BLASTX nr result
ID: Ophiopogon23_contig00031838
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00031838
(709 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIU48189.1| MSH1, partial [Yucca filamentosa] 424 e-141
gb|ONK57299.1| uncharacterized protein A4U43_C10F18640 [Asparagu... 420 e-137
ref|XP_020247486.1| LOW QUALITY PROTEIN: DNA mismatch repair pro... 420 e-136
gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei] 386 e-126
ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1,... 383 e-122
ref|XP_019705613.1| PREDICTED: DNA mismatch repair protein MSH1,... 377 e-122
ref|XP_020084562.1| DNA mismatch repair protein MSH1, mitochondr... 372 e-120
ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1,... 377 e-120
ref|XP_020084561.1| DNA mismatch repair protein MSH1, mitochondr... 372 e-119
ref|XP_020699189.1| DNA mismatch repair protein MSH1, mitochondr... 369 e-119
ref|XP_020699188.1| DNA mismatch repair protein MSH1, mitochondr... 369 e-118
ref|XP_020084560.1| DNA mismatch repair protein MSH1, mitochondr... 372 e-118
gb|AIU48171.1| MSH1, partial [Buxus sinica] 365 e-118
gb|AIU48188.1| MSH1, partial [Dioscorea oppositifolia] 367 e-117
ref|XP_020699187.1| DNA mismatch repair protein MSH1, mitochondr... 369 e-117
ref|XP_020699185.1| DNA mismatch repair protein MSH1, mitochondr... 369 e-117
ref|XP_020699183.1| DNA mismatch repair protein MSH1, mitochondr... 369 e-117
ref|XP_018686523.1| PREDICTED: DNA mismatch repair protein MSH1,... 358 e-115
ref|XP_020699186.1| DNA mismatch repair protein MSH1, mitochondr... 360 e-114
gb|AIU48199.1| MSH1, partial [Platanus x hispanica] 358 e-114
>gb|AIU48189.1| MSH1, partial [Yucca filamentosa]
Length = 778
Score = 424 bits (1089), Expect = e-141
Identities = 207/235 (88%), Positives = 220/235 (93%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MSNLTCS+PEFTCVSAAKL RLL+S+EANHIEFCRIKN+ADEILQMH NSEL+ ILH LL
Sbjct: 171 MSNLTCSIPEFTCVSAAKLVRLLDSREANHIEFCRIKNVADEILQMHGNSELSGILHILL 230
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP WAATGLKVEYDMLV++CGWIS+RIGEIISL ERDQEI S EFIPREFFEDMES WK
Sbjct: 231 EPAWAATGLKVEYDMLVTDCGWISRRIGEIISLGGERDQEISSLEFIPREFFEDMESLWK 290
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA DVFAEV++AAQSLS AV+EDF PIVSRVKSV+SSFGGPKGEICYAREHEAV
Sbjct: 291 GRVKRIHAEDVFAEVDRAAQSLSTAVMEDFAPIVSRVKSVMSSFGGPKGEICYAREHEAV 350
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMPSVWANTPGEEQIKQL+ ATDSKGRKVGEEWFTTNNVE ALTRYHEA
Sbjct: 351 WFKGKRFMPSVWANTPGEEQIKQLKPATDSKGRKVGEEWFTTNNVENALTRYHEA 405
>gb|ONK57299.1| uncharacterized protein A4U43_C10F18640 [Asparagus officinalis]
Length = 1074
Score = 420 bits (1079), Expect = e-137
Identities = 202/235 (85%), Positives = 220/235 (93%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MS LTCS+PEFTCVSAAKL RLLES+EANHIEFCRIKN+ADEILQMH+NSEL+AILH LL
Sbjct: 422 MSTLTCSIPEFTCVSAAKLVRLLESREANHIEFCRIKNVADEILQMHRNSELSAILHILL 481
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EPTW +TGLKVEY+MLV+ECGWISQRIGEIISL E DQEI SPE+IPREFFEDMESSW+
Sbjct: 482 EPTWVSTGLKVEYEMLVTECGWISQRIGEIISLGGETDQEISSPEYIPREFFEDMESSWR 541
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA DVFAEVE+AAQSLS AV+EDFIPIVSRVKS++S+ GGPKGE+CYAREHEAV
Sbjct: 542 GRVKRIHAEDVFAEVERAAQSLSIAVMEDFIPIVSRVKSIMSTLGGPKGEVCYAREHEAV 601
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMPSVWANTPGEEQIKQLR A D+KGRKVGEEWF TNNV+ ALTRYHEA
Sbjct: 602 WFKGKRFMPSVWANTPGEEQIKQLRPAIDAKGRKVGEEWFATNNVDNALTRYHEA 656
>ref|XP_020247486.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1, mitochondrial
[Asparagus officinalis]
Length = 1125
Score = 420 bits (1079), Expect = e-136
Identities = 202/235 (85%), Positives = 220/235 (93%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MS LTCS+PEFTCVSAAKL RLLES+EANHIEFCRIKN+ADEILQMH+NSEL+AILH LL
Sbjct: 422 MSTLTCSIPEFTCVSAAKLVRLLESREANHIEFCRIKNVADEILQMHRNSELSAILHILL 481
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EPTW +TGLKVEY+MLV+ECGWISQRIGEIISL E DQEI SPE+IPREFFEDMESSW+
Sbjct: 482 EPTWVSTGLKVEYEMLVTECGWISQRIGEIISLGGETDQEISSPEYIPREFFEDMESSWR 541
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA DVFAEVE+AAQSLS AV+EDFIPIVSRVKS++S+ GGPKGE+CYAREHEAV
Sbjct: 542 GRVKRIHAEDVFAEVERAAQSLSIAVMEDFIPIVSRVKSIMSTLGGPKGEVCYAREHEAV 601
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMPSVWANTPGEEQIKQLR A D+KGRKVGEEWF TNNV+ ALTRYHEA
Sbjct: 602 WFKGKRFMPSVWANTPGEEQIKQLRPAIDAKGRKVGEEWFATNNVDNALTRYHEA 656
>gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei]
Length = 848
Score = 386 bits (991), Expect = e-126
Identities = 189/235 (80%), Positives = 208/235 (88%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MSN+TCS+PEFTC+SA KL +LLESKEANH+EFCRIKN+ DEILQM K +EL+ ILH LL
Sbjct: 171 MSNVTCSIPEFTCISAPKLVKLLESKEANHVEFCRIKNVVDEILQMDKITELSTILHILL 230
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EPTW ATGLKVEYD LV+EC +SQRIGEIISLS E DQEI S EFIPREFFEDMESSWK
Sbjct: 231 EPTWVATGLKVEYDRLVNECSLVSQRIGEIISLSGESDQEINSFEFIPREFFEDMESSWK 290
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + FAEVE+AA++LS AV+EDF P+VSRVKSV+S GGPKGEICYAREHEAV
Sbjct: 291 GRVKRIHAEEAFAEVERAAKALSVAVMEDFFPVVSRVKSVVSPLGGPKGEICYAREHEAV 350
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMP+VWANT GEEQIKQLR ATDSKGRKVGEEWFTT V+ AL RYHEA
Sbjct: 351 WFKGKRFMPAVWANTLGEEQIKQLRPATDSKGRKVGEEWFTTMKVDDALNRYHEA 405
>ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Phoenix
dactylifera]
Length = 1138
Score = 383 bits (984), Expect = e-122
Identities = 188/235 (80%), Positives = 208/235 (88%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MSN+TCS+PEFTC+SA KL +LLESKEANH+EFCRIKN+ DEILQM K +EL+ IL LL
Sbjct: 428 MSNVTCSIPEFTCISAPKLVKLLESKEANHVEFCRIKNVVDEILQMDKITELSTILRILL 487
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EPTW ATGLKVE+D LV+EC +SQRIGEIISLS E DQEI S EFIPREFFEDMESSW+
Sbjct: 488 EPTWVATGLKVEHDRLVNECSLVSQRIGEIISLSGESDQEINSFEFIPREFFEDMESSWR 547
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + FAEVE+AA++LS AV+EDF PIVSRVKSV+S GGPKGEICYAREHEAV
Sbjct: 548 GRVKRIHAEEAFAEVERAAKALSVAVMEDFFPIVSRVKSVVSPLGGPKGEICYAREHEAV 607
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMP+VWANTPGEEQIK+LR ATDSKGRKVGEEWFTT VE AL RYHEA
Sbjct: 608 WFKGKRFMPAVWANTPGEEQIKKLRHATDSKGRKVGEEWFTTIKVEDALNRYHEA 662
>ref|XP_019705613.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform
X2 [Elaeis guineensis]
Length = 892
Score = 377 bits (969), Expect = e-122
Identities = 185/235 (78%), Positives = 205/235 (87%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MSN+T S+PEFTC+SA KL +LLESKE NH+EFCRIKN+ DEILQM +++ELA ILH LL
Sbjct: 182 MSNVTSSIPEFTCMSAPKLVKLLESKEVNHVEFCRIKNVVDEILQMSRSTELATILHILL 241
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EPTW ATGLKVEYD LV+EC +S+RIGEIISL E DQEI S E IPREFFEDMESSWK
Sbjct: 242 EPTWVATGLKVEYDRLVNECSLVSKRIGEIISLGGESDQEISSFECIPREFFEDMESSWK 301
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + FAEVE+AA++LS AV+ED PIVSRVKSV+SS GGPKGEICYAREHEAV
Sbjct: 302 GRVKRIHAEEAFAEVERAAKALSVAVMEDLFPIVSRVKSVVSSLGGPKGEICYAREHEAV 361
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMP+VWANTPGEEQIKQLR A DSKGRKVGEEWFTT +E AL RYHEA
Sbjct: 362 WFKGKRFMPAVWANTPGEEQIKQLRPAMDSKGRKVGEEWFTTIKIEGALNRYHEA 416
>ref|XP_020084562.1| DNA mismatch repair protein MSH1, mitochondrial isoform X3 [Ananas
comosus]
Length = 890
Score = 372 bits (956), Expect = e-120
Identities = 178/235 (75%), Positives = 206/235 (87%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MS++TCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEI+ M++NSEL+ IL LL
Sbjct: 182 MSSVTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEIMHMNRNSELSGILSILL 241
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP WAATGLKVEYD+LV EC ISQRI EIISL DE DQ+I S EFIP +FFEDMESSWK
Sbjct: 242 EPAWAATGLKVEYDVLVDECSLISQRIAEIISLGDESDQQISSFEFIPGDFFEDMESSWK 301
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKR+HA D FAEVE+A ++LS A++EDF+PI+ R+KSV+S GGP+GEICY+REHEAV
Sbjct: 302 GRVKRMHAEDAFAEVERAGKALSIAIMEDFVPIIERLKSVMSPLGGPRGEICYSREHEAV 361
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMP VWANTPGEEQIK LR ATDSKGRKVGE+WFTT VE A++RYHEA
Sbjct: 362 WFKGKRFMPKVWANTPGEEQIKLLRPATDSKGRKVGEDWFTTVKVENAMSRYHEA 416
>ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Elaeis guineensis]
Length = 1134
Score = 377 bits (969), Expect = e-120
Identities = 185/235 (78%), Positives = 205/235 (87%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MSN+T S+PEFTC+SA KL +LLESKE NH+EFCRIKN+ DEILQM +++ELA ILH LL
Sbjct: 424 MSNVTSSIPEFTCMSAPKLVKLLESKEVNHVEFCRIKNVVDEILQMSRSTELATILHILL 483
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EPTW ATGLKVEYD LV+EC +S+RIGEIISL E DQEI S E IPREFFEDMESSWK
Sbjct: 484 EPTWVATGLKVEYDRLVNECSLVSKRIGEIISLGGESDQEISSFECIPREFFEDMESSWK 543
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + FAEVE+AA++LS AV+ED PIVSRVKSV+SS GGPKGEICYAREHEAV
Sbjct: 544 GRVKRIHAEEAFAEVERAAKALSVAVMEDLFPIVSRVKSVVSSLGGPKGEICYAREHEAV 603
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMP+VWANTPGEEQIKQLR A DSKGRKVGEEWFTT +E AL RYHEA
Sbjct: 604 WFKGKRFMPAVWANTPGEEQIKQLRPAMDSKGRKVGEEWFTTIKIEGALNRYHEA 658
>ref|XP_020084561.1| DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Ananas
comosus]
Length = 1010
Score = 372 bits (956), Expect = e-119
Identities = 178/235 (75%), Positives = 206/235 (87%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MS++TCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEI+ M++NSEL+ IL LL
Sbjct: 302 MSSVTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEIMHMNRNSELSGILSILL 361
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP WAATGLKVEYD+LV EC ISQRI EIISL DE DQ+I S EFIP +FFEDMESSWK
Sbjct: 362 EPAWAATGLKVEYDVLVDECSLISQRIAEIISLGDESDQQISSFEFIPGDFFEDMESSWK 421
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKR+HA D FAEVE+A ++LS A++EDF+PI+ R+KSV+S GGP+GEICY+REHEAV
Sbjct: 422 GRVKRMHAEDAFAEVERAGKALSIAIMEDFVPIIERLKSVMSPLGGPRGEICYSREHEAV 481
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMP VWANTPGEEQIK LR ATDSKGRKVGE+WFTT VE A++RYHEA
Sbjct: 482 WFKGKRFMPKVWANTPGEEQIKLLRPATDSKGRKVGEDWFTTVKVENAMSRYHEA 536
>ref|XP_020699189.1| DNA mismatch repair protein MSH1, mitochondrial isoform X6
[Dendrobium catenatum]
Length = 894
Score = 369 bits (946), Expect = e-119
Identities = 177/235 (75%), Positives = 201/235 (85%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
M LTCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEILQMH+N+EL+AILH LL
Sbjct: 182 MRCLTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEILQMHRNTELSAILHILL 241
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP W ATGLKV+YD+LV ECG +SQRIGE+ISLS ERDQEICS IP +FF DMESSWK
Sbjct: 242 EPAWLATGLKVDYDILVQECGLVSQRIGEMISLSGERDQEICSFSDIPSDFFYDMESSWK 301
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + F V+ AA+SLS AV+EDF+P+V RVK ++SS GGPKGEICYARE EAV
Sbjct: 302 GRVKRIHAEEAFGNVDSAAESLSIAVMEDFVPVVQRVKCMVSSLGGPKGEICYAREQEAV 361
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKG+ FMPSVWANTPGEEQIKQL+ A DS+ RKVGEEW+TT VE AL RYH A
Sbjct: 362 WFKGRHFMPSVWANTPGEEQIKQLKPAVDSRRRKVGEEWYTTTKVEDALLRYHHA 416
>ref|XP_020699188.1| DNA mismatch repair protein MSH1, mitochondrial isoform X5
[Dendrobium catenatum]
Length = 923
Score = 369 bits (946), Expect = e-118
Identities = 177/235 (75%), Positives = 201/235 (85%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
M LTCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEILQMH+N+EL+AILH LL
Sbjct: 211 MRCLTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEILQMHRNTELSAILHILL 270
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP W ATGLKV+YD+LV ECG +SQRIGE+ISLS ERDQEICS IP +FF DMESSWK
Sbjct: 271 EPAWLATGLKVDYDILVQECGLVSQRIGEMISLSGERDQEICSFSDIPSDFFYDMESSWK 330
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + F V+ AA+SLS AV+EDF+P+V RVK ++SS GGPKGEICYARE EAV
Sbjct: 331 GRVKRIHAEEAFGNVDSAAESLSIAVMEDFVPVVQRVKCMVSSLGGPKGEICYAREQEAV 390
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKG+ FMPSVWANTPGEEQIKQL+ A DS+ RKVGEEW+TT VE AL RYH A
Sbjct: 391 WFKGRHFMPSVWANTPGEEQIKQLKPAVDSRRRKVGEEWYTTTKVEDALLRYHHA 445
>ref|XP_020084560.1| DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Ananas
comosus]
Length = 1132
Score = 372 bits (956), Expect = e-118
Identities = 178/235 (75%), Positives = 206/235 (87%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MS++TCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEI+ M++NSEL+ IL LL
Sbjct: 424 MSSVTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEIMHMNRNSELSGILSILL 483
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP WAATGLKVEYD+LV EC ISQRI EIISL DE DQ+I S EFIP +FFEDMESSWK
Sbjct: 484 EPAWAATGLKVEYDVLVDECSLISQRIAEIISLGDESDQQISSFEFIPGDFFEDMESSWK 543
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKR+HA D FAEVE+A ++LS A++EDF+PI+ R+KSV+S GGP+GEICY+REHEAV
Sbjct: 544 GRVKRMHAEDAFAEVERAGKALSIAIMEDFVPIIERLKSVMSPLGGPRGEICYSREHEAV 603
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRFMP VWANTPGEEQIK LR ATDSKGRKVGE+WFTT VE A++RYHEA
Sbjct: 604 WFKGKRFMPKVWANTPGEEQIKLLRPATDSKGRKVGEDWFTTVKVENAMSRYHEA 658
>gb|AIU48171.1| MSH1, partial [Buxus sinica]
Length = 854
Score = 365 bits (937), Expect = e-118
Identities = 175/235 (74%), Positives = 198/235 (84%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MSN+ CS+PEFTCVSAAKL RLLES+EANHIEFCRIKN+ADEILQMHKNSEL IL L+
Sbjct: 171 MSNVACSIPEFTCVSAAKLVRLLESREANHIEFCRIKNVADEILQMHKNSELYDILQYLM 230
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
+PTW ATGLK+E++ LVSEC W+S RIG++ISL E DQ+I S IP EFFEDMESSWK
Sbjct: 231 DPTWVATGLKIEFETLVSECEWVSYRIGKMISLDGENDQKISSSAIIPSEFFEDMESSWK 290
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKR+HA + FAEVEKAA++LS AV+EDF+PIVSR+K+ + GGPKGEI YAREHEAV
Sbjct: 291 GRVKRVHAEEAFAEVEKAAEALSKAVMEDFLPIVSRIKATTAPLGGPKGEILYAREHEAV 350
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRF P VWA TPGEEQIK LR A DSKGRKVGEEWFTT VE + RYHEA
Sbjct: 351 WFKGKRFTPVVWAGTPGEEQIKLLRPAIDSKGRKVGEEWFTTKKVEDGIIRYHEA 405
>gb|AIU48188.1| MSH1, partial [Dioscorea oppositifolia]
Length = 949
Score = 367 bits (941), Expect = e-117
Identities = 173/235 (73%), Positives = 202/235 (85%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MS +TCS+PEFTC+S AKL +LLESKE NHIEFCRIKN+ DE+L MH N EL+AILH LL
Sbjct: 276 MSRVTCSIPEFTCLSVAKLVKLLESKETNHIEFCRIKNVVDEVLLMHTNPELSAILHILL 335
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
+PTW ATGLKVEY+++V+EC WISQRIGE+IS+ E QEI S E IP +FF DMESSWK
Sbjct: 336 QPTWFATGLKVEYEIMVNECAWISQRIGEVISVDGEGGQEISSFELIPEDFFGDMESSWK 395
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + FAEV++AA+ LS ++EDF+PIVSRV++V+SS GGPKGEICYAREH AV
Sbjct: 396 GRVKRIHAEEAFAEVDRAAEVLSTTLMEDFVPIVSRVRTVMSSIGGPKGEICYAREHGAV 455
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRF+PS+W NTPGEEQIK+LR ATDSKGRKVGEEWFTT+ VE AL RYH A
Sbjct: 456 WFKGKRFIPSIWGNTPGEEQIKKLRPATDSKGRKVGEEWFTTSKVEDALNRYHVA 510
>ref|XP_020699187.1| DNA mismatch repair protein MSH1, mitochondrial isoform X4
[Dendrobium catenatum]
Length = 1051
Score = 369 bits (946), Expect = e-117
Identities = 177/235 (75%), Positives = 201/235 (85%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
M LTCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEILQMH+N+EL+AILH LL
Sbjct: 339 MRCLTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEILQMHRNTELSAILHILL 398
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP W ATGLKV+YD+LV ECG +SQRIGE+ISLS ERDQEICS IP +FF DMESSWK
Sbjct: 399 EPAWLATGLKVDYDILVQECGLVSQRIGEMISLSGERDQEICSFSDIPSDFFYDMESSWK 458
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + F V+ AA+SLS AV+EDF+P+V RVK ++SS GGPKGEICYARE EAV
Sbjct: 459 GRVKRIHAEEAFGNVDSAAESLSIAVMEDFVPVVQRVKCMVSSLGGPKGEICYAREQEAV 518
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKG+ FMPSVWANTPGEEQIKQL+ A DS+ RKVGEEW+TT VE AL RYH A
Sbjct: 519 WFKGRHFMPSVWANTPGEEQIKQLKPAVDSRRRKVGEEWYTTTKVEDALLRYHHA 573
>ref|XP_020699185.1| DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Dendrobium catenatum]
Length = 1129
Score = 369 bits (946), Expect = e-117
Identities = 177/235 (75%), Positives = 201/235 (85%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
M LTCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEILQMH+N+EL+AILH LL
Sbjct: 417 MRCLTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEILQMHRNTELSAILHILL 476
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP W ATGLKV+YD+LV ECG +SQRIGE+ISLS ERDQEICS IP +FF DMESSWK
Sbjct: 477 EPAWLATGLKVDYDILVQECGLVSQRIGEMISLSGERDQEICSFSDIPSDFFYDMESSWK 536
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + F V+ AA+SLS AV+EDF+P+V RVK ++SS GGPKGEICYARE EAV
Sbjct: 537 GRVKRIHAEEAFGNVDSAAESLSIAVMEDFVPVVQRVKCMVSSLGGPKGEICYAREQEAV 596
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKG+ FMPSVWANTPGEEQIKQL+ A DS+ RKVGEEW+TT VE AL RYH A
Sbjct: 597 WFKGRHFMPSVWANTPGEEQIKQLKPAVDSRRRKVGEEWYTTTKVEDALLRYHHA 651
>ref|XP_020699183.1| DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Dendrobium catenatum]
Length = 1136
Score = 369 bits (946), Expect = e-117
Identities = 177/235 (75%), Positives = 201/235 (85%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
M LTCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEILQMH+N+EL+AILH LL
Sbjct: 424 MRCLTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEILQMHRNTELSAILHILL 483
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP W ATGLKV+YD+LV ECG +SQRIGE+ISLS ERDQEICS IP +FF DMESSWK
Sbjct: 484 EPAWLATGLKVDYDILVQECGLVSQRIGEMISLSGERDQEICSFSDIPSDFFYDMESSWK 543
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + F V+ AA+SLS AV+EDF+P+V RVK ++SS GGPKGEICYARE EAV
Sbjct: 544 GRVKRIHAEEAFGNVDSAAESLSIAVMEDFVPVVQRVKCMVSSLGGPKGEICYAREQEAV 603
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKG+ FMPSVWANTPGEEQIKQL+ A DS+ RKVGEEW+TT VE AL RYH A
Sbjct: 604 WFKGRHFMPSVWANTPGEEQIKQLKPAVDSRRRKVGEEWYTTTKVEDALLRYHHA 658
>ref|XP_018686523.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 893
Score = 358 bits (920), Expect = e-115
Identities = 174/235 (74%), Positives = 201/235 (85%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MS++TCS+PEFTCVSAAKL +LLESKEANHIE CRIKN+ DEI+ M +N EL+AILH LL
Sbjct: 182 MSSVTCSIPEFTCVSAAKLVKLLESKEANHIELCRIKNVVDEIIHMSRNPELSAILHILL 241
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
+PTW ATGLKVEYD+LV+EC ISQ+IG+I+ + E QE S EFIP EFFE+MESSWK
Sbjct: 242 QPTWVATGLKVEYDVLVNECSCISQKIGDILFMRGESGQETSSLEFIPDEFFENMESSWK 301
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKR HA + FAEV+ AA +LS AV+EDF PIV RVKS+++ FGGPKGEICYAREH AV
Sbjct: 302 GRVKRCHAEEAFAEVDSAAMALSIAVMEDFSPIVLRVKSLMNPFGGPKGEICYAREHGAV 361
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKG+RF+P+VWANT GEEQIKQLR ATDSKGRKVGEEWFTT+ VE AL RYHEA
Sbjct: 362 WFKGRRFVPAVWANTTGEEQIKQLRPATDSKGRKVGEEWFTTSKVEEALNRYHEA 416
>ref|XP_020699186.1| DNA mismatch repair protein MSH1, mitochondrial isoform X3
[Dendrobium catenatum]
Length = 1088
Score = 360 bits (923), Expect = e-114
Identities = 173/229 (75%), Positives = 197/229 (86%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
M LTCS+PEFTC+SAAKL +LLESKEANHIEFCRIKN+ DEILQMH+N+EL+AILH LL
Sbjct: 424 MRCLTCSIPEFTCLSAAKLVKLLESKEANHIEFCRIKNVVDEILQMHRNTELSAILHILL 483
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
EP W ATGLKV+YD+LV ECG +SQRIGE+ISLS ERDQEICS IP +FF DMESSWK
Sbjct: 484 EPAWLATGLKVDYDILVQECGLVSQRIGEMISLSGERDQEICSFSDIPSDFFYDMESSWK 543
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + F V+ AA+SLS AV+EDF+P+V RVK ++SS GGPKGEICYARE EAV
Sbjct: 544 GRVKRIHAEEAFGNVDSAAESLSIAVMEDFVPVVQRVKCMVSSLGGPKGEICYAREQEAV 603
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIAL 689
WFKG+ FMPSVWANTPGEEQIKQL+ A DS+ RKVGEEW+TT VE AL
Sbjct: 604 WFKGRHFMPSVWANTPGEEQIKQLKPAVDSRRRKVGEEWYTTTKVEDAL 652
>gb|AIU48199.1| MSH1, partial [Platanus x hispanica]
Length = 1029
Score = 358 bits (919), Expect = e-114
Identities = 171/235 (72%), Positives = 197/235 (83%)
Frame = +3
Query: 3 MSNLTCSVPEFTCVSAAKLARLLESKEANHIEFCRIKNMADEILQMHKNSELAAILHKLL 182
MSN+TCS+PEFTCVSAAKL +LLES+EANHIEFCRIKN+ DEILQ+++N EL IL LL
Sbjct: 346 MSNVTCSIPEFTCVSAAKLVKLLESREANHIEFCRIKNVVDEILQLYRNPELYDILQLLL 405
Query: 183 EPTWAATGLKVEYDMLVSECGWISQRIGEIISLSDERDQEICSPEFIPREFFEDMESSWK 362
+PTW +TGLK+E++ LV+EC WIS RIGE+ISL E DQ+I S IP +FFEDMESSWK
Sbjct: 406 DPTWMSTGLKIEFETLVNECEWISYRIGEMISLDGENDQKINSSSIIPSDFFEDMESSWK 465
Query: 363 GRVKRIHAVDVFAEVEKAAQSLSNAVLEDFIPIVSRVKSVISSFGGPKGEICYAREHEAV 542
GRVKRIHA + F EVE+AA + S AV EDF+PIVSR+K+ ++ GGPKGEI YAREHEAV
Sbjct: 466 GRVKRIHAEEAFTEVERAADAFSTAVTEDFLPIVSRIKATMAPLGGPKGEILYAREHEAV 525
Query: 543 WFKGKRFMPSVWANTPGEEQIKQLRLATDSKGRKVGEEWFTTNNVEIALTRYHEA 707
WFKGKRF P+ WA TPGEEQIKQLR ATDSKGRKVGEEWFTT VE AL RYHEA
Sbjct: 526 WFKGKRFAPAAWAGTPGEEQIKQLRPATDSKGRKVGEEWFTTKKVEDALIRYHEA 580