BLASTX nr result

ID: Ophiopogon23_contig00033846 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00033846
         (518 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK78999.1| uncharacterized protein A4U43_C01F1830 [Asparagus...    99   2e-23

>gb|ONK78999.1| uncharacterized protein A4U43_C01F1830 [Asparagus officinalis]
          Length = 139

 Score = 99.4 bits (246), Expect = 2e-23
 Identities = 49/90 (54%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = +2

Query: 53  SWSNVKNMLAERARHDAYKPHGFFFYNE-NYEGGSS--RAHKDVASTSNPVNYLILVRCK 223
           +W   KNM+AER R D       ++ NE NY GG    R +KD A+TS   N L+ V CK
Sbjct: 49  NWMETKNMMAERIRKDPANARWAYYSNEENYAGGRGLLRTYKDTANTSTSSNMLLTVNCK 108

Query: 224 FCMNYMMVMHEIKTCPNCGGVLANFEQERC 313
            CMNYMMVM EIK CP CGG L  FEQERC
Sbjct: 109 VCMNYMMVMQEIKACPKCGGGLVRFEQERC 138


Top