BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00032775
         (673 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAE27219.1| hypothetical protein AXG93_4332s1160 [Marchantia ...    86   8e-16
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-...    84   4e-15
gb|ACN25531.1| unknown [Zea mays] >gi|1142626002|gb|ONL95064.1| ...    82   2e-14
gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit ...    82   2e-14
ref|NP_001147118.1| replication protein A1 [Zea mays] >gi|195607...    82   2e-14
gb|PPS07188.1| hypothetical protein GOBAR_AA13456 [Gossypium bar...    82   2e-14
gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group...    82   3e-14
ref|XP_015628911.1| PREDICTED: replication protein A 70 kDa DNA-...    82   3e-14
dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica...    81   4e-14
gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit ...    81   6e-14
ref|XP_006440765.1| replication protein A 70 kDa DNA-binding sub...    81   6e-14
gb|KJB19415.1| hypothetical protein B456_003G101500 [Gossypium r...    80   7e-14
ref|XP_020197717.1| replication protein A 70 kDa DNA-binding sub...    80   8e-14
gb|AGT17018.1| hypothetical protein SHCRBa_059_B13_F_80 [Sacchar...    80   8e-14
gb|AGT16980.1| Replication factor-a protein 1 Rpa1 [Saccharum hy...    80   8e-14
gb|AGT16722.1| replication protein [Saccharum hybrid cultivar R570]    80   8e-14
gb|AGT16009.1| replication protein [Saccharum hybrid cultivar R5...    80   8e-14
ref|XP_002468278.1| replication protein A 70 kDa DNA-binding sub...    80   8e-14
ref|XP_012470831.1| PREDICTED: replication protein A 70 kDa DNA-...    80   8e-14
ref|NP_001141474.1| Replication protein A DNA-binding subunit [Z...    80   1e-13

>gb|OAE27219.1| hypothetical protein AXG93_4332s1160 [Marchantia polymorpha subsp.
           ruderalis]
          Length = 632

 Score = 86.3 bits (212), Expect = 8e-16
 Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
 Frame = -3

Query: 587 AREFRELYIIVMVVYVGPLCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEW 408
           ARE  ++  +V  V +     +K + N  + KRD+ + D     + ITLW  LS  +G  
Sbjct: 320 ARELIDVIGVVQTVGLNASVRRK-ITNEEIPKRDVTIADESNKTVVITLWNALSSDQGAK 378

Query: 407 SQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWM-RTNMHAKMA 231
               +D  P+++   V+ ++Y+GL++ST+ HST+ INP I EA+ L  W   T   A MA
Sbjct: 379 LAGMVDEAPIVVFRSVRVSDYQGLSLSTVSHSTVLINPDIPEAKALRQWYEETGKSASMA 438

Query: 230 IQRVK---SCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLWYT 60
                            A A R+    + K    + K   Y+ +   IS +  D+++WY 
Sbjct: 439 PAGANLPGRMGGSMSSSAAAERVKLADVTKPEVGEGKP-AYFTVRACISFIKPDQAMWYL 497

Query: 59  TCKVCIKLVQWKDDNPY 9
            C  C + V  + D+ Y
Sbjct: 498 ACTACNRKVNQESDSSY 514


>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B
           [Brachypodium distachyon]
 gb|KQK22902.1| hypothetical protein BRADI_1g69980v3 [Brachypodium distachyon]
          Length = 635

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        II +V  V P L  ++ + N  + KRD++V D     +T+TLW  L
Sbjct: 320 VGGRELVD------IIGVVQSVSPTLSIRRKIDNETIPKRDIVVADDSNKTVTVTLWNDL 373

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRT- 252
           +   GE     +DS P++    +K ++++G+++ST+  STL INP + EA+KL  W  + 
Sbjct: 374 ATTIGEQLLDMVDSAPVIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEADKLRTWYESE 433

Query: 251 -------NMHAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTIS 93
                  ++ A M   R              S I     L     Q+K  V++ +   IS
Sbjct: 434 GKGTSMASVGADMGASRTGGSRSMYSDRVFLSHITSDPNL----GQDKP-VFFSLNAYIS 488

Query: 92  EVNTDRSLWYTTCKVCIKLV 33
            +  D+++WY  CK C K V
Sbjct: 489 HIKPDQTMWYRACKTCNKKV 508


>gb|ACN25531.1| unknown [Zea mays]
 gb|ONL95064.1| Replication protein A 70 kDa DNA-binding subunit B [Zea mays]
          Length = 617

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  IV VV  V P L  ++ + N  + KRD++V D     ++I+LW  L+   G+   
Sbjct: 306 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLATTTGQELL 365

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN--------M 246
              DS+P++    +K ++++G+++ST+  STL INP + EA+ L  W  +         +
Sbjct: 366 NMADSSPVVAIKSLKVSDFQGVSLSTVGKSTLAINPDLHEAQNLKSWYDSEGKDTSLAPI 425

Query: 245 HAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLW 66
            A+M   R    +         S I           QEK  V++ +  TIS +  D+++W
Sbjct: 426 GAEMGAARAGGFKSTYSDRVFLSHITS----DPAMGQEKP-VFFSLYATISHIKPDQNMW 480

Query: 65  YTTCKVCIKLV 33
           Y  CK C K V
Sbjct: 481 YRACKTCNKKV 491


>gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
          Length = 618

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  IV VV  V P L  ++ + N  + KRD++V D     ++I+LW  L+   G+   
Sbjct: 306 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLATTTGQELL 365

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN--------M 246
              DS+P++    +K ++++G+++ST+  STL INP + EA+ L  W  +         +
Sbjct: 366 DMADSSPVVAIKSLKVSDFQGVSLSTVGKSTLAINPDLHEAQNLKSWYDSEGKDTSLAPI 425

Query: 245 HAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLW 66
            A+M   R    +         S I           QEK  V++ +  TIS +  D+++W
Sbjct: 426 GAEMGAARAGGFKSTYSDRVFLSHITS----DPAMGQEKP-VFFSLYATISHIKPDQNMW 480

Query: 65  YTTCKVCIKLV 33
           Y  CK C K V
Sbjct: 481 YRACKTCNKKV 491


>ref|NP_001147118.1| replication protein A1 [Zea mays]
 gb|ACG25536.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
          Length = 618

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        II +V  V P L  ++ + N  + KRD++V D     ++I+LW  L
Sbjct: 303 VGGRELVD------IIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDL 356

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN 249
           +   G+      DS+P++    +K ++++G+++ST+  STL INP + EA+ L  W  + 
Sbjct: 357 TTTTGQELLDMADSSPVVAIKSLKVSDFQGVSLSTVGKSTLAINPDLHEAQNLKSWYDSE 416

Query: 248 --------MHAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTIS 93
                   + A+M   R    +         S I           QEK  V++ +  TIS
Sbjct: 417 GKDTSLAPIGAEMGAARAGGFKSTYSDRVFLSHITS----DPAMGQEKP-VFFSLYATIS 471

Query: 92  EVNTDRSLWYTTCKVCIKLV 33
            +  D+++WY  CK C K V
Sbjct: 472 HIKPDQNMWYRACKTCNKKV 491


>gb|PPS07188.1| hypothetical protein GOBAR_AA13456 [Gossypium barbadense]
          Length = 626

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGPLCE-KKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  I+ VV  V P+   K+ + N  + KRDLIV D     + ++LW  L+   G+   
Sbjct: 312 RELVDIIGVVQSVNPVSNIKRKIDNENIPKRDLIVADETKKTVVVSLWNELANNIGQELF 371

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTNMHAKMAIQR 222
            N D +P++    +K ++++G+++STL  S++ INP I EA+KL  W  +          
Sbjct: 372 DNADKSPIVAIKSLKVSDFQGVSLSTLGKSSVMINPDIPEAKKLRSWYDSEGKGSSMASI 431

Query: 221 VKSCEDKADILARASRINCVQLLKQLQNQ---EKTVVYYRMMGTISEVNTDRSLWYTTCK 51
                  + I AR+   + V L     N    ++   ++ +   +S +  ++++WY  CK
Sbjct: 432 GLGLSPSSKIGARSMYTDRVSLTHVTSNPSLGDEKPAFFSIKAFVSLIRPEQAMWYRACK 491

Query: 50  VCIKLV 33
            C K V
Sbjct: 492 TCNKKV 497


>gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
 gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group]
          Length = 630

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        +I +V  V P L  ++ + N  + KRD++V D     +TI+LW  L
Sbjct: 315 VGGRELVD------VIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDL 368

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFW---- 261
           +   G+     +DS P++    +K ++++GL++ST+  ST+ +NP + EAE+L  W    
Sbjct: 369 ATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSE 428

Query: 260 ----MRTNMHAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTIS 93
                  ++ + M   RV             S I     L     Q+K  V++ +   IS
Sbjct: 429 GKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNL----GQDKP-VFFSLNAYIS 483

Query: 92  EVNTDRSLWYTTCKVCIKLV 33
            +  D+++WY  CK C K V
Sbjct: 484 LIKPDQTMWYRACKTCNKKV 503


>ref|XP_015628911.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B
           [Oryza sativa Japonica Group]
 sp|Q10Q08.1|RFA1B_ORYSJ RecName: Full=Replication protein A 70 kDa DNA-binding subunit B;
           Short=OsRPA70b; AltName: Full=Replication factor A
           protein 1B; AltName: Full=Replication protein A 1B
 gb|ABF94627.1| replication factor-a protein 1 containing protein, expressed [Oryza
           sativa Japonica Group]
 dbj|BAF11283.1| Os03g0214100 [Oryza sativa Japonica Group]
 gb|EAZ26052.1| hypothetical protein OsJ_09906 [Oryza sativa Japonica Group]
 dbj|BAS82952.1| Os03g0214100 [Oryza sativa Japonica Group]
          Length = 630

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        +I +V  V P L  ++ + N  + KRD++V D     +TI+LW  L
Sbjct: 315 VGGRELVD------VIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDL 368

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFW---- 261
           +   G+     +DS P++    +K ++++GL++ST+  ST+ +NP + EAE+L  W    
Sbjct: 369 ATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSE 428

Query: 260 ----MRTNMHAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTIS 93
                  ++ + M   RV             S I     L     Q+K  V++ +   IS
Sbjct: 429 GKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNL----GQDKP-VFFSLNAYIS 483

Query: 92  EVNTDRSLWYTTCKVCIKLV 33
            +  D+++WY  CK C K V
Sbjct: 484 LIKPDQTMWYRACKTCNKKV 503


>dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica Group]
          Length = 630

 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        +I +V  V P L  ++ + N  + KRD++V D     +TI+LW  L
Sbjct: 315 VGGRELVD------VIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDL 368

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFW---- 261
           +   G+     +DS P++    +K ++++GL++ST+  ST+ +NP + EAE+L  W    
Sbjct: 369 ATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVLNPDLPEAEQLRAWYDSE 428

Query: 260 ----MRTNMHAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTIS 93
                  ++ + M   RV             S I     L     Q+K  V++ +   IS
Sbjct: 429 GKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNL----GQDKP-VFFSLNAYIS 483

Query: 92  EVNTDRSLWYTTCKVCIKLV 33
            +  D+++WY  CK C K V
Sbjct: 484 LIKPDQTMWYRACKTCNKKV 503


>gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit [Triticum urartu]
          Length = 592

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        II +V  V P L  ++ + N  + KRD++V D     +TI+LW  L
Sbjct: 277 VGGRELVD------IIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTISLWNDL 330

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN 249
           +   GE     +DS P++    +K ++++G+++ST+  STL INP + EAEKL  W  + 
Sbjct: 331 ATTVGEELLDMVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEAEKLRAWYESE 390

Query: 248 MHAK--MAIQRVKSCEDKADILARAS-RINCVQLLKQLQNQEKTVVYYRMMGTISEVNTD 78
                  ++       +   + +  S R+    +       +   V++ +   IS +  D
Sbjct: 391 GKGTTLASVGAGMGASNAGGLRSMYSDRVFLSHITSDPNLGQDKPVFFSLYANISNIKPD 450

Query: 77  RSLWYTTCKVCIKLV 33
           +++WY  C  C K V
Sbjct: 451 QTMWYRACTTCNKKV 465


>ref|XP_006440765.1| replication protein A 70 kDa DNA-binding subunit B [Citrus
           clementina]
 gb|ESR54005.1| hypothetical protein CICLE_v10019317mg [Citrus clementina]
          Length = 623

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
 Frame = -3

Query: 563 IIVMVVYVGPLCE-KKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQQNIDS 387
           II +V  V P    ++   N +V KRD+ V D     +T++LW  L+   G+    N D 
Sbjct: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371

Query: 386 NPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTNMHAKMAIQRVKSCE 207
           +P++    +K  +++G+++STL  ST+ +NP + EA+KL  W  +               
Sbjct: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVLVNPDLPEAKKLKSWYESEGKGTSMASIGSGLG 431

Query: 206 DKADILAR---ASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLWYTTCKVCIKL 36
             A   AR   + R++   +       ++  V++ +   IS +  D+++WY  CK C K 
Sbjct: 432 SLAKSGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKK 491

Query: 35  V 33
           V
Sbjct: 492 V 492


>gb|KJB19415.1| hypothetical protein B456_003G101500 [Gossypium raimondii]
          Length = 532

 Score = 80.5 bits (197), Expect = 7e-14
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGPLCE-KKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  I+ VV  V P+   K+ + N  + KRDLIV D     + ++LW  L+   G+   
Sbjct: 312 RELVDIIGVVQSVNPVSNIKRRIDNENIPKRDLIVADETKKTVVVSLWNELANNVGQELF 371

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTNMHAKMAIQR 222
            N D +P++    +K  +++G+++STL  S++ INP I EA+KL  W  +          
Sbjct: 372 DNADKSPIVAIKSLKVGDFQGVSLSTLGKSSVMINPDIPEAKKLRSWYDSEGKGSSMASI 431

Query: 221 VKSCEDKADILARASRINCVQLLKQLQNQ---EKTVVYYRMMGTISEVNTDRSLWYTTCK 51
                  +   AR+   + V L+    N    ++   ++ +   +S +  ++++WY  CK
Sbjct: 432 GLGLSPSSKTGARSMYTDRVSLMHITSNPSLGDEKPAFFSIKAFVSLIRPEQAMWYRACK 491

Query: 50  VCIKLV 33
            C K V
Sbjct: 492 TCNKKV 497


>ref|XP_020197717.1| replication protein A 70 kDa DNA-binding subunit B-like [Aegilops
           tauschii subsp. tauschii]
          Length = 622

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        II +V  V P L  ++ + N  + KRD++V D     +TI+LW  L
Sbjct: 307 VGGRELVD------IIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTISLWNDL 360

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN 249
           +   GE     +DS P++    +K ++++G+++ST+  STL INP + E EKL  W  + 
Sbjct: 361 ATTVGEELLDMVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESE 420

Query: 248 MH--AKMAIQRVKSCEDKADILARAS-RINCVQLLKQLQNQEKTVVYYRMMGTISEVNTD 78
               A  ++       +   + +  S R+    +       +   V++ +   IS +  D
Sbjct: 421 GKGTALASVGAGMGASNAGGLRSMYSDRVFLSHITSDPNLGQDKPVFFSLYANISNIKPD 480

Query: 77  RSLWYTTCKVCIKLV 33
           +++WY  C  C K V
Sbjct: 481 QTMWYRACTTCNKKV 495


>gb|AGT17018.1| hypothetical protein SHCRBa_059_B13_F_80 [Saccharum hybrid cultivar
           R570]
          Length = 623

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  IV VV  V P L  ++ + N  + KRD++V D     + I+LW  L+   G+   
Sbjct: 311 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVNISLWNDLATMTGQELL 370

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN--------M 246
             +DS+P++    +K ++++G+++ST+  STL INP + EA+ L  W  +         +
Sbjct: 371 DMVDSSPVVAIKSLKVSDFQGVSLSTIGKSTLVINPGLPEAQNLKSWYDSEGKDTSLAPV 430

Query: 245 HAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLW 66
            A+M   R    +        + R+    +       ++  V++ +   IS +  D+++W
Sbjct: 431 GAEMGATRAGGLKS-----MYSDRVFLSHITSDPAMGQERPVFFSLNAIISHIKPDQNMW 485

Query: 65  YTTCKVCIKLV 33
           Y  CK C K V
Sbjct: 486 YRACKTCNKKV 496


>gb|AGT16980.1| Replication factor-a protein 1 Rpa1 [Saccharum hybrid cultivar
           R570]
          Length = 623

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  IV VV  V P L  ++ + N  + KRD++V D     + I+LW  L+   G+   
Sbjct: 311 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVNISLWNDLATMTGQELL 370

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN--------M 246
             +DS+P++    +K ++++G+++ST+  STL INP + EA+ L  W  +         +
Sbjct: 371 DMVDSSPVVAIKSLKVSDFQGVSLSTIGKSTLVINPGLPEAQNLKSWYDSEGKDTSLAPV 430

Query: 245 HAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLW 66
            A+M   R    +        + R+    +       ++  V++ +   IS +  D+++W
Sbjct: 431 GAEMGATRAGGLKS-----MYSDRVFLSHITSDPAMGQERPVFFSLNAIISHIKPDQNMW 485

Query: 65  YTTCKVCIKLV 33
           Y  CK C K V
Sbjct: 486 YRACKTCNKKV 496


>gb|AGT16722.1| replication protein [Saccharum hybrid cultivar R570]
          Length = 623

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  IV VV  V P L  ++ + N  + KRD++V D     + I+LW  L+   G+   
Sbjct: 311 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVNISLWNDLATMTGQELL 370

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN--------M 246
             +DS+P++    +K ++++G+++ST+  STL INP + EA+ L  W  +         +
Sbjct: 371 DMVDSSPVVAIKSLKVSDFQGVSLSTIGKSTLVINPGLPEAQNLKSWYDSEGKDTSLAPV 430

Query: 245 HAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLW 66
            A+M   R    +        + R+    +       ++  V++ +   IS +  D+++W
Sbjct: 431 GAEMGATRAGGLKS-----MYSDRVFLSHITSDPAMGQERPVFFSLNAIISHIKPDQNMW 485

Query: 65  YTTCKVCIKLV 33
           Y  CK C K V
Sbjct: 486 YRACKTCNKKV 496


>gb|AGT16009.1| replication protein [Saccharum hybrid cultivar R570]
 gb|AGT16148.1| Replication factor-a protein 1 Rpa1 [Saccharum hybrid cultivar
           R570]
          Length = 623

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 10/191 (5%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  IV V+  V P L  ++ + N  + KRD++V D     + I+LW  L+   G+   
Sbjct: 311 RELVDIVGVIQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVNISLWNDLATMTGQELL 370

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN--------M 246
             +DS+P++    +K ++++G+++ST+  STL INP + EA+ L  W  +         +
Sbjct: 371 DMVDSSPVVAIKSLKVSDFQGVSLSTIGKSTLVINPGLPEAQNLKSWYDSEGKDTSLAPV 430

Query: 245 HAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLW 66
            A+M   R    +        ++R+    +       ++  V++ +   IS +  D+++W
Sbjct: 431 GAEMGATRAGGLKS-----MYSNRVFLSHITSDPAMGQERPVFFSLNAIISHIKPDQNMW 485

Query: 65  YTTCKVCIKLV 33
           Y  CK C K V
Sbjct: 486 YRACKTCNKKV 496


>ref|XP_002468278.1| replication protein A 70 kDa DNA-binding subunit B [Sorghum
           bicolor]
 gb|EER95276.1| hypothetical protein SORBI_3001G456500 [Sorghum bicolor]
          Length = 623

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
 Frame = -3

Query: 605 LGGRKLAREFRELYIIVMVVYVGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRL 429
           +GGR+L        II +V  V P L  ++ + N  + KRD++V D     ++I+LW  L
Sbjct: 308 VGGRELVD------IIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDL 361

Query: 428 SEFEGEWSQQNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN 249
           +   G+     +DS+P++    +K ++++G+++ST+  STL INP + EA+ +  W  + 
Sbjct: 362 ATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLAINPDLPEAQNVKSWYDSE 421

Query: 248 --------MHAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTIS 93
                   + A+M   R    +         S I           QEK  V++ +   IS
Sbjct: 422 GKDTSLAPIGAEMGAARAGGLKSMYSDRVFLSHITS----DPAMGQEKP-VFFSLNAIIS 476

Query: 92  EVNTDRSLWYTTCKVCIKLV 33
            +  D+++WY  CK C K V
Sbjct: 477 HIKPDQNMWYRACKTCNKKV 496


>ref|XP_012470831.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
           [Gossypium raimondii]
 gb|KJB19414.1| hypothetical protein B456_003G101500 [Gossypium raimondii]
          Length = 626

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGPLCE-KKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  I+ VV  V P+   K+ + N  + KRDLIV D     + ++LW  L+   G+   
Sbjct: 312 RELVDIIGVVQSVNPVSNIKRRIDNENIPKRDLIVADETKKTVVVSLWNELANNVGQELF 371

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTNMHAKMAIQR 222
            N D +P++    +K  +++G+++STL  S++ INP I EA+KL  W  +          
Sbjct: 372 DNADKSPIVAIKSLKVGDFQGVSLSTLGKSSVMINPDIPEAKKLRSWYDSEGKGSSMASI 431

Query: 221 VKSCEDKADILARASRINCVQLLKQLQNQ---EKTVVYYRMMGTISEVNTDRSLWYTTCK 51
                  +   AR+   + V L+    N    ++   ++ +   +S +  ++++WY  CK
Sbjct: 432 GLGLSPSSKTGARSMYTDRVSLMHITSNPSLGDEKPAFFSIKAFVSLIRPEQAMWYRACK 491

Query: 50  VCIKLV 33
            C K V
Sbjct: 492 TCNKKV 497


>ref|NP_001141474.1| Replication protein A DNA-binding subunit [Zea mays]
 gb|ACF86445.1| unknown [Zea mays]
 gb|ACG43199.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
 gb|AQL08658.1| Replication protein A 70 kDa DNA-binding subunit B [Zea mays]
          Length = 623

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
 Frame = -3

Query: 575 RELYIIVMVVY-VGP-LCEKKFLGNRIVFKRDLIVLDHILSPITITLWGRLSEFEGEWSQ 402
           REL  IV VV  V P L  ++ + N  + KRD++V D     +TI+LW  L+   G+   
Sbjct: 311 RELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELL 370

Query: 401 QNIDSNPLLLASGVKATNYKGLAISTLEHSTLKINPCIREAEKLYFWMRTN--------M 246
             +DS+P++    +K ++++G+++ST+  STL+INP + EA+ L  W  +         +
Sbjct: 371 DMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 430

Query: 245 HAKMAIQRVKSCEDKADILARASRINCVQLLKQLQNQEKTVVYYRMMGTISEVNTDRSLW 66
            A++   R    +         S I           QEK  V++ +   IS +  D+++W
Sbjct: 431 SAEVGATRAGGFKSMYSDRVFLSHITS----DPAMGQEKP-VFFSLYAIISHIKPDQNMW 485

Query: 65  YTTCKVCIKLV 33
           Y  C  C K V
Sbjct: 486 YRACTTCNKKV 496