BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00033532
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272070.1| pentatricopeptide repeat-containing protein ...   165   1e-44
gb|ONK63734.1| uncharacterized protein A4U43_C07F18360 [Asparagu...   165   1e-44
ref|XP_004515908.1| PREDICTED: pentatricopeptide repeat-containi...   125   2e-30
gb|OAY75823.1| Pentatricopeptide repeat-containing protein, chlo...   125   2e-30
ref|XP_020112442.1| pentatricopeptide repeat-containing protein ...   123   1e-29
gb|ERN17633.1| hypothetical protein AMTR_s00059p00175950 [Ambore...   117   1e-29
gb|OVA17991.1| Pentatricopeptide repeat [Macleaya cordata]            122   2e-29
dbj|GAU40341.1| hypothetical protein TSUD_154380 [Trifolium subt...   119   2e-29
ref|XP_003628879.1| SLOW growth protein, putative [Medicago trun...   121   4e-29
ref|XP_010256994.1| PREDICTED: putative pentatricopeptide repeat...   121   6e-29
dbj|GAU40342.1| hypothetical protein TSUD_154390 [Trifolium subt...   119   2e-28
dbj|GAV58146.1| PPR domain-containing protein/PPR_2 domain-conta...   119   4e-28
gb|KHN48283.1| Putative pentatricopeptide repeat-containing prot...   118   5e-28
gb|OIW12108.1| hypothetical protein TanjilG_31215 [Lupinus angus...   116   5e-28
gb|OMO54634.1| hypothetical protein CCACVL1_27701 [Corchorus cap...   118   6e-28
ref|XP_003541414.2| PREDICTED: pentatricopeptide repeat-containi...   118   7e-28
ref|XP_017615018.1| PREDICTED: pentatricopeptide repeat-containi...   118   8e-28
gb|PPR86010.1| hypothetical protein GOBAR_AA34679 [Gossypium bar...   117   1e-27
ref|XP_016718519.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-27
gb|PNY05063.1| pentatricopeptide repeat-containing protein mitoc...   117   1e-27

>ref|XP_020272070.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Asparagus officinalis]
          Length = 725

 Score =  165 bits (418), Expect = 1e-44
 Identities = 82/139 (58%), Positives = 98/139 (70%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVARDL 218
           P+ FTFPFLL SC++L  P  GLQVH H+ K G DLD HV++SLI  YC  G+L VAR L
Sbjct: 109 PNNFTFPFLLVSCSKLPGPETGLQVHSHVMKLGFDLDSHVRHSLIGLYCIFGDLDVARYL 168

Query: 219 FDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLG 398
           FDEITRW+   VSFN+MM GY KCG+  D L++F  M+  G+ PD  TF CLMSIC  LG
Sbjct: 169 FDEITRWD--VVSFNVMMSGYNKCGQWDDALRVFGYMLRVGVRPDDRTFGCLMSICSGLG 226

Query: 399 DLRSGKAVHVLALREVGFD 455
           DL  GK VH+LAL+  G D
Sbjct: 227 DLTRGKVVHMLALKSFGSD 245



 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 34/171 (19%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHC-HIKKFGLD-LDVHVKNSLIAFYCHL 191
           +LR G+ PD  TF  L+  C+ L D   G  VH   +K FG D L   VK +L+  Y  L
Sbjct: 203 MLRVGVRPDDRTFGCLMSICSGLGDLTRGKVVHMLALKSFGSDDLGNGVKLALLNMYSKL 262

Query: 192 GELAVA--------------------------------RDLFDEITRWEKNPVSFNIMMR 275
           G + +A                                R +FDE+ +  K+ +S+  M+ 
Sbjct: 263 GAMKMADRVFGSMGSSKSVASWSCMVSGYAKCGKIENARMVFDEMPK--KDLISWTSMIS 320

Query: 276 GYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVHV 428
           GY + GR  + ++++E+M   G+ PD  T V ++S C  LG L  GK +H+
Sbjct: 321 GYSQNGRYKEAVELYEEMGKQGVKPDEVTLVAVLSACAHLGYLDFGKRIHL 371



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
 Frame = +3

Query: 24  RSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLD-VHVKNSLIAFYCHLGEL 200
           + G+ PD  T   +L +C  L     G ++H +I+   +  +   +  +++  Y   G +
Sbjct: 340 KQGVKPDEVTLVAVLSACAHLGYLDFGKRIHLYIESDSIGCNNSRLCTAVVDMYAKCGHI 399

Query: 201 AVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMS 380
             A ++F+ + +  K    FN ++ G  + G     + +FE+M   G+ PD+ TFV ++ 
Sbjct: 400 MTALEIFNRVDKKTKTSHLFNSVISGLAQHGLGERAIAVFEEMEALGLSPDKVTFVGVLC 459

Query: 381 ICKVLGDLRSGKAV 422
            C   G +  GK +
Sbjct: 460 ACSHSGLIEKGKEI 473


>gb|ONK63734.1| uncharacterized protein A4U43_C07F18360 [Asparagus officinalis]
          Length = 747

 Score =  165 bits (418), Expect = 1e-44
 Identities = 82/139 (58%), Positives = 98/139 (70%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVARDL 218
           P+ FTFPFLL SC++L  P  GLQVH H+ K G DLD HV++SLI  YC  G+L VAR L
Sbjct: 131 PNNFTFPFLLVSCSKLPGPETGLQVHSHVMKLGFDLDSHVRHSLIGLYCIFGDLDVARYL 190

Query: 219 FDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLG 398
           FDEITRW+   VSFN+MM GY KCG+  D L++F  M+  G+ PD  TF CLMSIC  LG
Sbjct: 191 FDEITRWD--VVSFNVMMSGYNKCGQWDDALRVFGYMLRVGVRPDDRTFGCLMSICSGLG 248

Query: 399 DLRSGKAVHVLALREVGFD 455
           DL  GK VH+LAL+  G D
Sbjct: 249 DLTRGKVVHMLALKSFGSD 267



 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 34/171 (19%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHC-HIKKFGLD-LDVHVKNSLIAFYCHL 191
           +LR G+ PD  TF  L+  C+ L D   G  VH   +K FG D L   VK +L+  Y  L
Sbjct: 225 MLRVGVRPDDRTFGCLMSICSGLGDLTRGKVVHMLALKSFGSDDLGNGVKLALLNMYSKL 284

Query: 192 GELAVA--------------------------------RDLFDEITRWEKNPVSFNIMMR 275
           G + +A                                R +FDE+ +  K+ +S+  M+ 
Sbjct: 285 GAMKMADRVFGSMGSSKSVASWSCMVSGYAKCGKIENARMVFDEMPK--KDLISWTSMIS 342

Query: 276 GYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVHV 428
           GY + GR  + ++++E+M   G+ PD  T V ++S C  LG L  GK +H+
Sbjct: 343 GYSQNGRYKEAVELYEEMGKQGVKPDEVTLVAVLSACAHLGYLDFGKRIHL 393



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
 Frame = +3

Query: 24  RSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLD-VHVKNSLIAFYCHLGEL 200
           + G+ PD  T   +L +C  L     G ++H +I+   +  +   +  +++  Y   G +
Sbjct: 362 KQGVKPDEVTLVAVLSACAHLGYLDFGKRIHLYIESDSIGCNNSRLCTAVVDMYAKCGHI 421

Query: 201 AVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMS 380
             A ++F+ + +  K    FN ++ G  + G     + +FE+M   G+ PD+ TFV ++ 
Sbjct: 422 MTALEIFNRVDKKTKTSHLFNSVISGLAQHGLGERAIAVFEEMEALGLSPDKVTFVGVLC 481

Query: 381 ICKVLGDLRSGKAV 422
            C   G +  GK +
Sbjct: 482 ACSHSGLIEKGKEI 495


>ref|XP_004515908.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cicer arietinum]
          Length = 644

 Score =  125 bits (314), Expect = 2e-30
 Identities = 67/146 (45%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTR--LSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHL 191
           +L S   PD FTFPFLL+SC    +S P  GLQVHCH+ K G++ DV V N+L+ +YC  
Sbjct: 108 MLSSSSSPDTFTFPFLLKSCANSSISGPKLGLQVHCHVAKNGVESDVFVNNALLKYYCVF 167

Query: 192 GELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVC 371
           G+   A  LF+E     ++ VSFN M+ G+V+ G      ++F +M G  I PD +TFV 
Sbjct: 168 GDAHDAYKLFEESP--VRDCVSFNTMINGFVRAGFVSCCFRVFGEMRGFCIQPDEYTFVA 225

Query: 372 LMSICKVLGDLRSGKAVHVLALREVG 449
           L+S C +L DLR G+ VH L  RE+G
Sbjct: 226 LLSACSLLEDLRIGRQVHGLVYRELG 251



 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 35/166 (21%)
 Frame = +3

Query: 33  LYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK----FGLDL-------DVHVK------ 161
           + PD +TF  LL +C+ L D   G QVH  + +    FG ++       +++ K      
Sbjct: 216 IQPDEYTFVALLSACSLLEDLRIGRQVHGLVYRELGCFGDNVLLVNALVNMYAKCGCLVM 275

Query: 162 ------------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVK 287
                              SL++ Y   GE+ VAR LFD++   E++ VS+  M+ GY  
Sbjct: 276 AERVASGVRIGKSVVAAWTSLVSAYALRGEVEVARRLFDQMG--ERDVVSWTAMISGYSH 333

Query: 288 CGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
            G   + L++F  + G G+ PD    V  +S C  LG L  G+ +H
Sbjct: 334 AGCFQEALELFVQLEGLGMKPDEVAVVNALSACARLGALELGRRIH 379


>gb|OAY75823.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
           comosus]
          Length = 815

 Score =  125 bits (314), Expect = 2e-30
 Identities = 61/141 (43%), Positives = 86/141 (60%)
 Frame = +3

Query: 33  LYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVAR 212
           L  + FTF FL+ +C +L  P  G  VHCH+ K G   D +V NSL+  Y   G++  AR
Sbjct: 102 LIANNFTFTFLVNACAKLPSPDVGFGVHCHVVKCGFHSDTYVMNSLMHLYSSFGDMPCAR 161

Query: 213 DLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKV 392
            +FD  +  +++ VSFN MM GY K G A +GL +F+ M+ S   PD  TF  ++S+C  
Sbjct: 162 KVFDACS--QRDAVSFNTMMDGYAKAGEAVNGLSVFKQMLDSDSKPDSSTFASVLSLCSE 219

Query: 393 LGDLRSGKAVHVLALREVGFD 455
           LGD R+GK VH+LA + +G D
Sbjct: 220 LGDARTGKMVHLLAYKTIGSD 240



 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
 Frame = +3

Query: 15  RLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK--------------------- 131
           ++L S   PD  TF  +L  C+ L D   G  VH    K                     
Sbjct: 197 QMLDSDSKPDSSTFASVLSLCSELGDARTGKMVHLLAYKTIGSDKFSNYIVTALVDMYSR 256

Query: 132 -------------FGLDLDVHVKNSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMM 272
                         G   DV   +SL++ Y   G++  AR LF E+   +K+ +++  ++
Sbjct: 257 CGMMRLANQAFRMMGDSADVKAWSSLVSGYARCGDIGTARKLFSEMP--QKDLIAWTALI 314

Query: 273 RGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
            G  + G+  + L+IF +M   G+ PD  T V ++S C  LG L  GK +H
Sbjct: 315 SGCARSGKYREALEIFMEMEKEGLRPDEVTMVTVLSACAQLGALDLGKKLH 365


>ref|XP_020112442.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Ananas comosus]
          Length = 716

 Score =  123 bits (309), Expect = 1e-29
 Identities = 59/141 (41%), Positives = 86/141 (60%)
 Frame = +3

Query: 33  LYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVAR 212
           L  + FTF F++ +C +L  P  G  VHCH+ K G   D +V NSL+  Y   G++  +R
Sbjct: 102 LIANNFTFTFIVNACAKLPSPDVGFGVHCHVVKCGFHSDTYVMNSLMHLYSSFGDMPCSR 161

Query: 213 DLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKV 392
            +FD  +  +++ VSFN MM GY K G A +GL +F+ M+ S   PD  TF  ++S+C  
Sbjct: 162 KVFDACS--QRDAVSFNTMMDGYAKAGEAVNGLSVFKQMLDSDSKPDSSTFASVLSLCSE 219

Query: 393 LGDLRSGKAVHVLALREVGFD 455
           LGD R+GK VH+LA + +G D
Sbjct: 220 LGDARTGKMVHLLAYKTIGSD 240



 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
 Frame = +3

Query: 15  RLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK--------------------- 131
           ++L S   PD  TF  +L  C+ L D   G  VH    K                     
Sbjct: 197 QMLDSDSKPDSSTFASVLSLCSELGDARTGKMVHLLAYKTIGSDKFSNYIVTALVDMYSR 256

Query: 132 -------------FGLDLDVHVKNSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMM 272
                         G   DV   +SL++ Y   G++  AR LF E+   +K+ +++  ++
Sbjct: 257 CGMMRLANQAFRMMGDSADVKAWSSLVSGYARCGDIGTARKLFSEMP--QKDLIAWTALI 314

Query: 273 RGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
            G  + G+  + L+IF +M   G+ PD  T V ++S C  LG L  GK +H
Sbjct: 315 SGCARSGKYREALEIFMEMEKEGLRPDEVTMVTVLSACAQLGALDLGKKLH 365


>gb|ERN17633.1| hypothetical protein AMTR_s00059p00175950 [Amborella trichopoda]
          Length = 236

 Score =  117 bits (293), Expect = 1e-29
 Identities = 59/141 (41%), Positives = 85/141 (60%)
 Frame = +3

Query: 3   FRSSRLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFY 182
           F   ++L  GL+P+ FTFPF+L++CT+LS    G  VH HI K G    + V+N+L+  Y
Sbjct: 74  FLYKQMLNQGLFPNNFTFPFVLKACTQLSSIREGKIVHTHITKLGFTCQIVVQNALLHTY 133

Query: 183 CHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHT 362
              G + +AR LFDEIT   KN +S+N M+ GY + G     L+ F +M   GI PD  T
Sbjct: 134 VASGSIPLARQLFDEIT--HKNIISWNSMIGGYSQQGHVDKALEFFTEMENLGIEPDEIT 191

Query: 363 FVCLMSICKVLGDLRSGKAVH 425
            V ++S+C   GDL  G+++H
Sbjct: 192 IVSMLSVCSQTGDLEFGRSLH 212


>gb|OVA17991.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 729

 Score =  122 bits (307), Expect = 2e-29
 Identities = 63/139 (45%), Positives = 85/139 (61%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVARDL 218
           P+ FTFPFLL SC +LS    G ++H HI K G D D+ ++NSLI  Y    EL  A  L
Sbjct: 116 PNNFTFPFLLNSCAKLSCIESGKEIHSHIIKNGFDSDLFIRNSLIHLYSTFRELDYACTL 175

Query: 219 FDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLG 398
           FDE    +++ VSFN M+ GY + G+  D L +F +M   GIGPD  T V L+S C  LG
Sbjct: 176 FDESP--DRDLVSFNTMINGYARGGQPSDALHLFGEMRVFGIGPDEFTIVALLSACSSLG 233

Query: 399 DLRSGKAVHVLALREVGFD 455
           D ++GK +H+L  + + FD
Sbjct: 234 DRKTGKQIHLLVYKNLNFD 252



 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 34/166 (20%)
 Frame = +3

Query: 30  GLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHI-KKFGLD----------LDVHVK----- 161
           G+ PD FT   LL +C+ L D   G Q+H  + K    D          +D++ K     
Sbjct: 214 GIGPDEFTIVALLSACSSLGDRKTGKQIHLLVYKNLNFDGSNVLLKTALIDMYAKCGLME 273

Query: 162 ------------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVK 287
                             +S+I+ Y   GE+ +A+ +F+++   E++ VS+  M+ GY +
Sbjct: 274 MADRVFSNMGTHKSTAAWSSMISGYVRSGEIEIAQKIFNQMG--ERDLVSWTAMISGYAQ 331

Query: 288 CGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
            G+  + L++F +M   GI PD  T   ++S C  LG L  GK +H
Sbjct: 332 MGKYNEALELFVEMENFGIKPDEVTLATVLSACARLGALDFGKRLH 377


>dbj|GAU40341.1| hypothetical protein TSUD_154380 [Trifolium subterraneum]
          Length = 327

 Score =  119 bits (297), Expect = 2e-29
 Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRL---SDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCH 188
           +L S + PD FTFPFLL+SC  +   S P  G QVHCH+ + G D DV V N+L+ FYC 
Sbjct: 79  MLSSSISPDSFTFPFLLKSCANMLISSTPQLGFQVHCHVIRNGFDSDVFVNNALLNFYCV 138

Query: 189 LGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFV 368
            G++  A  +F+E     ++ VS N M+ G+V+ G      ++F +M    I PD +TFV
Sbjct: 139 FGDVDNAYKVFEESP--VRDCVSCNTMINGFVRAGVLSCCFRVFGEMRRFSIRPDEYTFV 196

Query: 369 CLMSICKVLGDLRSGKAVHVLALREVGF 452
            L+S C +L D R G+ VH L  RE+G+
Sbjct: 197 ALLSCCSLLEDYRIGRQVHGLVYRELGY 224


>ref|XP_003628879.1| SLOW growth protein, putative [Medicago truncatula]
 gb|AET03355.1| SLOW growth protein, putative [Medicago truncatula]
          Length = 633

 Score =  121 bits (304), Expect = 4e-29
 Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTR--LSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHL 191
           +L S + PD FTFPFLL++C    +S P  G QVHCH+ + G   DV V N+L+ FYC  
Sbjct: 107 MLNSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGF 166

Query: 192 GELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVC 371
           G++  A  +FDE   + ++ VSFN M+ G+ + G      ++F +M G  + PD +TFV 
Sbjct: 167 GDVVNAYKVFDE--SFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVA 224

Query: 372 LMSICKVLGDLRSGKAVHVLALREVG 449
           L+S C VL D R G+ VH L  RE+G
Sbjct: 225 LLSGCSVLEDYRIGRQVHGLVYRELG 250



 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK----FGLDL-------DVHVK-------- 161
           PD +TF  LL  C+ L D   G QVH  + +    FG ++       D++ K        
Sbjct: 217 PDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAE 276

Query: 162 ----------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCG 293
                            SL++ Y   GE+ VAR LFD++   E++ VS+  M+ GY   G
Sbjct: 277 TVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMG--ERDVVSWTAMISGYSHAG 334

Query: 294 RAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
              + L++F  + G G+ PD    V  +S C  LG L  G+ +H
Sbjct: 335 CFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIH 378


>ref|XP_010256994.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820 [Nelumbo nucifera]
 ref|XP_010256996.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820 [Nelumbo nucifera]
          Length = 688

 Score =  121 bits (303), Expect = 6e-29
 Identities = 58/144 (40%), Positives = 93/144 (64%)
 Frame = +3

Query: 24  RSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELA 203
           R GL+P+ FTFPF+L++C RLSD   G+++H H+ K G D DV+VK SL+  Y   G + 
Sbjct: 107 REGLFPNNFTFPFVLKACARLSDLELGIKIHTHVLKAGFDYDVYVKTSLVCLYAKCGCVG 166

Query: 204 VARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSI 383
            A  +FDE+   +KN VS+  ++ GY+  G  G+ + +F+ ++  G+ PD  T V ++S 
Sbjct: 167 NAHKVFDEMP--DKNVVSWTAIISGYIDFGNFGEAVVMFQKLLEMGLKPDSFTLVRVLSA 224

Query: 384 CKVLGDLRSGKAVHVLALREVGFD 455
           C  LGD+++G+ +H   +RE+G D
Sbjct: 225 CSQLGDVKNGEWIH-RYIREMGMD 247



 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 46/133 (34%), Positives = 72/133 (54%)
 Frame = +3

Query: 15  RLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLG 194
           +LL  GL PD FT   +L +C++L D   G  +H +I++ G+D +V V  SL+  Y   G
Sbjct: 205 KLLEMGLKPDSFTLVRVLSACSQLGDVKNGEWIHRYIREMGMDRNVFVATSLVDMYTKCG 264

Query: 195 ELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCL 374
            +  AR +FD +   EK+ VS++ M+ GY   G   + +++F  M    + PD  T V +
Sbjct: 265 SMEKARSVFDGM--HEKDTVSWSAMIAGYAMNGVPKEAVELFFQMQRENVKPDCFTMVGI 322

Query: 375 MSICKVLGDLRSG 413
           +S C  LG    G
Sbjct: 323 LSACAQLGAFELG 335



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/133 (31%), Positives = 64/133 (48%)
 Frame = +3

Query: 63  LLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVARDLFDEITRWE 242
           LL+ C    +      VH  + +FGLD D ++ N ++      GE   AR +F + TR E
Sbjct: 22  LLQGCNNFKELK---HVHARLLRFGLDQDNYLVNMILKSCLESGETQHARLVFSQ-TR-E 76

Query: 243 KNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAV 422
            N   +N M+RG+V      D ++ +  M   G+ P+  TF  ++  C  L DL  G  +
Sbjct: 77  PNIFLWNTMIRGFVSNDCLYDAIKFYGLMRREGLFPNNFTFPFVLKACARLSDLELGIKI 136

Query: 423 HVLALREVGFDVD 461
           H   L+  GFD D
Sbjct: 137 HTHVLK-AGFDYD 148


>dbj|GAU40342.1| hypothetical protein TSUD_154390 [Trifolium subterraneum]
          Length = 538

 Score =  119 bits (297), Expect = 2e-28
 Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRL---SDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCH 188
           +L S + PD FTFPFLL+SC  +   S P  G QVHCH+ + G D DV V N+L+ FYC 
Sbjct: 1   MLSSSISPDSFTFPFLLKSCANMLISSTPQLGFQVHCHVIRNGFDSDVFVNNALLNFYCV 60

Query: 189 LGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFV 368
            G++  A  +F+E     ++ VS N M+ G+V+ G      ++F +M    I PD +TFV
Sbjct: 61  FGDVDNAYKVFEESP--VRDCVSCNTMINGFVRAGVLSCCFRVFGEMRRFSIRPDEYTFV 118

Query: 369 CLMSICKVLGDLRSGKAVHVLALREVGF 452
            L+S C +L D R G+ VH L  RE+G+
Sbjct: 119 ALLSCCSLLEDYRIGRQVHGLVYRELGY 146



 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 35/169 (20%)
 Frame = +3

Query: 24  RSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK----FGLDL-------DVHVK--- 161
           R  + PD +TF  LL  C+ L D   G QVH  + +    FG ++       D++ K   
Sbjct: 107 RFSIRPDEYTFVALLSCCSLLEDYRIGRQVHGLVYRELGYFGENVLLVNKIVDMYAKCGY 166

Query: 162 ---------------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRG 278
                                 SL++ Y   GE+ VAR LF+++   E++ VS+  M+ G
Sbjct: 167 LDMAERVVRGVKGWKGVVEAWTSLVSAYALRGEVEVARRLFEQMG--ERDVVSWTAMISG 224

Query: 279 YVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
           Y   G   + L++F  + G G+ PD    V  +S C  LG L  GK +H
Sbjct: 225 YSHAGCFQEALELFVQLEGLGMKPDEVAVVAALSACARLGALELGKRIH 273


>dbj|GAV58146.1| PPR domain-containing protein/PPR_2 domain-containing protein
           [Cephalotus follicularis]
          Length = 636

 Score =  119 bits (297), Expect = 4e-28
 Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVARDL 218
           P+ FTFPF+L +C RL+   PG Q+HCH+ KFG ++D+ VKN+LI FY   G L  AR +
Sbjct: 102 PNNFTFPFVLNACARLTSLEPGFQIHCHVIKFGFEMDLFVKNALIHFYSVFGHLDNARYI 161

Query: 219 FDEITRWEKNPVSFNIMMRGYV-KCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVL 395
           F+      K+ VS+N M+ GY  +  +    L +F DM   GI PD  TFV L+S C V+
Sbjct: 162 FE--ASLVKDVVSYNTMLNGYAHQVKQPHAALLLFRDMQDFGIQPDEFTFVALLSTCSVM 219

Query: 396 GDLRSGKAVHVLALREVG 449
            D   GK +H L  +++G
Sbjct: 220 NDPNIGKQIHALTYKKLG 237



 Score = 75.5 bits (184), Expect = 6e-13
 Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 33/165 (20%)
 Frame = +3

Query: 30  GLYPDRFTFPFLLRSCTRLSDPYPGLQVHC-HIKKFGLD----------LDVHVK----- 161
           G+ PD FTF  LL +C+ ++DP  G Q+H    KK G            LD++ K     
Sbjct: 201 GIQPDEFTFVALLSTCSVMNDPNIGKQIHALTYKKLGAVELNVLLTSAILDMYTKCGLMN 260

Query: 162 -----------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKC 290
                            +S+++ Y   G+  +AR LFD +   E++ VS+  M+ GY + 
Sbjct: 261 IAACVFSTMRSAGTAAWSSMVSGYAQCGDTKMARCLFDRMD--ERDIVSWTAMISGYSQA 318

Query: 291 GRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
           G+  + L++F  M   GI PD  T V ++S C  LG L  GK +H
Sbjct: 319 GQCNEALELFVQMERLGIKPDEVTLVSVLSACAGLGALDYGKRLH 363


>gb|KHN48283.1| Putative pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 545

 Score =  118 bits (295), Expect = 5e-28
 Identities = 61/139 (43%), Positives = 88/139 (63%)
 Frame = +3

Query: 33  LYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVAR 212
           ++PD FTFPFLL+SC +LS P  GLQVH H+ K G + +V V N+L+  Y   G+   A 
Sbjct: 8   IFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNAC 67

Query: 213 DLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKV 392
            +FDE     ++ VS+N ++ G V+ GRAG  ++IF +M G  + PD +TFV L+S C +
Sbjct: 68  RVFDESP--VRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSL 125

Query: 393 LGDLRSGKAVHVLALREVG 449
           L D   G+ VH L  R++G
Sbjct: 126 LEDRGIGRVVHGLVYRKLG 144



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 34/163 (20%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK----FGLD-------LDVHVK-------- 161
           PD +TF  LL +C+ L D   G  VH  + +    FG +       +D++ K        
Sbjct: 111 PDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAE 170

Query: 162 ---------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGR 296
                           SL++ Y   GE+ VAR LFD++   E++ VS+  M+ GY   G 
Sbjct: 171 RVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMG--ERDVVSWTAMISGYCHAGC 228

Query: 297 AGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
             + L++F ++   G+ PD    V  +S C  LG L  G+ +H
Sbjct: 229 FQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRIH 271


>gb|OIW12108.1| hypothetical protein TanjilG_31215 [Lupinus angustifolius]
          Length = 405

 Score =  116 bits (291), Expect = 5e-28
 Identities = 60/143 (41%), Positives = 87/143 (60%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGE 197
           +L S  YPD FTFP+LL+SC RL     G+QVHCH+ K GL+ DV V NSL+  YC  G+
Sbjct: 1   MLASPTYPDSFTFPYLLKSCVRLFSLKLGIQVHCHVVKNGLESDVFVMNSLLNLYCVFGD 60

Query: 198 LAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLM 377
              A  +FD      ++ VS+N ++ G+V+ G     +++F +M    + PD +TFV L+
Sbjct: 61  TRNASKVFDGSP--VRDLVSYNTLINGFVEAGLVSCSMRLFGEMRRFCVEPDGYTFVALL 118

Query: 378 SICKVLGDLRSGKAVHVLALREV 446
           S C  L D  +GK VH LA +++
Sbjct: 119 SACSSLEDCETGKKVHCLAYKKL 141



 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 36/165 (21%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHC--------------------------------- 119
           PD +TF  LL +C+ L D   G +VHC                                 
Sbjct: 109 PDGYTFVALLSACSSLEDCETGKKVHCLAYKKLDSLGSNALLMNALVDMYAKCGCLEMAK 168

Query: 120 HIKKFGLDL---DVHVKNSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKC 290
            +   G+ +   DV    S+++ Y   GE+ VAR +FD++   E++ VS+  M+ GY   
Sbjct: 169 RVLMSGIRIGKSDVAAWTSVMSAYARCGEVDVARRIFDQME--ERDVVSWTAMINGYSCA 226

Query: 291 GRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
           G   + L++F  +   G+ PD    +  +S C  LG L SG+ +H
Sbjct: 227 GHFEEALELFLKLEDLGMEPDVVAVIAALSACARLGALESGRRIH 271


>gb|OMO54634.1| hypothetical protein CCACVL1_27701 [Corchorus capsularis]
          Length = 843

 Score =  118 bits (296), Expect = 6e-28
 Identities = 60/135 (44%), Positives = 87/135 (64%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGE 197
           +L  G+ PD++TFPFLL +CT++S    G QVH  + K GL  DV + NSLI FY   GE
Sbjct: 128 MLSLGISPDKYTFPFLLSACTKISAHSEGFQVHGSLVKMGLQGDVFILNSLIHFYAECGE 187

Query: 198 LAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLM 377
           + +AR +FD +T  E+N VS+  ++ GY +CG A + +++F +MV  GI P+  T VC++
Sbjct: 188 IVLARKVFDAMT--ERNVVSWTSLICGYARCGLAKEAVELFFEMVEKGIMPNSVTMVCVI 245

Query: 378 SICKVLGDLRSGKAV 422
           S C  L DL  G+ V
Sbjct: 246 SACGKLKDLELGETV 260



 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 42/141 (29%), Positives = 72/141 (51%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGE 197
           ++  G+ P+  T   ++ +C +L D   G  V  +I + G+ ++  + N+L+  Y   G 
Sbjct: 229 MVEKGIMPNSVTMVCVISACGKLKDLELGETVRGYIGQLGVKVNTLMVNALVDMYMKCGA 288

Query: 198 LAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLM 377
              A+ LFDE    EKN V +N +M  YV+ G + + L I ++M+   + PDR T +  +
Sbjct: 289 FDTAKQLFDESA--EKNLVVYNTIMSNYVREGMSREALNILDEMLVKRLAPDRVTMLSAI 346

Query: 378 SICKVLGDLRSGKAVHVLALR 440
           S C  L  +  G+  H   LR
Sbjct: 347 SACAQLSSVFWGRCCHGYVLR 367


>ref|XP_003541414.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Glycine max]
 gb|KRH19885.1| hypothetical protein GLYMA_13G141400 [Glycine max]
          Length = 636

 Score =  118 bits (295), Expect = 7e-28
 Identities = 61/139 (43%), Positives = 88/139 (63%)
 Frame = +3

Query: 33  LYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCHLGELAVAR 212
           ++PD FTFPFLL+SC +LS P  GLQVH H+ K G + +V V N+L+  Y   G+   A 
Sbjct: 99  IFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNAC 158

Query: 213 DLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKV 392
            +FDE     ++ VS+N ++ G V+ GRAG  ++IF +M G  + PD +TFV L+S C +
Sbjct: 159 RVFDESP--VRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSL 216

Query: 393 LGDLRSGKAVHVLALREVG 449
           L D   G+ VH L  R++G
Sbjct: 217 LEDRGIGRVVHGLVYRKLG 235



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 34/163 (20%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK----FGLD-------LDVHVK-------- 161
           PD +TF  LL +C+ L D   G  VH  + +    FG +       +D++ K        
Sbjct: 202 PDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAE 261

Query: 162 ---------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGR 296
                           SL++ Y   GE+ VAR LFD++   E++ VS+  M+ GY   G 
Sbjct: 262 RVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMG--ERDVVSWTAMISGYCHAGC 319

Query: 297 AGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
             + L++F ++   G+ PD    V  +S C  LG L  G+ +H
Sbjct: 320 FQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRIH 362


>ref|XP_017615018.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Gossypium arboreum]
          Length = 719

 Score =  118 bits (295), Expect = 8e-28
 Identities = 68/148 (45%), Positives = 86/148 (58%)
 Frame = +3

Query: 3   FRSSRLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFY 182
           F SS L +    P+ FTFPFLL SC RLS   PG+QVH HI KFG DLD++V N+L+ FY
Sbjct: 94  FYSSMLHQVNQSPNNFTFPFLLNSCARLSTLKPGIQVHSHIIKFGFDLDLYVGNALMHFY 153

Query: 183 CHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHT 362
                L  AR +F+      ++ VS+N M+ GY   GR G  L++F  M  SGI PD  T
Sbjct: 154 SVFKHLNDARIVFE--GSLVRDLVSYNTMINGYGLVGRPGPALRLFRKMQESGIVPDEFT 211

Query: 363 FVCLMSICKVLGDLRSGKAVHVLALREV 446
           FV L+S    L D R GK +H    R +
Sbjct: 212 FVALLSAFSSLDDSRIGKQIHGFVYRNL 239



 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 34/171 (19%)
 Frame = +3

Query: 15  RLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKF-----------GLDLDVHVK 161
           ++  SG+ PD FTF  LL + + L D   G Q+H  + +               LD++ K
Sbjct: 199 KMQESGIVPDEFTFVALLSAFSSLDDSRIGKQIHGFVYRNLSCVDSNGLLKAAILDMYAK 258

Query: 162 N-----------------------SLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMM 272
           +                       S+I+ Y   GE A AR +FD++   +++ + +  M+
Sbjct: 259 SGLMDLADRVFSSMASNKSTAAWSSMISGYARRGETAAARRMFDQMD--QRDLICWTAMI 316

Query: 273 RGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
            GY + G+  + L++F  M   GI PD  T   ++S C  LG L  G+ +H
Sbjct: 317 SGYSQSGQYSEALELFAQMEYLGIRPDECTMAAVLSACAGLGALSLGERLH 367


>gb|PPR86010.1| hypothetical protein GOBAR_AA34679 [Gossypium barbadense]
          Length = 661

 Score =  117 bits (294), Expect = 1e-27
 Identities = 68/146 (46%), Positives = 85/146 (58%)
 Frame = +3

Query: 3   FRSSRLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFY 182
           F SS L +    P+ FTFPFLL SC RLS   PG+QVH HI KFG DLD++V N+L+ FY
Sbjct: 94  FYSSMLHQVNQSPNNFTFPFLLNSCARLSTLKPGIQVHSHIIKFGFDLDLYVGNALMHFY 153

Query: 183 CHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHT 362
                L  AR +F+      ++ VS+N M+ GY   GR G  L++F  M  SGI PD  T
Sbjct: 154 SVFKHLNDARIVFE--GSLVRDLVSYNTMINGYGLVGRPGPALRLFRKMQESGIVPDEFT 211

Query: 363 FVCLMSICKVLGDLRSGKAVHVLALR 440
           FV L+S    L D R GK +H    R
Sbjct: 212 FVALLSAFSSLDDSRIGKQIHGFVYR 237



 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
 Frame = +3

Query: 15  RLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVH------------V 158
           ++  SG+ PD FTF  LL + + L D   G Q+H  + +    +D +             
Sbjct: 199 KMQESGIVPDEFTFVALLSAFSSLDDSRIGKQIHGFVYRNPSCVDSNGLLKAAILDITAA 258

Query: 159 KNSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGS 338
            +S+I+ Y   GE A AR +FD++ R  ++ + +  M+ GY + G+  + L++F  M   
Sbjct: 259 WSSMISGYARRGETAAARRMFDQMDR--RDLICWTAMISGYSQSGQYSEALELFAQMEYL 316

Query: 339 GIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
           GI PD  T   ++S C  LG L  G+ +H
Sbjct: 317 GIRPDECTMAAVLSACAGLGALSLGERLH 345


>ref|XP_016718519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Gossypium hirsutum]
          Length = 719

 Score =  117 bits (294), Expect = 1e-27
 Identities = 68/146 (46%), Positives = 85/146 (58%)
 Frame = +3

Query: 3   FRSSRLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFY 182
           F SS L +    P+ FTFPFLL SC RLS   PG+QVH HI KFG DLD++V N+L+ FY
Sbjct: 94  FYSSMLHQVNQSPNNFTFPFLLNSCARLSTLKPGIQVHSHIIKFGFDLDLYVGNALMHFY 153

Query: 183 CHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHT 362
                L  AR +F+      ++ VS+N M+ GY   GR G  L++F  M  SGI PD  T
Sbjct: 154 SVFKHLNDARIVFE--GSLVRDLVSYNTMINGYGLVGRPGPALRLFRKMQESGIVPDEFT 211

Query: 363 FVCLMSICKVLGDLRSGKAVHVLALR 440
           FV L+S    L D R GK +H    R
Sbjct: 212 FVALLSAFSSLDDSRIGKQIHGFVYR 237



 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 34/171 (19%)
 Frame = +3

Query: 15  RLLRSGLYPDRFTFPFLLRSCTRLSDPYPGLQVHCHIKKF-----------GLDLDVHVK 161
           ++  SG+ PD FTF  LL + + L D   G Q+H  + +               LD++ K
Sbjct: 199 KMQESGIVPDEFTFVALLSAFSSLDDSRIGKQIHGFVYRNPSCVDSNGLLKAAILDMYAK 258

Query: 162 N-----------------------SLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMM 272
           +                       S+I+ Y   GE A AR +FD++ R  ++ + +  M+
Sbjct: 259 SGLMDLADRVFSSMASNKSTAAWSSMISGYARRGETAAARRMFDQMDR--RDLICWTAMI 316

Query: 273 RGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
            GY + G+  + L++F  M   GI PD  T   ++S C  LG L  G+ +H
Sbjct: 317 SGYSQSGQYSEALELFAQMEYLGIRPDECTMAAVLSACAGLGALSLGERLH 367


>gb|PNY05063.1| pentatricopeptide repeat-containing protein mitochondrial-like
           [Trifolium pratense]
          Length = 624

 Score =  117 bits (293), Expect = 1e-27
 Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
 Frame = +3

Query: 18  LLRSGLYPDRFTFPFLLRSCTRL---SDPYPGLQVHCHIKKFGLDLDVHVKNSLIAFYCH 188
           +L S + PD FTFPFLL+SC  L   S P  G QVHCH+ + G D DV VKN+L+ FYC 
Sbjct: 79  MLSSSISPDSFTFPFLLKSCANLLISSTPQLGFQVHCHVVRNGFDSDVFVKNALLNFYCV 138

Query: 189 LGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCGRAGDGLQIFEDMVGSGIGPDRHTFV 368
            G++  A  +F+E     ++ VS+N M+ G+V+ G      ++F +M    I PD +TFV
Sbjct: 139 FGDVDNAYKVFEESP--VRDCVSYNTMINGFVRAGVLSCCFRVFVEMSRFCIRPDEYTFV 196

Query: 369 CLMSICKVLGDLRSGKAVHVLALREVG 449
            L+S C +L D R G+ VH L  R +G
Sbjct: 197 ALLSGCSLLEDYRIGRQVHGLIYRILG 223



 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
 Frame = +3

Query: 39  PDRFTFPFLLRSCTRLSDPYPGLQVHCHIKK----FGLDL-------DVHVK-------- 161
           PD +TF  LL  C+ L D   G QVH  I +    FG ++       D++ K        
Sbjct: 190 PDEYTFVALLSGCSLLEDYRIGRQVHGLIYRILGNFGENVLLVNKLVDMYAKCGYLDMAE 249

Query: 162 ----------------NSLIAFYCHLGELAVARDLFDEITRWEKNPVSFNIMMRGYVKCG 293
                            SL++ Y   GE+ VAR LFD++   E++ VS+  M+ GY   G
Sbjct: 250 RVVRGVKVGKGVVEAWTSLVSAYALRGEVEVARRLFDQMG--ERDVVSWTAMISGYSHAG 307

Query: 294 RAGDGLQIFEDMVGSGIGPDRHTFVCLMSICKVLGDLRSGKAVH 425
              + L++F  + G G+ PD    V  +S C  LG L  GK +H
Sbjct: 308 CFQEALELFVQLEGLGMKPDDVAVVAALSACARLGALELGKRIH 351