BLASTX nr result
ID: Ophiopogon23_contig00034001
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00034001
(658 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asp... 357 e-112
ref|XP_020675735.1| probable RNA-dependent RNA polymerase 1 isof... 332 e-104
gb|PKU78010.1| RNA-dependent RNA polymerase 1 [Dendrobium catena... 332 e-104
ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isof... 332 e-103
gb|PKA52371.1| RNA-dependent RNA polymerase 1 [Apostasia shenzhe... 330 e-102
ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isof... 329 e-102
ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isof... 329 e-102
gb|ABS11001.1| RNA-dependent RNA polymerase 1, partial [Nicotian... 295 2e-98
ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isof... 311 1e-95
ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isof... 311 1e-95
ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ana... 310 2e-95
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme... 308 1e-94
ref|XP_013639225.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 303 1e-94
ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ana... 308 2e-94
gb|PRQ41045.1| putative RNA-directed RNA polymerase [Rosa chinen... 306 3e-94
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme... 307 3e-94
gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas c... 310 4e-94
ref|XP_024193313.1| probable RNA-dependent RNA polymerase 1 [Ros... 306 4e-94
ref|XP_021594292.1| RNA-dependent RNA polymerase 1 [Manihot escu... 306 6e-94
ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus... 301 3e-93
>ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
ref|XP_020269098.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
gb|ONK67125.1| uncharacterized protein A4U43_C06F15970 [Asparagus officinalis]
Length = 1128
Score = 357 bits (915), Expect = e-112
Identities = 181/219 (82%), Positives = 195/219 (89%)
Frame = +2
Query: 2 NEKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLG 181
+EKRTK+YKRIL++L+NGI IGDK+FEFLAFSSSQLR+NSAWMFAS+ LTA IR WLG
Sbjct: 428 DEKRTKIYKRILNVLKNGIIIGDKKFEFLAFSSSQLRDNSAWMFASKGALTAAGIRTWLG 487
Query: 182 DFSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFAR 361
DF+KIRNVAKYAARLGQSFSSSTETLTVR DE+EIIHDIENAAGYLFSDGIGKISAEFAR
Sbjct: 488 DFTKIRNVAKYAARLGQSFSSSTETLTVRRDEIEIIHDIENAAGYLFSDGIGKISAEFAR 547
Query: 362 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSK 541
RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDP FES NIKLDVLAY+K
Sbjct: 548 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPTSLKKLSLRKSMSKFESENIKLDVLAYTK 607
Query: 542 YQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
YQPCFLNRQLITLLSTLGVKD+VF+MKQ+ IV QLDEIL
Sbjct: 608 YQPCFLNRQLITLLSTLGVKDEVFQMKQDEIVKQLDEIL 646
>ref|XP_020675735.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Dendrobium
catenatum]
Length = 950
Score = 332 bits (851), Expect = e-104
Identities = 166/219 (75%), Positives = 188/219 (85%)
Frame = +2
Query: 2 NEKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLG 181
+ +RT++Y+RIL LRNGI IGDK+FEFLAFS+SQLRENSAWMFAS G+TA IR W+G
Sbjct: 247 SSRRTEIYQRILSTLRNGITIGDKKFEFLAFSASQLRENSAWMFASSNGVTAAGIRNWMG 306
Query: 182 DFSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFAR 361
+FS+IRNVAKYAARLGQSF SSTETLTV DEVE I DIEN+AGY+FSDGIGKIS++FAR
Sbjct: 307 NFSRIRNVAKYAARLGQSFGSSTETLTVSRDEVEFIRDIENSAGYIFSDGIGKISSKFAR 366
Query: 362 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSK 541
RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDP +ES NIKLDVLAYSK
Sbjct: 367 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPMSVRKLSLRDSMCKYESENIKLDVLAYSK 426
Query: 542 YQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
YQPCFLNRQLITLLSTLGV+D+VFE KQ+ +V+QLD+IL
Sbjct: 427 YQPCFLNRQLITLLSTLGVRDNVFEKKQDEVVNQLDDIL 465
>gb|PKU78010.1| RNA-dependent RNA polymerase 1 [Dendrobium catenatum]
Length = 969
Score = 332 bits (851), Expect = e-104
Identities = 166/219 (75%), Positives = 188/219 (85%)
Frame = +2
Query: 2 NEKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLG 181
+ +RT++Y+RIL LRNGI IGDK+FEFLAFS+SQLRENSAWMFAS G+TA IR W+G
Sbjct: 266 SSRRTEIYQRILSTLRNGITIGDKKFEFLAFSASQLRENSAWMFASSNGVTAAGIRNWMG 325
Query: 182 DFSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFAR 361
+FS+IRNVAKYAARLGQSF SSTETLTV DEVE I DIEN+AGY+FSDGIGKIS++FAR
Sbjct: 326 NFSRIRNVAKYAARLGQSFGSSTETLTVSRDEVEFIRDIENSAGYIFSDGIGKISSKFAR 385
Query: 362 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSK 541
RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDP +ES NIKLDVLAYSK
Sbjct: 386 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPMSVRKLSLRDSMCKYESENIKLDVLAYSK 445
Query: 542 YQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
YQPCFLNRQLITLLSTLGV+D+VFE KQ+ +V+QLD+IL
Sbjct: 446 YQPCFLNRQLITLLSTLGVRDNVFEKKQDEVVNQLDDIL 484
>ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Dendrobium
catenatum]
Length = 1145
Score = 332 bits (851), Expect = e-103
Identities = 166/219 (75%), Positives = 188/219 (85%)
Frame = +2
Query: 2 NEKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLG 181
+ +RT++Y+RIL LRNGI IGDK+FEFLAFS+SQLRENSAWMFAS G+TA IR W+G
Sbjct: 442 SSRRTEIYQRILSTLRNGITIGDKKFEFLAFSASQLRENSAWMFASSNGVTAAGIRNWMG 501
Query: 182 DFSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFAR 361
+FS+IRNVAKYAARLGQSF SSTETLTV DEVE I DIEN+AGY+FSDGIGKIS++FAR
Sbjct: 502 NFSRIRNVAKYAARLGQSFGSSTETLTVSRDEVEFIRDIENSAGYIFSDGIGKISSKFAR 561
Query: 362 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSK 541
RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDP +ES NIKLDVLAYSK
Sbjct: 562 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPMSVRKLSLRDSMCKYESENIKLDVLAYSK 621
Query: 542 YQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
YQPCFLNRQLITLLSTLGV+D+VFE KQ+ +V+QLD+IL
Sbjct: 622 YQPCFLNRQLITLLSTLGVRDNVFEKKQDEVVNQLDDIL 660
>gb|PKA52371.1| RNA-dependent RNA polymerase 1 [Apostasia shenzhenica]
Length = 1145
Score = 330 bits (845), Expect = e-102
Identities = 167/219 (76%), Positives = 185/219 (84%)
Frame = +2
Query: 2 NEKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLG 181
+ + T +Y+RIL LRNGI IGDK+FEFLAFSSSQLRENS WMFAS GLTA IR+W+G
Sbjct: 439 SSRHTAIYERILSTLRNGITIGDKKFEFLAFSSSQLRENSTWMFASNNGLTAAGIRKWMG 498
Query: 182 DFSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFAR 361
+FS+IRNVAKY+ARLGQSFSSSTETLTVR DEVEII DIEN+AGY+FSDGIGKIS EFA+
Sbjct: 499 NFSRIRNVAKYSARLGQSFSSSTETLTVRPDEVEIIPDIENSAGYIFSDGIGKISPEFAK 558
Query: 362 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSK 541
RVA KCGLKSSTPSAFQIRYGGYKGVVAVDP ++S NIKLDVLAYSK
Sbjct: 559 RVAKKCGLKSSTPSAFQIRYGGYKGVVAVDPVSLQKLSLRNSMCKYDSDNIKLDVLAYSK 618
Query: 542 YQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
YQPCFLNRQLITLLSTLGV DDVF+ KQE +DQLD+IL
Sbjct: 619 YQPCFLNRQLITLLSTLGVCDDVFKSKQEEAIDQLDDIL 657
>ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Phalaenopsis
equestris]
Length = 1140
Score = 329 bits (844), Expect = e-102
Identities = 168/217 (77%), Positives = 180/217 (82%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+RTK+YKRIL LRNGI IGDK FEFLAFSSSQLRENS WMFAS G+TA IR W+GDF
Sbjct: 440 RRTKIYKRILSTLRNGITIGDKNFEFLAFSSSQLRENSTWMFASSNGVTAASIRNWMGDF 499
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
+I+NVAKYAARLGQSF SSTETLTV DEVE I DIEN+AGY FSDGIGKIS+EFA+RV
Sbjct: 500 GRIKNVAKYAARLGQSFGSSTETLTVCRDEVEFIRDIENSAGYNFSDGIGKISSEFAKRV 559
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
AIKCGLKSSTPSAFQIRYGGYKGVVA+DP FES NIKLDVLAYSKYQ
Sbjct: 560 AIKCGLKSSTPSAFQIRYGGYKGVVALDPKSVRKLSLRNSMCKFESNNIKLDVLAYSKYQ 619
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLGV D++FE KQ IVDQLD IL
Sbjct: 620 PCFLNRQLITLLSTLGVCDNIFEKKQNEIVDQLDNIL 656
>ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
equestris]
ref|XP_020584590.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
equestris]
Length = 1156
Score = 329 bits (844), Expect = e-102
Identities = 168/217 (77%), Positives = 180/217 (82%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+RTK+YKRIL LRNGI IGDK FEFLAFSSSQLRENS WMFAS G+TA IR W+GDF
Sbjct: 456 RRTKIYKRILSTLRNGITIGDKNFEFLAFSSSQLRENSTWMFASSNGVTAASIRNWMGDF 515
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
+I+NVAKYAARLGQSF SSTETLTV DEVE I DIEN+AGY FSDGIGKIS+EFA+RV
Sbjct: 516 GRIKNVAKYAARLGQSFGSSTETLTVCRDEVEFIRDIENSAGYNFSDGIGKISSEFAKRV 575
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
AIKCGLKSSTPSAFQIRYGGYKGVVA+DP FES NIKLDVLAYSKYQ
Sbjct: 576 AIKCGLKSSTPSAFQIRYGGYKGVVALDPKSVRKLSLRNSMCKFESNNIKLDVLAYSKYQ 635
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLGV D++FE KQ IVDQLD IL
Sbjct: 636 PCFLNRQLITLLSTLGVCDNIFEKKQNEIVDQLDNIL 672
>gb|ABS11001.1| RNA-dependent RNA polymerase 1, partial [Nicotiana clevelandii]
Length = 243
Score = 295 bits (755), Expect = 2e-98
Identities = 155/222 (69%), Positives = 173/222 (77%), Gaps = 3/222 (1%)
Frame = +2
Query: 2 NEKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLG 181
N RT +Y RIL LRNG IGDKRFEFLAFSSSQLR+NS WMFASR GLTA DIR+W+G
Sbjct: 13 NGIRTDIYLRILSTLRNGFVIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRKWMG 72
Query: 182 DFSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIE---NAAGYLFSDGIGKISAE 352
+F +IRNVAKYAARLGQSF SS ETL+V EVE+I D+ + Y+FSDGIGKISA+
Sbjct: 73 EFQQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKISAD 132
Query: 353 FARRVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLA 532
FARRVAIKCGL+ TP +FQIRYGGYKGVVAVDP +ES NIKLDVL
Sbjct: 133 FARRVAIKCGLQ-YTPFSFQIRYGGYKGVVAVDPYSSMKLSLRNSMLKYESNNIKLDVLG 191
Query: 533 YSKYQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
+SKYQPC+LNRQL+TLLSTLGVKDDVFE KQ VDQLD IL
Sbjct: 192 WSKYQPCYLNRQLVTLLSTLGVKDDVFEQKQNEAVDQLDAIL 233
>ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Ananas comosus]
Length = 1133
Score = 311 bits (797), Expect = 1e-95
Identities = 158/217 (72%), Positives = 177/217 (81%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+ T LYKRIL +LRNGIAIG+K+FEFLAFSSSQLR+NSAWMFAS +TA+DIR+W+GDF
Sbjct: 434 RHTALYKRILSVLRNGIAIGNKKFEFLAFSSSQLRDNSAWMFASGIEVTASDIRKWMGDF 493
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
IRNVAKYAARLGQSFSSSTETL+V EV+II D+ N Y FSDGIGKISA+FARRV
Sbjct: 494 RSIRNVAKYAARLGQSFSSSTETLSVGRHEVDIIDDVYNGTSYCFSDGIGKISADFARRV 553
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
A KCGLK S PSAFQIRYGGYKGVVAVDP +ES N KLDVLAY+KYQ
Sbjct: 554 AAKCGLKRSIPSAFQIRYGGYKGVVAVDPTSSKKLSLRRSMSKYESANTKLDVLAYTKYQ 613
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLG+ D +FEMKQE V+QLD+IL
Sbjct: 614 PCFLNRQLITLLSTLGISDSIFEMKQEAAVNQLDKIL 650
>ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Ananas comosus]
Length = 1147
Score = 311 bits (797), Expect = 1e-95
Identities = 158/217 (72%), Positives = 177/217 (81%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+ T LYKRIL +LRNGIAIG+K+FEFLAFSSSQLR+NSAWMFAS +TA+DIR+W+GDF
Sbjct: 448 RHTALYKRILSVLRNGIAIGNKKFEFLAFSSSQLRDNSAWMFASGIEVTASDIRKWMGDF 507
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
IRNVAKYAARLGQSFSSSTETL+V EV+II D+ N Y FSDGIGKISA+FARRV
Sbjct: 508 RSIRNVAKYAARLGQSFSSSTETLSVGRHEVDIIDDVYNGTSYCFSDGIGKISADFARRV 567
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
A KCGLK S PSAFQIRYGGYKGVVAVDP +ES N KLDVLAY+KYQ
Sbjct: 568 AAKCGLKRSIPSAFQIRYGGYKGVVAVDPTSSKKLSLRRSMSKYESANTKLDVLAYTKYQ 627
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLG+ D +FEMKQE V+QLD+IL
Sbjct: 628 PCFLNRQLITLLSTLGISDSIFEMKQEAAVNQLDKIL 664
>ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020090855.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020090856.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
Length = 1133
Score = 310 bits (795), Expect = 2e-95
Identities = 158/217 (72%), Positives = 176/217 (81%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+ T LYKRIL +LRNGIAIG+K+FEFLAFSSSQLR+NSAWMFAS +TA IREW+GDF
Sbjct: 434 RHTALYKRILSVLRNGIAIGNKKFEFLAFSSSQLRDNSAWMFASGIEVTANHIREWMGDF 493
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
IRNVAKYAARLGQSFSSSTETL V EV+II D+ N Y FSDGIGKISA+FARRV
Sbjct: 494 RSIRNVAKYAARLGQSFSSSTETLCVGRHEVDIIDDVYNGTSYCFSDGIGKISADFARRV 553
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
A KCGLK STPSAFQIRYGGYKGVVAVDP +ES N+KLDVLAY+KYQ
Sbjct: 554 AAKCGLKRSTPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMSKYESTNMKLDVLAYTKYQ 613
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLG++D +FE KQE V+QLD+IL
Sbjct: 614 PCFLNRQLITLLSTLGIRDSIFETKQEAAVNQLDKIL 650
>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
ref|XP_008812978.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
Length = 1131
Score = 308 bits (790), Expect = 1e-94
Identities = 161/219 (73%), Positives = 179/219 (81%)
Frame = +2
Query: 2 NEKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLG 181
NE T LY+RIL +LRNGI IGDK+FEFLAFSSSQLRENSAWMFAS LTA IR+W+G
Sbjct: 429 NEMHTALYRRILSVLRNGITIGDKKFEFLAFSSSQLRENSAWMFASNERLTAAAIRKWMG 488
Query: 182 DFSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFAR 361
DF +IRNVAKYAARLGQSFSSSTETLTV +V+ I D+ Y+FSDGIGKISAEFA+
Sbjct: 489 DFHEIRNVAKYAARLGQSFSSSTETLTVDKHDVDDIPDVRYGK-YVFSDGIGKISAEFAK 547
Query: 362 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSK 541
RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDP ++S N KLDVLAYSK
Sbjct: 548 RVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPTSSKKLSLRESMRKYKSDNTKLDVLAYSK 607
Query: 542 YQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
+QPCFLNRQLITLLSTLGV+D +FEMKQE V+QLD+IL
Sbjct: 608 HQPCFLNRQLITLLSTLGVRDWIFEMKQEEAVNQLDKIL 646
>ref|XP_013639225.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Brassica oleracea
var. oleracea]
Length = 839
Score = 303 bits (776), Expect = 1e-94
Identities = 157/220 (71%), Positives = 177/220 (80%), Gaps = 3/220 (1%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+RTKLY+RI +LR+GI IGDKRFEFLAFSSSQLRENSAWMFA G+TA DIR W+G+F
Sbjct: 157 RRTKLYERINSVLRDGIVIGDKRFEFLAFSSSQLRENSAWMFAPVNGITAADIRAWMGEF 216
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIE---NAAGYLFSDGIGKISAEFA 358
IRNVAKYAARLGQSFSSS ETLTVR DE+E+I D+E + A Y+FSDGIGKISAEFA
Sbjct: 217 DNIRNVAKYAARLGQSFSSSRETLTVRRDEIEVIPDVEIRSSDAHYVFSDGIGKISAEFA 276
Query: 359 RRVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYS 538
RRVA KCGL PSA+QIRYGGYKGVVAVDP FES N KLDVLA+S
Sbjct: 277 RRVAKKCGLTEFFPSAYQIRYGGYKGVVAVDPNSSKKLSLRRSMSKFESENTKLDVLAWS 336
Query: 539 KYQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
KYQPC++NRQLITLLSTLGV+D+VFE KQ +V+QLD IL
Sbjct: 337 KYQPCYMNRQLITLLSTLGVEDNVFEKKQREVVNQLDAIL 376
>ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020089661.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
Length = 1133
Score = 308 bits (788), Expect = 2e-94
Identities = 157/217 (72%), Positives = 178/217 (82%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+ T LYKRIL +LRNGIAIG+K+FEFLAFSSSQLR+NSAWMFAS +TA+DIR+W+GDF
Sbjct: 434 RHTALYKRILSVLRNGIAIGNKKFEFLAFSSSQLRDNSAWMFASGIEMTASDIRQWMGDF 493
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
IRNVAKYAARLGQSFSSSTETL+V EV+II D+ N FSDGIGKISA+FARRV
Sbjct: 494 RSIRNVAKYAARLGQSFSSSTETLSVGRHEVDIIDDVYNGTSCCFSDGIGKISADFARRV 553
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
A K GLKSSTPSAFQIRYGGYKGVVAVDP +ES N KLDVLAY+KYQ
Sbjct: 554 AAKYGLKSSTPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMSKYESTNTKLDVLAYTKYQ 613
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLG++D +FE+KQE V+QLD+IL
Sbjct: 614 PCFLNRQLITLLSTLGIRDSIFEVKQEAAVNQLDKIL 650
>gb|PRQ41045.1| putative RNA-directed RNA polymerase [Rosa chinensis]
Length = 1026
Score = 306 bits (783), Expect = 3e-94
Identities = 160/221 (72%), Positives = 180/221 (81%), Gaps = 3/221 (1%)
Frame = +2
Query: 5 EKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGD 184
E+RT +Y+RIL LR+GI IGDK+FEFLAFSSSQLRENSAWMFASRRGLTA IR+W+GD
Sbjct: 339 ERRTSVYERILSTLRDGIVIGDKKFEFLAFSSSQLRENSAWMFASRRGLTAQGIRDWMGD 398
Query: 185 FSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAG---YLFSDGIGKISAEF 355
FS+I+NVAKYAARLGQSF SS ET TV +DE+E+I D+E G Y FSDGIGKISAEF
Sbjct: 399 FSRIKNVAKYAARLGQSFGSSRETFTVGSDEIEVIPDVEIERGGTKYCFSDGIGKISAEF 458
Query: 356 ARRVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAY 535
A RVA KCG KSSTPSAFQIRYGGYKGVVAVDP FES N KLDVLA+
Sbjct: 459 AERVARKCG-KSSTPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMWKFESRNTKLDVLAW 517
Query: 536 SKYQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
SKYQPCFLNRQLITLLSTLGVKD +FE KQ++ ++QL+ IL
Sbjct: 518 SKYQPCFLNRQLITLLSTLGVKDHIFEEKQKQAMNQLEGIL 558
>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
subsp. malaccensis]
Length = 1134
Score = 307 bits (787), Expect = 3e-94
Identities = 159/218 (72%), Positives = 177/218 (81%)
Frame = +2
Query: 5 EKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGD 184
EK T LY RIL L+NGI + DK+FEFLAFSSSQLRENSAWMFAS LTA +IREW+GD
Sbjct: 432 EKHTALYWRILSTLKNGITVADKKFEFLAFSSSQLRENSAWMFASNSKLTADNIREWMGD 491
Query: 185 FSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARR 364
FSKI+NVAKYAARLGQSFSSSTETL+V +E+ I D+E+A GY+FSDGIGKIS+EFA++
Sbjct: 492 FSKIKNVAKYAARLGQSFSSSTETLSVERNEINFIPDVEHA-GYVFSDGIGKISSEFAKK 550
Query: 365 VAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKY 544
VA KCGLKSS PSAFQIRY GYKGVVAVDP FES N KLDVLAYSKY
Sbjct: 551 VATKCGLKSSVPSAFQIRYAGYKGVVAVDPTSSKKLSLRKSMSKFESTNTKLDVLAYSKY 610
Query: 545 QPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
QPCFLNRQLITLLSTLGVKD+VFE K E V+ LD+IL
Sbjct: 611 QPCFLNRQLITLLSTLGVKDNVFERKLEEAVNDLDKIL 648
>gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas comosus]
Length = 3431
Score = 310 bits (795), Expect = 4e-94
Identities = 158/217 (72%), Positives = 176/217 (81%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+ T LYKRIL +LRNGIAIG+K+FEFLAFSSSQLR+NSAWMFAS +TA IREW+GDF
Sbjct: 471 RHTALYKRILSVLRNGIAIGNKKFEFLAFSSSQLRDNSAWMFASGIEVTANHIREWMGDF 530
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
IRNVAKYAARLGQSFSSSTETL V EV+II D+ N Y FSDGIGKISA+FARRV
Sbjct: 531 RSIRNVAKYAARLGQSFSSSTETLCVGRHEVDIIDDVYNGTSYCFSDGIGKISADFARRV 590
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
A KCGLK STPSAFQIRYGGYKGVVAVDP +ES N+KLDVLAY+KYQ
Sbjct: 591 AAKCGLKRSTPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMSKYESTNMKLDVLAYTKYQ 650
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLG++D +FE KQE V+QLD+IL
Sbjct: 651 PCFLNRQLITLLSTLGIRDSIFETKQEAAVNQLDKIL 687
Score = 308 bits (788), Expect = 4e-93
Identities = 157/217 (72%), Positives = 175/217 (80%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+ T LYKRIL +LRNGIAIG+K+FEFLAFSSSQLR+NSAWMFAS +TA DIR+W+GDF
Sbjct: 1586 RHTALYKRILSVLRNGIAIGNKKFEFLAFSSSQLRDNSAWMFASGIEMTANDIRQWMGDF 1645
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
IRNVAKYAARLGQSFSSSTETL+V EV+II D+ N Y FSDGIGKISA+FARRV
Sbjct: 1646 RSIRNVAKYAARLGQSFSSSTETLSVGRHEVDIIDDVYNGTSYCFSDGIGKISADFARRV 1705
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
A KCGLK S PSAFQIRYGGYKGVVAVDP +ES N KLDVLAY+KYQ
Sbjct: 1706 AAKCGLKHSIPSAFQIRYGGYKGVVAVDPTSSKKLSLRRSMSKYESANTKLDVLAYTKYQ 1765
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
PCFLNRQLITLLSTLG++D +FE KQE V+QLD IL
Sbjct: 1766 PCFLNRQLITLLSTLGIRDSIFEGKQEAAVNQLDIIL 1802
Score = 303 bits (776), Expect = 1e-91
Identities = 156/217 (71%), Positives = 177/217 (81%)
Frame = +2
Query: 8 KRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGDF 187
+ T LYKRIL +LRNGIAIG+K+FEFLAFSSSQLR+NSAWMFAS +TA+DIR+W+GDF
Sbjct: 2714 RHTALYKRILSVLRNGIAIGNKKFEFLAFSSSQLRDNSAWMFASGIEMTASDIRQWMGDF 2773
Query: 188 SKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAGYLFSDGIGKISAEFARRV 367
IRNVAKYAARLGQSFSSSTETL+V EV+II D+ N FSDGIGKISA+FARRV
Sbjct: 2774 RSIRNVAKYAARLGQSFSSSTETLSVGRHEVDIIDDVYNGTSCCFSDGIGKISADFARRV 2833
Query: 368 AIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAYSKYQ 547
A K GLKSSTPSAFQIRYGGYKGVVAVDP +ES N KLDVLAY+KYQ
Sbjct: 2834 AAKYGLKSSTPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMSKYESTNTKLDVLAYTKYQ 2893
Query: 548 PCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
P FLNRQLITLLSTLG++D +FE+KQE V+QLD+IL
Sbjct: 2894 PGFLNRQLITLLSTLGIRDSIFEVKQEAAVNQLDKIL 2930
>ref|XP_024193313.1| probable RNA-dependent RNA polymerase 1 [Rosa chinensis]
Length = 1059
Score = 306 bits (783), Expect = 4e-94
Identities = 160/221 (72%), Positives = 180/221 (81%), Gaps = 3/221 (1%)
Frame = +2
Query: 5 EKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGD 184
E+RT +Y+RIL LR+GI IGDK+FEFLAFSSSQLRENSAWMFASRRGLTA IR+W+GD
Sbjct: 372 ERRTSVYERILSTLRDGIVIGDKKFEFLAFSSSQLRENSAWMFASRRGLTAQGIRDWMGD 431
Query: 185 FSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAG---YLFSDGIGKISAEF 355
FS+I+NVAKYAARLGQSF SS ET TV +DE+E+I D+E G Y FSDGIGKISAEF
Sbjct: 432 FSRIKNVAKYAARLGQSFGSSRETFTVGSDEIEVIPDVEIERGGTKYCFSDGIGKISAEF 491
Query: 356 ARRVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAY 535
A RVA KCG KSSTPSAFQIRYGGYKGVVAVDP FES N KLDVLA+
Sbjct: 492 AERVARKCG-KSSTPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMWKFESRNTKLDVLAW 550
Query: 536 SKYQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
SKYQPCFLNRQLITLLSTLGVKD +FE KQ++ ++QL+ IL
Sbjct: 551 SKYQPCFLNRQLITLLSTLGVKDHIFEEKQKQAMNQLEGIL 591
>ref|XP_021594292.1| RNA-dependent RNA polymerase 1 [Manihot esculenta]
gb|OAY29319.1| hypothetical protein MANES_15G135600 [Manihot esculenta]
Length = 1132
Score = 306 bits (785), Expect = 6e-94
Identities = 158/221 (71%), Positives = 178/221 (80%), Gaps = 3/221 (1%)
Frame = +2
Query: 5 EKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGD 184
++RT +YKRIL L+NGI IG K+FEFLAFSSSQLRENS WMFASR GLTA DIR+W+G+
Sbjct: 429 DRRTLIYKRILSTLQNGIVIGKKKFEFLAFSSSQLRENSCWMFASRYGLTAADIRDWMGN 488
Query: 185 FSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAG---YLFSDGIGKISAEF 355
F +IRNVAKYAARLGQSFSSSTETL+V DE+EII DIE G Y+FSDGIGKISAEF
Sbjct: 489 FRQIRNVAKYAARLGQSFSSSTETLSVSRDEIEIIPDIEIERGRMKYVFSDGIGKISAEF 548
Query: 356 ARRVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAY 535
A+RVA+KCGLK +PSAFQIRYGGYKGVVAVDP +ES N KLDVLAY
Sbjct: 549 AKRVALKCGLKGFSPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMCKYESENTKLDVLAY 608
Query: 536 SKYQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
SKYQPCF+NRQLITLLSTLGV D +FE KQ VDQL+ +L
Sbjct: 609 SKYQPCFINRQLITLLSTLGVPDHIFEKKQREAVDQLNAML 649
>ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus suber]
Length = 890
Score = 301 bits (770), Expect = 3e-93
Identities = 155/221 (70%), Positives = 177/221 (80%), Gaps = 3/221 (1%)
Frame = +2
Query: 5 EKRTKLYKRILDILRNGIAIGDKRFEFLAFSSSQLRENSAWMFASRRGLTATDIREWLGD 184
++RT +YKRIL ILRNG+ IGDK+FEFLAFSSSQLRENS WMFASR+GL A DIREW+G+
Sbjct: 436 DRRTGIYKRILSILRNGLVIGDKKFEFLAFSSSQLRENSLWMFASRKGLNAADIREWMGN 495
Query: 185 FSKIRNVAKYAARLGQSFSSSTETLTVRADEVEIIHDIENAAG---YLFSDGIGKISAEF 355
F +I+NVAKYAARLGQSFSSSTETL+V EV+II DIE G Y+FSDGIGKISAEF
Sbjct: 496 FRQIKNVAKYAARLGQSFSSSTETLSVGRHEVDIIPDIEIKYGGVNYVFSDGIGKISAEF 555
Query: 356 ARRVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPAXXXXXXXXXXXXXFESMNIKLDVLAY 535
A++VA+KC K TPSAFQIRY GYKGVVA+DP +ES N KLDVLA+
Sbjct: 556 AKKVALKCNCKGQTPSAFQIRYAGYKGVVAIDPTSFVKLSLRKSMSKYESNNTKLDVLAF 615
Query: 536 SKYQPCFLNRQLITLLSTLGVKDDVFEMKQERIVDQLDEIL 658
SK+QPCFLNRQLITLLSTLGV+D VFE KQ V+QLD IL
Sbjct: 616 SKFQPCFLNRQLITLLSTLGVEDYVFEKKQREAVEQLDAIL 656