BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00033607
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA09785.1| Pentatricopeptide repeat [Macleaya cordata]            202   6e-58
gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apos...   175   2e-48
emb|CBI28813.3| unnamed protein product, partial [Vitis vinifera]     172   2e-48
ref|XP_020673278.1| pentatricopeptide repeat-containing protein ...   167   2e-48
gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dend...   167   1e-47
ref|XP_020691698.1| pentatricopeptide repeat-containing protein ...   169   3e-46
ref|XP_011622603.1| pentatricopeptide repeat-containing protein ...   156   2e-41
ref|XP_020092866.1| pentatricopeptide repeat-containing protein ...   154   1e-40
gb|OAY66084.1| Pentatricopeptide repeat-containing protein [Anan...   152   3e-40
ref|XP_020574185.1| pentatricopeptide repeat-containing protein ...   145   1e-37
ref|XP_020687921.1| pentatricopeptide repeat-containing protein ...   143   9e-37
gb|PKU59398.1| Pentatricopeptide repeat-containing protein [Dend...   143   9e-37
ref|XP_011623475.2| pentatricopeptide repeat-containing protein ...   133   2e-33
ref|XP_010918387.2| PREDICTED: pentatricopeptide repeat-containi...   130   3e-32
gb|PKA60087.1| Pentatricopeptide repeat-containing protein [Apos...   130   4e-32
ref|XP_010248175.1| PREDICTED: pentatricopeptide repeat-containi...   130   5e-32
ref|XP_011626440.2| pentatricopeptide repeat-containing protein ...   127   2e-31
gb|ABE66133.1| pentatricopeptide repeat-containing protein [Arab...   121   4e-31
ref|XP_008795409.1| PREDICTED: pentatricopeptide repeat-containi...   126   1e-30
ref|XP_010557968.1| PREDICTED: pentatricopeptide repeat-containi...   126   1e-30

>gb|OVA09785.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 779

 Score =  202 bits (514), Expect = 6e-58
 Identities = 101/162 (62%), Positives = 124/162 (76%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           DNFV+SRIL+F+ALSP+GS+PYARLLFS I  PD F  N LIRAYA S NP+ A+ FY  
Sbjct: 66  DNFVASRILSFAALSPNGSIPYARLLFSHIHKPDIFTFNTLIRAYAFSSNPIDAILFYTH 125

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           IL+S +L RPD H+FPLLL+AC E+ S+ LG  +H+Q    GL S VS+ NFLVQMYA+C
Sbjct: 126 ILES-SLLRPDIHSFPLLLKACLEIPSLSLGKAIHSQVYKLGLSSQVSILNFLVQMYASC 184

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           GLI +A++ FD I EYDDAS N+M+ G LKCG FE A +MFD
Sbjct: 185 GLIGSAKLAFDRIPEYDDASWNIMMGGFLKCGDFESACEMFD 226


>gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 627

 Score =  175 bits (443), Expect = 2e-48
 Identities = 84/162 (51%), Positives = 118/162 (72%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           DN  ++RIL+FSALSP+GSL YAR  F+     D F+ NIL+RAYAS  NP  A+ F+A+
Sbjct: 52  DNLAAARILSFSALSPTGSLTYARRFFAATAKADAFMFNILLRAYASLSNPAEAVVFFAE 111

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
            L+S  + RP   T  L+L+A ++ G++ +G M+H  AV   L +DVSVQNFLV+MY++ 
Sbjct: 112 ALESSRISRPGHRTLALVLKAASDTGALAVGKMLHGMAVKLALAADVSVQNFLVRMYSSF 171

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
            LI  AR+VFDGI ++D+AS+N+M+ G LKCG F++AR+MFD
Sbjct: 172 RLIEPARLVFDGISDFDEASKNIMIGGFLKCGLFDDARQMFD 213


>emb|CBI28813.3| unnamed protein product, partial [Vitis vinifera]
          Length = 500

 Score =  172 bits (437), Expect = 2e-48
 Identities = 90/162 (55%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           DNFV+SRIL+F+ALSP GS+PYAR LF +I  PD FIAN LIRAYA SPNP+ A+ FY++
Sbjct: 102 DNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSE 161

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           + +S ++  PD HTFPLLL+AC+E+ S+ LG  +H+     G  S+VSV NFLVQMYA+C
Sbjct: 162 MTES-SVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASC 220

Query: 362 GLIRAARIVFDGIQEYDD-ASQNVMLNGMLKCGCFEEARKMF 484
           GLI +A +VFD   E DD  S +VM+NG ++   F+E   +F
Sbjct: 221 GLIESAGLVFDRTPECDDVVSWSVMINGYVQESRFKEGLGLF 262


>ref|XP_020673278.1| pentatricopeptide repeat-containing protein At5g06540-like
           [Dendrobium catenatum]
          Length = 276

 Score =  167 bits (422), Expect = 2e-48
 Identities = 85/162 (52%), Positives = 112/162 (69%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           DN  +SRIL+  ALSPSGSLPY R LF      + F+ANIL+RAYAS PN + AL F+ +
Sbjct: 49  DNLAASRILSNPALSPSGSLPYIRRLFLTTHKAEAFMANILLRAYASLPNTIPALSFFVE 108

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
            L+S  L  PDA T  L+L+A A+ G +  G MVHA A+     SDVSVQNFLV++YA+ 
Sbjct: 109 SLESSRLHHPDATTLALILKASADAGDLSFGKMVHAMALKLAQASDVSVQNFLVRIYASF 168

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
            LI +A++VFD I   +DAS+N+ML   LKCG  ++AR++FD
Sbjct: 169 RLIESAKLVFDSISNSNDASRNIMLGAYLKCGLLDDARQVFD 210


>gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 342

 Score =  167 bits (422), Expect = 1e-47
 Identities = 85/162 (52%), Positives = 112/162 (69%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           DN  +SRIL+  ALSPSGSLPY R LF      + F+ANIL+RAYAS PN + AL F+ +
Sbjct: 49  DNLAASRILSNPALSPSGSLPYIRRLFLTTHKAEAFMANILLRAYASLPNTIPALSFFVE 108

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
            L+S  L  PDA T  L+L+A A+ G +  G MVHA A+     SDVSVQNFLV++YA+ 
Sbjct: 109 SLESSRLHHPDATTLALILKASADAGDLSFGKMVHAMALKLAQASDVSVQNFLVRIYASF 168

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
            LI +A++VFD I   +DAS+N+ML   LKCG  ++AR++FD
Sbjct: 169 RLIESAKLVFDSISNSNDASRNIMLGAYLKCGLLDDARQVFD 210


>ref|XP_020691698.1| pentatricopeptide repeat-containing protein At5g06540-like
           [Dendrobium catenatum]
 gb|PKU87528.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 624

 Score =  169 bits (427), Expect = 3e-46
 Identities = 85/162 (52%), Positives = 112/162 (69%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           DN  ++RIL+F ALSP+GSLPYAR LF      D F+ANIL+RAYAS PN   AL F+ +
Sbjct: 49  DNLAAARILSFPALSPAGSLPYARRLFLTAQKADAFMANILLRAYASLPNTNSALSFFVE 108

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
            L+S  L  PDA T  L L+A A+ G +  G MVHA A+     SDVSVQNFLV++YA+ 
Sbjct: 109 SLESSRLHHPDATTLALALKASADAGDLSFGKMVHAMALKLAQASDVSVQNFLVRIYASF 168

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
            LI +A++VFD I  ++DAS+N+ML   LKC   ++AR++FD
Sbjct: 169 RLIESAKLVFDSISNFNDASRNIMLGAYLKCDLLDDARQLFD 210


>ref|XP_011622603.1| pentatricopeptide repeat-containing protein At3g62890-like
           [Amborella trichopoda]
          Length = 646

 Score =  156 bits (394), Expect = 2e-41
 Identities = 84/163 (51%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPN-PLRALQFYA 178
           DNFV+SR+L+F+ALS SG LPYARLLF  +P PD F+AN LIR+Y S    PL+AL+FY 
Sbjct: 72  DNFVASRLLSFTALSLSGDLPYARLLFRSLPYPDTFMANTLIRSYTSVYGAPLQALEFYV 131

Query: 179 QILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAA 358
            +L S     PD HT PL+LRAC++ G++ LG  +HA  +  G  +  +V NF+V+MY+ 
Sbjct: 132 LVLSSGI--NPDIHTLPLVLRACSDAGALSLGSALHAYVIKRGWTNYSNVTNFVVKMYSE 189

Query: 359 CGLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           CG I  AR VFD + + DDAS NVML G    G  EEA+  F+
Sbjct: 190 CGSIELARRVFDEMLQLDDASWNVMLGGYANNGMLEEAQGFFE 232


>ref|XP_020092866.1| pentatricopeptide repeat-containing protein At5g66520-like [Ananas
           comosus]
          Length = 671

 Score =  154 bits (389), Expect = 1e-40
 Identities = 82/165 (49%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           D  V+SR+++ +A     SLPYA  + +Q P+PDPF  N L+RA+A  P+P  AL+FYA 
Sbjct: 96  DPSVASRLISLAA---DASLPYALSILAQTPSPDPFALNALLRAHALRPDPFGALRFYAD 152

Query: 182 ILQSLALRR---PDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMY 352
            L+S A      P+  TFP++L+AC+   ++  G MVHAQ V  GLGS  SVQNFLV MY
Sbjct: 153 ALRSPAAAEFSFPNPRTFPIILKACSLAPALRFGEMVHAQVVKVGLGSAASVQNFLVYMY 212

Query: 353 AACGLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           A+CG I  ARI FD I E + AS N+ML+  +KCG   +ARK+FD
Sbjct: 213 ASCGRIELARIAFDAISELNAASMNMMLDAYVKCGHLGDARKVFD 257


>gb|OAY66084.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
          Length = 651

 Score =  152 bits (385), Expect = 3e-40
 Identities = 81/165 (49%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           D  V+SR+++ +A     SLPYA  + +Q P+PDPF  N L+RA+A  P+P  AL+FY  
Sbjct: 76  DPSVASRLISLAA---DASLPYALSILAQTPSPDPFALNALLRAHALRPDPFGALRFYTD 132

Query: 182 ILQSLALRR---PDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMY 352
            L+S A      P+  TFP++L+AC+   ++  G MVHAQ V  GLGS  SVQNFLV MY
Sbjct: 133 ALRSPAAAEFSFPNPRTFPIILKACSLAPALRFGEMVHAQVVKVGLGSAASVQNFLVYMY 192

Query: 353 AACGLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           A+CG I  ARI FD I E + AS N+ML+  +KCG   +ARK+FD
Sbjct: 193 ASCGRIELARIAFDAISELNAASMNMMLDAYVKCGHLGDARKVFD 237


>ref|XP_020574185.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Phalaenopsis equestris]
          Length = 686

 Score =  145 bits (367), Expect = 1e-37
 Identities = 77/162 (47%), Positives = 105/162 (64%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           +N +SS++L+F ALSP+G L YA  LF Q+ +PD FI N +IR +A S NP +A+ F+  
Sbjct: 41  ENILSSKLLSFLALSPTGDLKYAHQLFDQLSSPDSFIWNTIIRGHARSSNPSQAISFFHH 100

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           ++ S     PD H++P +L ACA + S  LG   HA+   FGLGSDV V N L+QMYA C
Sbjct: 101 MVSSGV--PPDHHSYPFVLTACARMPSPALGKKFHAETFKFGLGSDVFVLNSLIQMYACC 158

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           GL+  AR +FDG    D  S NVM+ G +K G F++A + FD
Sbjct: 159 GLVVDARKLFDGNPLRDVVSWNVMIRGFVKRGEFDDAFRCFD 200



 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 38/140 (27%), Positives = 67/140 (47%)
 Frame = +2

Query: 68  ARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPLLLRAC 247
           A+  F ++   D      +I  +++  N   AL F++Q+        PD      +L  C
Sbjct: 267 AKNFFDEMGEKDLLTWTTMINGFSNLGNFRDALDFFSQMQDEGIC--PDEVVLGTILSVC 324

Query: 248 AEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYDDASQN 427
           A++G++E G  VH     + +  DV +Q  LV MYA CG +  A  VF  ++E +  + N
Sbjct: 325 AQLGALEEGKYVHHLIEKYNVKRDVVLQTALVDMYAKCGRVEFAMQVFKKMKERNVFTWN 384

Query: 428 VMLNGMLKCGCFEEARKMFD 487
            M+ G+   G   +A  +++
Sbjct: 385 AMIGGLALHGHGHQALCLYE 404


>ref|XP_020687921.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Dendrobium catenatum]
          Length = 686

 Score =  143 bits (361), Expect = 9e-37
 Identities = 79/162 (48%), Positives = 104/162 (64%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           +N +SS++L+F ALSPSG L YA+ LF Q+  PD FI N +IR +A SP P +A+ F+  
Sbjct: 41  ENILSSKLLSFLALSPSGDLNYAQQLFDQLSGPDSFIWNTIIRGHARSPKPSQAISFFHL 100

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           ++ S     PD H++P +L ACA + S ELG   HA+   FGLGSDV V N L+QMYA+C
Sbjct: 101 MVSSGV--PPDHHSYPFVLTACARMLSPELGKRFHAETFKFGLGSDVFVLNSLIQMYASC 158

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           GL   AR +FD     D  S NVM+ G +K G FEEA   F+
Sbjct: 159 GLFGDARQLFDRNPLRDVVSWNVMIRGYVKRGEFEEAFGCFE 200



 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = +2

Query: 68  ARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPLLLRAC 247
           AR LF + P  D    N++IR Y        A   + +++Q+  +  PDA T   LL AC
Sbjct: 164 ARQLFDRNPLRDVVSWNVMIRGYVKRGEFEEAFGCFEEMIQAKNMN-PDAVTMICLLSAC 222

Query: 248 AEVGSVELGLMVHAQAVTFG-LGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYDDASQ 424
           +++G  + G  +H  +   G + S++ + N ++ MY  CG +  A+ +FD + E D  + 
Sbjct: 223 SQLGDFDRGHRLHLYSRELGFIASNLQLTNVILDMYCKCGDLSLAKKLFDEMGERDLLTW 282

Query: 425 NVMLNGMLKCGCFEEARKMF 484
             M+NG    G F +A + F
Sbjct: 283 TSMINGFATLGNFRDALEFF 302



 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 40/145 (27%), Positives = 70/145 (48%)
 Frame = +2

Query: 53  GSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPL 232
           G L  A+ LF ++   D      +I  +A+  N   AL+F+ Q+        PD      
Sbjct: 262 GDLSLAKKLFDEMGERDLLTWTSMINGFATLGNFRDALEFFTQMQNERI--NPDEVVLGT 319

Query: 233 LLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYD 412
           +L  CA++G+++ G  VH     + +  D+ +Q  L+ MYA CG +  A  VF  ++E +
Sbjct: 320 MLSVCAQMGALDEGKYVHHLIEKYNVKRDIVLQTSLIDMYAKCGRVDLAMQVFKKMKERN 379

Query: 413 DASQNVMLNGMLKCGCFEEARKMFD 487
             + N M+ G+   G  + A  +F+
Sbjct: 380 VFTWNAMIGGLAIHGHGQMALDLFE 404


>gb|PKU59398.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 688

 Score =  143 bits (361), Expect = 9e-37
 Identities = 79/162 (48%), Positives = 104/162 (64%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           +N +SS++L+F ALSPSG L YA+ LF Q+  PD FI N +IR +A SP P +A+ F+  
Sbjct: 41  ENILSSKLLSFLALSPSGDLNYAQQLFDQLSGPDSFIWNTIIRGHARSPKPSQAISFFHL 100

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           ++ S     PD H++P +L ACA + S ELG   HA+   FGLGSDV V N L+QMYA+C
Sbjct: 101 MVSSGV--PPDHHSYPFVLTACARMLSPELGKRFHAETFKFGLGSDVFVLNSLIQMYASC 158

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           GL   AR +FD     D  S NVM+ G +K G FEEA   F+
Sbjct: 159 GLFGDARQLFDRNPLRDVVSWNVMIRGYVKRGEFEEAFGCFE 200



 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = +2

Query: 68  ARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPLLLRAC 247
           AR LF + P  D    N++IR Y        A   + +++Q+  +  PDA T   LL AC
Sbjct: 164 ARQLFDRNPLRDVVSWNVMIRGYVKRGEFEEAFGCFEEMIQAKNMN-PDAVTMICLLSAC 222

Query: 248 AEVGSVELGLMVHAQAVTFG-LGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYDDASQ 424
           +++G  + G  +H  +   G + S++ + N ++ MY  CG +  A+ +FD + E D  + 
Sbjct: 223 SQLGDFDRGHRLHLYSRELGFIASNLQLTNVILDMYCKCGDLSLAKKLFDEMGERDLLTW 282

Query: 425 NVMLNGMLKCGCFEEARKMF 484
             M+NG    G F +A + F
Sbjct: 283 TSMINGFATLGNFRDALEFF 302



 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 40/145 (27%), Positives = 70/145 (48%)
 Frame = +2

Query: 53  GSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPL 232
           G L  A+ LF ++   D      +I  +A+  N   AL+F+ Q+        PD      
Sbjct: 262 GDLSLAKKLFDEMGERDLLTWTSMINGFATLGNFRDALEFFTQMQNERI--NPDEVVLGT 319

Query: 233 LLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYD 412
           +L  CA++G+++ G  VH     + +  D+ +Q  L+ MYA CG +  A  VF  ++E +
Sbjct: 320 MLSVCAQMGALDEGKYVHHLIEKYNVKRDIVLQTSLIDMYAKCGRVDLAMQVFKKMKERN 379

Query: 413 DASQNVMLNGMLKCGCFEEARKMFD 487
             + N M+ G+   G  + A  +F+
Sbjct: 380 VFTWNAMIGGLAIHGHGQMALDLFE 404


>ref|XP_011623475.2| pentatricopeptide repeat-containing protein At5g61800-like
           [Amborella trichopoda]
          Length = 521

 Score =  133 bits (334), Expect = 2e-33
 Identities = 68/157 (43%), Positives = 99/157 (63%)
 Frame = +2

Query: 17  SRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSL 196
           +++L F  L P+  + YA  +F  +PNP  F  N +IRA+  S NP+ A +FYAQ+  + 
Sbjct: 42  AKLLRFFYLYPNLDITYALSIFHSVPNPTTFSLNTIIRAFTQSSNPIEATKFYAQMHSNG 101

Query: 197 ALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRA 376
              RPD HTFP +L+ACA +  ++LG  +H QAVT GL SD+ VQN L+ MY++ G +  
Sbjct: 102 I--RPDTHTFPFVLKACALMRELDLGRSIHCQAVTTGLSSDIFVQNTLIHMYSSSGSLVF 159

Query: 377 ARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           A+ VFDG+ E D  S N M+   ++ G  + ARK+FD
Sbjct: 160 AQKVFDGMDERDAVSYNAMIACFVRTGGMDFARKLFD 196



 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 49/146 (33%), Positives = 74/146 (50%)
 Frame = +2

Query: 50  SGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFP 229
           +G + +AR LF ++P  +      ++  YA       AL+ +  +L S    RPD     
Sbjct: 185 TGGMDFARKLFDEMPERNVVSWGTVLAGYAQVGQSEEALELFDSMLHSGF--RPDNVALV 242

Query: 230 LLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEY 409
             L ACA++G++E G MVH       +  DV +   L+ MYA CG I +AR +FD   E 
Sbjct: 243 TALSACAQLGALEKGKMVHDYVKRTDIRLDVYLATGLIDMYAKCGCIESARAIFDASSER 302

Query: 410 DDASQNVMLNGMLKCGCFEEARKMFD 487
           +DA+ N M+ G+   G  E A + FD
Sbjct: 303 NDATWNAMIVGLAMHGHGELALEFFD 328


>ref|XP_010918387.2| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
           [Elaeis guineensis]
          Length = 538

 Score =  130 bits (326), Expect = 3e-32
 Identities = 68/162 (41%), Positives = 99/162 (61%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           DNF+ S++L FSA+S SG + Y+  +F  +P P  FI N LIR ++ S NP  ++  Y Q
Sbjct: 44  DNFLVSKLLLFSAVSDSGDIDYSCRVFRTLPAPTIFIYNTLIRGFSKSKNPNCSISLYTQ 103

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           +L++     PD  TFP L ++CA + S+ LGL +HA     GL  D+ VQN L+ +YA+C
Sbjct: 104 MLRAGV--SPDHLTFPFLAKSCARLSSLRLGLSIHAHIAKNGLEFDLFVQNSLIHLYASC 161

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
             I + R VFDGI + +  S N +++G  KCG    AR+ FD
Sbjct: 162 DDIMSGRRVFDGISQPNTVSWNTLVDGYAKCGNLSAAREAFD 203



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
 Frame = +2

Query: 53  GSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPL 232
           G+L  AR  F  +P  D    + LI  Y        AL  +  +       + +  T   
Sbjct: 193 GNLSAAREAFDCMPERDVVSWSALIDGYVKGGEYREALALFETMQAQAGGPKANEVTMVS 252

Query: 233 LLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGI--QE 406
           +L ACA +G+++ G  +H      GL S   +   L+ MYA CG I  A  VF  +  Q+
Sbjct: 253 VLCACAHLGALDKGRKMHRHLEENGLRSSPELLTSLIDMYAKCGSIHEALEVFHAVPAQK 312

Query: 407 YDDASQNVMLNGMLKCGCFEEARKMF 484
            D    N ++ G+   G   E+ +MF
Sbjct: 313 TDVLMWNAVIGGLAMHGLGAESAEMF 338


>gb|PKA60087.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 687

 Score =  130 bits (327), Expect = 4e-32
 Identities = 69/162 (42%), Positives = 100/162 (61%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           +N ++S++ +F ALSPSG + YA  LF Q+ +PD FI N +IR +A  P P  AL F+ Q
Sbjct: 42  NNLLTSKLFSFLALSPSGDIKYAGQLFGQLRSPDSFIWNTIIRGHARGPKPSNALSFFRQ 101

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           ++ +      D H+FP ++ ACA + S E+G+  HA+A+ FG  SDV V N L+QMYA  
Sbjct: 102 MVAAGV--PADHHSFPFVMTACARLQSPEMGMRYHAEALKFGFDSDVFVMNSLIQMYACF 159

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           GL + AR +F+     D    N+M+ G +K G FEEA   F+
Sbjct: 160 GLFQDARKLFEENPLRDVVMWNIMIRGFVKKGEFEEAFACFE 201



 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           D FV + ++   A    G    AR LF + P  D  + NI+IR +        A   +  
Sbjct: 145 DVFVMNSLIQMYACF--GLFQDARKLFEENPLRDVVMWNIMIRGFVKKGEFEEAFACFED 202

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFG-LGSDVSVQNFLVQMYAA 358
           +  S  +  PD+ T   LL AC++VG +  G  +H+ +   G L  +V ++N ++ MY  
Sbjct: 203 MFHSPNVS-PDSVTMISLLSACSQVGDLARGRWLHSYSKELGFLNVNVQLRNSILDMYCK 261

Query: 359 CGLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMF 484
           C  + +A+ VFD + E D  S   M+ G+   G F EA ++F
Sbjct: 262 CRDLSSAKDVFDEMPERDLLSWTSMICGLSNSGNFREALELF 303



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/143 (28%), Positives = 73/143 (51%)
 Frame = +2

Query: 59  LPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPLLL 238
           L  A+ +F ++P  D      +I   ++S N   AL+ + Q +Q+  ++ PD      +L
Sbjct: 265 LSSAKDVFDEMPERDLLSWTSMICGLSNSGNFREALELFVQ-MQNEGIQ-PDKVVLGTML 322

Query: 239 RACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYDDA 418
             CA +G+++ G  VH   V + +  DV +   LV MYA CG +  A  VF  I+E +  
Sbjct: 323 SVCANMGALDQGNYVHRLIVRYNIIHDVVLNTALVDMYAKCGRVDLAFQVFRKIKEKNCF 382

Query: 419 SQNVMLNGMLKCGCFEEARKMFD 487
           + N ++ G+   G  + A ++F+
Sbjct: 383 TWNALIGGLAIHGHCQLALELFE 405


>ref|XP_010248175.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
           [Nelumbo nucifera]
          Length = 629

 Score =  130 bits (326), Expect = 5e-32
 Identities = 73/164 (44%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGS--LPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFY 175
           D F +SR++AF      G+  L YA+ +FSQI NP+ FI N ++R Y+ S NP ++ QFY
Sbjct: 54  DLFAASRLIAFCTNPTYGTSFLDYAQRIFSQIQNPNLFIYNAMVRVYSGSKNPQQSFQFY 113

Query: 176 AQILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYA 355
            ++ Q   L  PD  TFP L+++CAE G V +G+    Q +  G  SDV VQN LV MYA
Sbjct: 114 RKLQQEGLL--PDNLTFPYLVKSCAEFGCVGMGIQALGQIIKHGFESDVYVQNSLVHMYA 171

Query: 356 ACGLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
            CG I  A  +F GI   D  S   M+ G  KCG  E AR++FD
Sbjct: 172 TCGDIGTANRIFRGIYHLDVVSWTSMIAGYNKCGDVESARRLFD 215



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/144 (27%), Positives = 74/144 (51%)
 Frame = +2

Query: 53  GSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPL 232
           G +  AR LF ++P  +    +I+I  Y  + +  +A++ + Q+LQS  ++  +      
Sbjct: 205 GDVESARRLFDKMPERNLVTWSIMINGYVRNHHFNKAIELF-QVLQSEGVQANET-VMVS 262

Query: 233 LLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYD 412
           ++ ACA +G++E G   H   +   L  ++ +   LV MYA CG I+ A  VF+ + E D
Sbjct: 263 VIAACAHLGALEQGEKAHNYVLRHKLNVNLILGTALVDMYARCGSIQKAIRVFEELPERD 322

Query: 413 DASQNVMLNGMLKCGCFEEARKMF 484
             S   ++ G+   G  ++A + F
Sbjct: 323 TLSWTAVIAGLAMHGHADKALEYF 346


>ref|XP_011626440.2| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Amborella trichopoda]
          Length = 554

 Score =  127 bits (320), Expect = 2e-31
 Identities = 68/162 (41%), Positives = 98/162 (60%)
 Frame = +2

Query: 2   DNFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQ 181
           D   +S++LAF A SPSGS+PYA  LF+QI +P+ FI N LIR ++ S  P  AL F+ +
Sbjct: 59  DPIAASQLLAFCATSPSGSMPYALSLFAQIDHPNSFIYNTLIRGHSLSSTPQNALCFFQR 118

Query: 182 ILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAAC 361
           +L S  +   D  T+P L +ACA++ +   G  +H Q + FGL  D  +QN ++  YA+ 
Sbjct: 119 MLDSSDICL-DRRTYPSLFQACAQLSAFVEGAQLHGQVIKFGLDPDAFIQNTIIHFYASL 177

Query: 362 GLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           GL+R AR +F      D  S N ++ G  K G  EEAR++FD
Sbjct: 178 GLLRTARQIFRRSSNRDVVSWNSLIVGCAKWGLLEEARQLFD 219



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 42/144 (29%), Positives = 69/144 (47%)
 Frame = +2

Query: 53  GSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPL 232
           G L  AR LF ++P       N +I  Y  +   + AL+ + ++ +  A   P   T   
Sbjct: 209 GLLEEARQLFDEMPVRSTVSWNAMIACYVHNGRFMEALRLFREMQE--ARIEPTVFTMVS 266

Query: 233 LLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYD 412
           LL ACA++G++E G  +H       +G +  +   +V MY+ CG I  A  +F+  Q   
Sbjct: 267 LLSACAQLGALEQGEWIHKYTKQRIIGFNPILFTAIVDMYSKCGNIDKALAIFESGQCKP 326

Query: 413 DASQNVMLNGMLKCGCFEEARKMF 484
            +S N M+ G+   G  +EA  +F
Sbjct: 327 LSSWNSMIAGLAMHGRGKEAIGLF 350


>gb|ABE66133.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 230

 Score =  121 bits (303), Expect = 4e-31
 Identities = 72/167 (43%), Positives = 97/167 (58%), Gaps = 5/167 (2%)
 Frame = +2

Query: 2   DNFVSSRILAFSA-----LSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRAL 166
           D FV+SR+LA          P+  L YA  +FSQI NP+ F+ N+LIR +++   P +A 
Sbjct: 43  DVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAF 102

Query: 167 QFYAQILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQ 346
            FY Q+L+S     PD  TFP L++A +E+  V +G   H+Q V FG  +DV V+N LV 
Sbjct: 103 GFYTQMLKSRIW--PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVH 160

Query: 347 MYAACGLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
           MYA CG I AA  +F  +   D  S   M+ G  KCG  E AR+MFD
Sbjct: 161 MYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207


>ref|XP_008795409.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Phoenix dactylifera]
          Length = 685

 Score =  126 bits (317), Expect = 1e-30
 Identities = 70/161 (43%), Positives = 96/161 (59%)
 Frame = +2

Query: 5   NFVSSRILAFSALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQI 184
           N  +S++L+F A+SPSG L YAR +FSQ+ +PD FI N +IR +A  PNP  AL F+  +
Sbjct: 42  NHFASKLLSFLAVSPSGDLNYARKIFSQLDSPDVFIWNTMIRGHARGPNPSDALSFFDLM 101

Query: 185 LQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACG 364
           + S      D HT+P +L ACA + +  LG+  H + V  GL SDV V N L+Q YA C 
Sbjct: 102 VHSGV--GTDHHTYPFVLTACARLQAPRLGMRFHGETVKAGLESDVFVLNSLIQTYANCR 159

Query: 365 LIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
              AA  +FDG    D  S NVM+ G +  G F++A   F+
Sbjct: 160 CFDAAHKLFDGNPSRDVVSWNVMIRGYVHGGFFQQAFDWFE 200



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = +2

Query: 68  ARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPLLLRAC 247
           A  LF   P+ D    N++IR Y       +A  ++ ++        PDA T   L+ AC
Sbjct: 164 AHKLFDGNPSRDVVSWNVMIRGYVHGGFFQQAFDWFEEMKAKNV--GPDAVTVISLVSAC 221

Query: 248 AEVGSVELGLMVHAQAVTFG-LGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYDDASQ 424
           + +G +E G  +H+ +   G L +++ + N ++ MY  CG + +A   F+ + + D  + 
Sbjct: 222 SRLGDLERGRSLHSYSSELGFLTNNLKLSNAILDMYCKCGDLVSAWKFFNDMDDGDSVTW 281

Query: 425 NVMLNGMLKCGCFEEARKMF 484
             M++G+   G F++A ++F
Sbjct: 282 TTMISGLANSGSFQDALELF 301



 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 38/145 (26%), Positives = 70/145 (48%)
 Frame = +2

Query: 53  GSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPL 232
           G L  A   F+ + + D      +I   A+S +   AL+ +  + +      PD     +
Sbjct: 261 GDLVSAWKFFNDMDDGDSVTWTTMISGLANSGSFQDALELFGLMQRERVW--PDEVVLVI 318

Query: 233 LLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQEYD 412
           +L  CA++G+++ G  VH     + +  DV ++  L  MYA CG +  A  VF+ ++E +
Sbjct: 319 VLLVCAQLGALDQGKYVHLLINRYKVKRDVVLETALADMYAKCGALDFALQVFEKMKERN 378

Query: 413 DASQNVMLNGMLKCGCFEEARKMFD 487
             + N M+ G+   G  E A ++F+
Sbjct: 379 VFTWNAMIGGLAMHGHGERALELFE 403


>ref|XP_010557968.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
           isoform X1 [Tarenaya hassleriana]
          Length = 622

 Score =  126 bits (316), Expect = 1e-30
 Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
 Frame = +2

Query: 2   DNFVSSRILAF---SALSPSGSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQF 172
           D FVSSR+LA    S L  S  L YA  +F+QI +P+ FI N LIR ++S  +P R   F
Sbjct: 46  DVFVSSRLLALCVDSTLKSSDLLDYAYRVFTQIRHPNIFIFNALIRGFSSGEDPSRVFGF 105

Query: 173 YAQILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMY 352
           Y Q+L+S      D  TFP L++ACAE+GSV LG  +HA  V FG  +DV V+N LV MY
Sbjct: 106 YTQMLESGICS--DNITFPFLVKACAELGSVRLGGQIHAHVVQFGFENDVYVENSLVHMY 163

Query: 353 AACGLIRAARIVFDGIQEYDDASQNVMLNGMLKCGCFEEARKMFD 487
             CG + +A  +F  +Q  D  S   M+ G  K G  + ARKMFD
Sbjct: 164 VNCGSVSSADRIFKQMQFRDVVSWTSMVAGYCKRGDIDTARKMFD 208



 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
 Frame = +2

Query: 53  GSLPYARLLFSQIPNPDPFIANILIRAYASSPNPLRALQFYAQILQSLALRRPDAHTFPL 232
           G +  AR +F ++P  +    +++I  Y  +   ++A++ +    +S+  +   A+   +
Sbjct: 198 GDIDTARKMFDEMPERNLVTWSVMINGYVKNNCFVKAIELF----ESMKRKGIQANETVM 253

Query: 233 L--LRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIRAARIVFDGIQE 406
           +  + +CA +G +ELG   H   V   L  +V +   LV MYA CG I  A  VF+ + E
Sbjct: 254 VSVISSCAHLGGLELGEKAHDYVVKNNLTVNVILGTALVDMYARCGNIEKAIRVFEELPE 313

Query: 407 YDDASQNVMLNGMLKCGCFEEARKMF 484
            D  S   +++G+   G   EA   F
Sbjct: 314 KDSLSWTSIISGLAMYGHGNEAIHYF 339