BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00033937
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   113   3e-29
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]   111   6e-29
emb|CAN71250.1| hypothetical protein VITISV_027849 [Vitis vinifera]   116   2e-28
emb|CAN78042.1| hypothetical protein VITISV_041808 [Vitis vinifera]   110   6e-27
emb|CAN79071.1| hypothetical protein VITISV_025552 [Vitis vinifera]   107   5e-26
emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]   109   6e-26
gb|PKA62506.1| Retrovirus-related Pol polyprotein from transposo...   102   6e-26
emb|CAN72201.1| hypothetical protein VITISV_014985 [Vitis vinifera]   105   6e-26
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   105   4e-25
emb|CAN75270.1| hypothetical protein VITISV_022685 [Vitis vinifera]   103   5e-25
ref|XP_019057729.1| PREDICTED: uncharacterized protein LOC109116...   105   5e-25
emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]   108   7e-25
ref|XP_019056652.1| PREDICTED: uncharacterized protein LOC109116...   105   3e-24
emb|CAN79641.1| hypothetical protein VITISV_017030 [Vitis vinifera]   108   4e-24
ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807...    96   7e-24
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]   100   1e-23
gb|KYP30935.1| Retrovirus-related Pol polyprotein from transposo...    92   4e-23
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   102   6e-23
gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]        98   7e-23
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                     99   1e-22

>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  113 bits (283), Expect(2) = 3e-29
 Identities = 56/89 (62%), Positives = 66/89 (74%)
 Frame = -1

Query: 269  LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
            L QLDVNNA  QG LSE V+ AQP  F+D+D PS+VCKL K IYGLKQA RAWYHEL+QF
Sbjct: 950  LRQLDVNNAFLQGRLSENVFMAQPPGFVDSDHPSYVCKLHKAIYGLKQAPRAWYHELRQF 1009

Query: 89   LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
            L+ S F NSH  TSLF++ +  H  +L V
Sbjct: 1010 LLTSGFKNSHSDTSLFVLRSSNHVVYLLV 1038



 Score = 42.7 bits (99), Expect(2) = 3e-29
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           RY ARLV  G HQR GV+YH+TFS VV+P
Sbjct: 905 RYKARLVAKGFHQRPGVDYHETFSPVVKP 933


>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
          Length = 555

 Score =  111 bits (278), Expect(2) = 6e-29
 Identities = 54/87 (62%), Positives = 64/87 (73%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QG LSE V+ AQP  F+D+D PS+VCKL K IYGLKQA RAWYH+L+QF
Sbjct: 363 LRQLDVNNAFLQGRLSENVFMAQPPSFVDSDHPSYVCKLHKAIYGLKQAPRAWYHKLRQF 422

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFL 9
           L+ S F NSH  TSLF+  +  H  +L
Sbjct: 423 LLTSGFKNSHSDTSLFVFRSSNHVLYL 449



 Score = 43.5 bits (101), Expect(2) = 6e-29
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           RY A LV  G HQR GV+YH+TFSLVV+P
Sbjct: 318 RYKAHLVAKGFHQRPGVDYHETFSLVVKP 346


>emb|CAN71250.1| hypothetical protein VITISV_027849 [Vitis vinifera]
          Length = 445

 Score =  116 bits (290), Expect(2) = 2e-28
 Identities = 57/89 (64%), Positives = 69/89 (77%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QGHLSE VY +QP  F+D D P+HVCKL K IY LKQA RAWYH+L++F
Sbjct: 102 LRQLDVNNAFLQGHLSEDVYVSQPPGFVDLDNPTHVCKLXKXIYRLKQAPRAWYHKLRKF 161

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
           L+AS F NSH  TSLF+++TGG+  +L V
Sbjct: 162 LIASXFHNSHXDTSLFVLNTGGNLLYLLV 190



 Score = 37.0 bits (84), Expect(2) = 2e-28
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           R+ A LV  G HQR  ++YHDTFS VV+P
Sbjct: 57  RHKAXLVAKGFHQRPXIDYHDTFSPVVKP 85


>emb|CAN78042.1| hypothetical protein VITISV_041808 [Vitis vinifera]
          Length = 595

 Score =  110 bits (276), Expect(2) = 6e-27
 Identities = 56/89 (62%), Positives = 67/89 (75%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QGHLS+VVY +QP  F   D  +HVCKL K IYGLKQA RAWYHEL++F
Sbjct: 245 LRQLDVNNAFLQGHLSKVVYMSQPPGFFYLDNLTHVCKLRKAIYGLKQAPRAWYHELRKF 304

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
           L+AS F NSHV TSLF+++ G +  +L V
Sbjct: 305 LIASGFHNSHVDTSLFVLNNGVNLLYLLV 333



 Score = 37.7 bits (86), Expect(2) = 6e-27
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           ++ ARLV  G HQ+  ++YHDTFSLVV+P
Sbjct: 200 KHKARLVVKGFHQQPRLDYHDTFSLVVKP 228


>emb|CAN79071.1| hypothetical protein VITISV_025552 [Vitis vinifera]
          Length = 243

 Score =  107 bits (266), Expect(2) = 5e-26
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVN A  QGHL E VY A+P  F+D+++P ++CKL K IYGLKQ   AWYHEL+QF
Sbjct: 98  LHQLDVNXAFLQGHLFEDVYMAEPPSFVDSNYPFYMCKLHKAIYGLKQTPHAWYHELRQF 157

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFL 9
           L+ S F NS+V TSLF ++T  H  +L
Sbjct: 158 LIVSDFKNSYVDTSLFTLNTSSHTIYL 184



 Score = 38.5 bits (88), Expect(2) = 5e-26
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
 Frame = -3

Query: 513 HLLTRHLTMED--------D*QIQYMDTYSWHEHILRYNARLVPWGCHQRFGVNYHDTFS 358
           +L+TR  T++D          +I  M    +   I ++ ARLV  G +Q+  V YHDTFS
Sbjct: 17  NLITRLTTLDDLEPTTLNPSLKISKMTKRQFDGSIDKFKARLVVKGFNQQPRVXYHDTFS 76

Query: 357 LVVEPAM 337
           LVV+P +
Sbjct: 77  LVVKPTI 83


>emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]
          Length = 807

 Score =  109 bits (272), Expect(2) = 6e-26
 Identities = 58/89 (65%), Positives = 64/89 (71%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  Q  LSE VY AQ   FID D P+HVCKL K IYGLKQA RAWYHEL+QF
Sbjct: 492 LHQLDVNNAFLQSTLSETVYMAQFPGFIDADKPTHVCKLHKAIYGLKQASRAWYHELRQF 551

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
           LV S F NSH +TSLFI+  G +  +L V
Sbjct: 552 LVDSGFKNSHSNTSLFILHAGTNLLYLLV 580



 Score = 35.8 bits (81), Expect(2) = 6e-26
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = -3

Query: 435 ILRYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           I R+ ARLV  G HQR GV+Y +TF+ V++P
Sbjct: 445 IERFKARLVAKGFHQRPGVDYLETFNPVIKP 475


>gb|PKA62506.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 763

 Score =  102 bits (254), Expect(2) = 6e-26
 Identities = 52/77 (67%), Positives = 57/77 (74%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QG L+E VY  QP  FIDTD P HVCKL K IYGLKQA  AWY+EL+QF
Sbjct: 660 LRQLDVNNAFLQGTLTEDVYMQQPQGFIDTDHPKHVCKLRKAIYGLKQAPCAWYNELRQF 719

Query: 89  LVASSFVNSHVSTSLFI 39
           L+ S F+NS   TSLFI
Sbjct: 720 LLHSGFINSTADTSLFI 736



 Score = 42.7 bits (99), Expect(2) = 6e-26
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           RY ARLV  G HQR GV+YH+TFS VV+P
Sbjct: 615 RYKARLVAKGFHQRPGVDYHETFSPVVKP 643


>emb|CAN72201.1| hypothetical protein VITISV_014985 [Vitis vinifera]
          Length = 398

 Score =  105 bits (262), Expect(2) = 6e-26
 Identities = 54/87 (62%), Positives = 59/87 (67%)
 Frame = -1

Query: 287 LESDPFLCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWY 108
           +  D  L QLDVNN   Q H SE VY AQP EF+D D P HVCKL K IYGLKQA RAWY
Sbjct: 83  ISKDWQLRQLDVNNVFLQSHRSEDVYMAQPPEFVDRDNPIHVCKLKKAIYGLKQAPRAWY 142

Query: 107 HELKQFLVASSFVNSHVSTSLFIVSTG 27
            EL QFL+ S F  SH  TSLFI+ +G
Sbjct: 143 LELCQFLIESGFTKSHADTSLFILHSG 169



 Score = 39.7 bits (91), Expect(2) = 6e-26
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           RY A+LV    HQR  V+YHDTFSLVV+P
Sbjct: 44  RYKAKLVAKCFHQRPDVDYHDTFSLVVKP 72


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  105 bits (261), Expect(2) = 4e-25
 Identities = 52/83 (62%), Positives = 57/83 (68%)
 Frame = -1

Query: 269  LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
            L QLDVNN   QG L+E VY  QP  FID D PSHVCKL K IYGLKQA RAWY EL+ F
Sbjct: 760  LRQLDVNNVFLQGTLTEHVYMTQPPGFIDQDSPSHVCKLKKAIYGLKQAPRAWYQELRSF 819

Query: 89   LVASSFVNSHVSTSLFIVSTGGH 21
            L+   F NSH  TSLF++   GH
Sbjct: 820  LLQFGFTNSHADTSLFVLKFRGH 842



 Score = 37.4 bits (85), Expect(2) = 4e-25
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           R+ ARLV  G HQR  ++Y+DTFS VV+P
Sbjct: 715 RFKARLVAKGFHQRPDIDYYDTFSPVVKP 743


>emb|CAN75270.1| hypothetical protein VITISV_022685 [Vitis vinifera]
          Length = 774

 Score =  103 bits (258), Expect(2) = 5e-25
 Identities = 50/78 (64%), Positives = 57/78 (73%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNN   QGH  E  Y  QP  F+D D P+H+CKL KVIYGLKQA RAWY EL+QF
Sbjct: 491 LRQLDVNNVFLQGHFFEDFYMTQPPGFVDRDNPTHICKLKKVIYGLKQAPRAWYLELRQF 550

Query: 89  LVASSFVNSHVSTSLFIV 36
           L+ S F NSH +TSLFI+
Sbjct: 551 LIESRFTNSHANTSLFIL 568



 Score = 38.1 bits (87), Expect(2) = 5e-25
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVE 346
           +Y A+LV  G HQR G++YHDTFS VV+
Sbjct: 446 KYKAKLVAKGFHQRPGMDYHDTFSPVVK 473


>ref|XP_019057729.1| PREDICTED: uncharacterized protein LOC109116546 [Tarenaya
           hassleriana]
          Length = 468

 Score =  105 bits (261), Expect(2) = 5e-25
 Identities = 52/82 (63%), Positives = 60/82 (73%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLD+NNA  QGHL + VY  QPS F+D D PSHVCKL K +YGLKQA RAWY+EL+QF
Sbjct: 60  LRQLDMNNAFLQGHLHDDVYMMQPSGFVDQDRPSHVCKLHKALYGLKQAPRAWYNELRQF 119

Query: 89  LVASSFVNSHVSTSLFIVSTGG 24
           L++S F NS   TSLFI    G
Sbjct: 120 LISSGFKNSLADTSLFIFCKHG 141



 Score = 37.0 bits (84), Expect(2) = 5e-25
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -3

Query: 417 RLVPWGCHQRFGVNYHDTFSLVVEPA 340
           RLV  G HQR G++YHDTF  V++PA
Sbjct: 19  RLVAKGFHQRPGIDYHDTFRPVIKPA 44


>emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]
          Length = 619

 Score =  108 bits (269), Expect(2) = 7e-25
 Identities = 56/89 (62%), Positives = 62/89 (69%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QG +SE VY AQP  FID D P+HVCKL K IYGLKQA R WYHEL QF
Sbjct: 244 LRQLDVNNAFLQGTISETVYMAQPPGFIDADKPTHVCKLHKAIYGLKQAPRTWYHELCQF 303

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
           LV   F NSH  TSLF++  G +  +L V
Sbjct: 304 LVDFGFKNSHSDTSLFVLHAGTNLLYLLV 332



 Score = 33.5 bits (75), Expect(2) = 7e-25
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           R+ A LV  G HQR GV+Y +TFS V++P
Sbjct: 199 RFKACLVAKGFHQRPGVDYLETFSPVIKP 227


>ref|XP_019056652.1| PREDICTED: uncharacterized protein LOC109116170 [Tarenaya
           hassleriana]
          Length = 313

 Score =  105 bits (263), Expect = 3e-24
 Identities = 52/81 (64%), Positives = 62/81 (76%)
 Frame = -1

Query: 266 CQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQFL 87
           CQLDVNNA  QG L E +Y AQP  FID D P++VCKL KV+YGLKQA RAWY+EL++FL
Sbjct: 4   CQLDVNNAFLQGSLDEDIYLAQPPGFIDRDRPTYVCKLYKVLYGLKQAHRAWYNELRRFL 63

Query: 86  VASSFVNSHVSTSLFIVSTGG 24
           + S FVNS   TSLFI++  G
Sbjct: 64  LKSGFVNSLSDTSLFILNRDG 84


>emb|CAN79641.1| hypothetical protein VITISV_017030 [Vitis vinifera]
          Length = 542

 Score =  108 bits (269), Expect = 4e-24
 Identities = 55/89 (61%), Positives = 63/89 (70%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QGHLS+ VY AQP  F+D D P+HVCKL K IYGLKQA +AWY EL QF
Sbjct: 205 LRQLDVNNAFIQGHLSKDVYMAQPXRFVDXDNPTHVCKLKKAIYGLKQAPQAWYLELCQF 264

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
            + S F NSH  TSLFI+ +G    +L V
Sbjct: 265 FIESGFTNSHAYTSLFILHSGDXTIYLLV 293


>ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807900 [Tarenaya
           hassleriana]
          Length = 1047

 Score = 95.5 bits (236), Expect(2) = 7e-24
 Identities = 53/89 (59%), Positives = 59/89 (66%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QG+LSE VY +QP  FID   P  VCKL K IYGLKQA RAWY EL+ F
Sbjct: 697 LRQLDVNNAFLQGNLSEEVYMSQPPGFIDHASPQLVCKLRKAIYGLKQAPRAWYSELRHF 756

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
           L+ S F NS    SLFI+  G  Q F+ V
Sbjct: 757 LLQSGFQNSVADASLFILHMGPVQLFVLV 785



 Score = 42.7 bits (99), Expect(2) = 7e-24
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = -3

Query: 429 RYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           RY ARLV  G HQR GV+YH+TFS VV+P
Sbjct: 652 RYKARLVAKGFHQRPGVDYHETFSPVVKP 680


>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score =  100 bits (250), Expect(2) = 1e-23
 Identities = 53/89 (59%), Positives = 61/89 (68%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L QLDVNNA  QG L+E V+ +QP  FID D P HVCKL K IYGLKQA RAWYHEL QF
Sbjct: 62  LRQLDVNNAFLQGTLTEDVFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWYHELCQF 121

Query: 89  LVASSFVNSHVSTSLFIVSTGGHQNFLHV 3
           L+   F+NS   TSLFI +   H   L++
Sbjct: 122 LLQFGFINSIADTSLFIFN--NHDTILYL 148



 Score = 36.6 bits (83), Expect(2) = 1e-23
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -3

Query: 426 YNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           Y ARLV  G HQR G++Y +TFS V++P
Sbjct: 18  YKARLVAKGFHQRPGIDYSETFSPVIKP 45


>gb|KYP30935.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 346

 Score = 92.0 bits (227), Expect(2) = 4e-23
 Identities = 45/81 (55%), Positives = 52/81 (64%)
 Frame = -1

Query: 269 LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
           L  +DVNNA   G ++E +Y AQP  FI    P HVCKL K +YGLKQA RAW+HELK F
Sbjct: 126 LTHMDVNNAFLHGTITEDIYMAQPPGFIHPTLPHHVCKLRKSLYGLKQAPRAWFHELKSF 185

Query: 89  LVASSFVNSHVSTSLFIVSTG 27
           L+   F NS   TSLFI   G
Sbjct: 186 LIRFGFTNSKSDTSLFIYHNG 206



 Score = 43.5 bits (101), Expect(2) = 4e-23
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = -3

Query: 435 ILRYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           I RY ARLV  G HQR G+++HDTFS VV+P
Sbjct: 79  IARYKARLVAKGFHQRPGIDFHDTFSPVVKP 109


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
 dbj|BAH30336.1| hypothetical protein, partial [Arabidopsis thaliana]
          Length = 1459

 Score =  102 bits (253), Expect(2) = 6e-23
 Identities = 54/81 (66%), Positives = 58/81 (71%)
 Frame = -1

Query: 269  LCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQF 90
            L QLDVNNA  QG L+E VY AQP  F+D D PSHVC+L K IYGLKQA RAWY ELKQ 
Sbjct: 1054 LKQLDVNNAFLQGTLTEEVYMAQPPGFVDKDRPSHVCRLRKAIYGLKQAPRAWYMELKQH 1113

Query: 89   LVASSFVNSHVSTSLFIVSTG 27
            L+   FVNS   TSLFI S G
Sbjct: 1114 LLNIGFVNSLADTSLFIYSHG 1134



 Score = 33.1 bits (74), Expect(2) = 6e-23
 Identities = 14/28 (50%), Positives = 22/28 (78%)
 Frame = -3

Query: 429  RYNARLVPWGCHQRFGVNYHDTFSLVVE 346
            +Y ARLV  G +Q++GV+Y +TFS V++
Sbjct: 1009 KYKARLVAKGFNQQYGVDYAETFSPVIK 1036


>gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1192

 Score = 97.8 bits (242), Expect(2) = 7e-23
 Identities = 51/87 (58%), Positives = 57/87 (65%)
 Frame = -1

Query: 287  LESDPFLCQLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWY 108
            L S   L QLDVNNA  QG L++ VY AQP  F D D PSHVCKL K IYGLKQA RAWY
Sbjct: 826  LSSGWSLKQLDVNNAFLQGTLTDEVYMAQPPGFEDKDHPSHVCKLHKAIYGLKQAPRAWY 885

Query: 107  HELKQFLVASSFVNSHVSTSLFIVSTG 27
             EL  FL+   F+NS    SLF+  +G
Sbjct: 886  QELSTFLLQYGFINSTADASLFVYKSG 912



 Score = 37.0 bits (84), Expect(2) = 7e-23
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = -3

Query: 444 HEHILRYNARLVPWGCHQRFGVNYHDTFSLVVEP 343
           H  I R+ ARLV  G HQR G+++ +TFS V++P
Sbjct: 782 HGSIDRFKARLVAKGFHQRPGLDFTETFSTVIKP 815


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score = 98.6 bits (244), Expect(2) = 1e-22
 Identities = 49/87 (56%), Positives = 62/87 (71%)
 Frame = -1

Query: 263  QLDVNNALPQGHLSEVVYRAQPSEFIDTDFPSHVCKLCKVIYGLKQALRAWYHELKQFLV 84
            Q+D+NNA  QG L+E VY +QP  FID D PSHVC+L K +YGLKQA RAWY EL++FL+
Sbjct: 1027 QVDINNAFLQGTLNEEVYVSQPPGFIDRDRPSHVCRLNKALYGLKQAPRAWYQELRRFLL 1086

Query: 83   ASSFVNSHVSTSLFIVSTGGHQNFLHV 3
             + FVNS    SLFI +   H  F++V
Sbjct: 1087 QAGFVNSLADASLFIYNR--HNTFMYV 1111



 Score = 35.8 bits (81), Expect(2) = 1e-22
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -3

Query: 453  YSWHEHILRYNARLVPWGCHQRFGVNYHDTFSLVVE 346
            Y+    I RY ARLV  G +Q++G++Y +TFS V++
Sbjct: 972  YNVDGSIARYKARLVARGFNQQYGIDYSETFSPVIK 1007