: 567  RILMKMHKLNSTCYRPLYFIHDNLSRFRK--QQNLSSNKNGPQENLMSCRRVLVTPSKVY 740
             +L K+HKL STCY P+ F+  N     K  + + S+NK     N+MSC R L+TP K++
Sbjct: 331  AVLQKLHKLKSTCYDPMSFVKINAHILEKNPKSSPSANKRLTDHNVMSCHRALITPLKIF 390

Query: 741  FLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIFSKHYRTGIYN 920
             LGPELE  NY+VKH++ YA DF+RVTF +ED  KLP  A+S  I + +F+K YRT IY+
Sbjct: 391  CLGPELEKSNYVVKHFATYADDFMRVTFVEEDWSKLPANAVSTSIEQGMFAKPYRTAIYD 450

Query: 921  RMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVS 1100
            R+L++LRDGI IGSK++EFLAFSASQLR NS WMFAS+++V A DIREWMG F +I S+S
Sbjct: 451  RVLSILRDGIVIGSKRYEFLAFSASQLRSNSVWMFASSENVKAEDIREWMGCFSKIRSIS 510

Query: 1101 KCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKC 1280
            KCAARMGQLFSSST T  VP  DV +IPD+E   DG+ YCFSDGIGKISLPFARQVA+KC
Sbjct: 511  KCAARMGQLFSSSTQTLTVPVQDVEIIPDVEVTRDGIDYCFSDGIGKISLPFARQVAQKC 570

Query: 1281 GLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLN 1460
            GLSHTPSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTK S++ PCFLN
Sbjct: 571  GLSHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCFLN 630

Query: 1461 REIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGS-GIKTAVKMLTH 1637
            REIVTLLSTLGV D +F  LQ +Q RLL  M T REAAL VL ++ GS      +KML  
Sbjct: 631  REIVTLLSTLGVKDEVFLALQQEQLRLLGKMRTDREAALNVLEKLNGSDSSNILIKMLLQ 690

Query: 1638 GYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTM 1817
            GY P+ EPYL M+L++Y E QLSD++SRCRVFVPKGRVLIGCLDE G LDYGQ++VR++M
Sbjct: 691  GYEPNMEPYLSMMLQSYYENQLSDLKSRCRVFVPKGRVLIGCLDETGILDYGQIFVRISM 750

Query: 1818 NEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
             + EL   +Q+FF K+D  T+        TKNPCLHPGDIRVLE
Sbjct: 751  TKAELETGDQDFFRKVDDKTSIVLGKVVVTKNPCLHPGDIRVLE 794


>ref|XP_021825973.1| RNA-dependent RNA polymerase 2 isoform X1 [Prunus avium]
          Length = 1118

 Score =  741 bits (1912), Expect = 0.0
 Identities = 380/654 (58%), Positives = 473/654 (72%), Gaps = 5/654 (0%)
 Frame = +3

Query: 3    KMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEESNAVLLQLKYAPKIHHRFCGPSLN 182
            K +  +V    E YKLE+ F +++ SF C +G  E+ NA+LL+LK+ P+I  +  GP++ 
Sbjct: 137  KRVEFWVWQRDECYKLEIAFENIMESFGCGLGG-EKVNALLLKLKFGPRIFRKISGPNVA 195

Query: 183  TRFNSARYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFF--G 356
             RF++ RYH CKDD  FLWVRT DFS    IG S   C E+    S S + +  P++   
Sbjct: 196  ARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYYKDN 255

Query: 357  ELGNLILKQGEQLYSSSKLAPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKV 536
            ++ +LIL  GE+  S S+  P++ C  D  +PYE+LFQLN+LVH QKIS A  +SDL + 
Sbjct: 256  DVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHSQKISLAAADSDLIEF 315

Query: 537  LSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFRKQQNL--SSNKNGPQENLMSCR 710
            LSGLSVDT   +L K+HK  +TC  PL F+   L    +      S  K   + N+MSC 
Sbjct: 316  LSGLSVDTTNVLLEKLHKRKTTCSDPLSFLKMQLHVLERNHKSRPSPYKRLMEHNVMSCH 375

Query: 711  RVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIGKDIF 890
            RVL+TPSK+  LGPELE  NY+VK+++AYASDF+RVTF DED  KLP  AIS  I + IF
Sbjct: 376  RVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIF 435

Query: 891  SKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWM 1070
            +K +RTGIY+RML++LRDGI IG K+FEFLAFSASQLR +S WMF+SND+V A DIREWM
Sbjct: 436  AKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWM 495

Query: 1071 GQFDEIYSVSKCAARMGQLFSSSTPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISL 1250
            G F +I S+SKCAARMGQLFSSST T  VP+ DV +IPD+ET +DG+ YCFSDGIGKISL
Sbjct: 496  GCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISL 555

Query: 1251 PFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTK 1430
             FAR+VA+KCGL  TPSAFQIRYGGYKGVIAVD  SF KLSLR SMLKF+S N MLNVTK
Sbjct: 556  SFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTK 615

Query: 1431 CSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKREAALTVLSRMRGSGI 1610
             S++ PC+LNREI++LLSTLGV D  FE LQ +Q RLL  M T+R AAL VL R+ G+  
Sbjct: 616  WSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVLERLNGADS 675

Query: 1611 K-TAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLD 1787
            K T VKML HGY P+ EPYL M+L+AY E  LSD++SRCR+FVPKGRVL+GCLDE G L+
Sbjct: 676  KNTLVKMLLHGYEPNVEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLN 735

Query: 1788 YGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1949
            YGQVYVR+TM + E    +Q FF K+D++T         TKNPCLHPGD+RVL+
Sbjct: 736  YGQVYVRITMTKAEQEMGDQSFFQKVDETTCIVTGKVVVTKNPCLHPGDVRVLD 789