BLASTX nr result
ID: Ophiopogon23_contig00029692
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00029692
(785 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 58 2e-15
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 50 3e-14
gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 50 9e-14
gb|ONM11203.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 51 1e-13
gb|KYP77525.1| Retrovirus-related Pol polyprotein LINE-1, partia... 51 3e-13
gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|AQK65817.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|ONM32720.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|ONM29620.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|AQK46390.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 4e-13
gb|AQK78972.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 7e-13
gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 55 2e-12
gb|ONM55518.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 55 2e-12
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 55 2e-12
gb|AQK84025.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 49 2e-12
gb|AQK69444.1| Nuclear pore complex protein NUP205 [Zea mays] 51 2e-11
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 57.8 bits (138), Expect(3) = 2e-15
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = -1
Query: 485 GVRELFPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
G E FPIT+GLH+ +LSP+LF+L M+E+T HIQD++PW +
Sbjct: 354 GQTESFPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCM 395
Score = 47.4 bits (111), Expect(3) = 2e-15
Identities = 35/100 (35%), Positives = 53/100 (53%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
E LE G + R+KTEYM FS ++E + + + K+ + S L +G
Sbjct: 420 EVLESKGLCLSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQK-NGEL 478
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+ HRI+ W KW+SAS V C+ +MP++L GK +TA
Sbjct: 479 DEDL-NHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTA 517
Score = 25.4 bits (54), Expect(3) = 2e-15
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEV 566
K YD+ +IIW +LEKK V
Sbjct: 311 KAYDRVSRDIIWRILEKKGV 330
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 50.1 bits (118), Expect(3) = 3e-14
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L M+E+T+ IQ ++PW +
Sbjct: 223 FPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCM 259
Score = 48.5 bits (114), Expect(3) = 3e-14
Identities = 35/99 (35%), Positives = 48/99 (48%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R KTEYM FS +E V S + + + L L G
Sbjct: 284 QTLESKGFRLSRTKTEYMMCGFSTTRCEEEEV--SLDGQVVPRKDTFWYLGSLLQEDGGI 341
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KT 14
+ HRIK W KWR AS + C+ ++P +L GK +T
Sbjct: 342 DEDV-NHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRT 379
Score = 28.1 bits (61), Expect(3) = 3e-14
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVSRGAIT 548
K YDK ++WW LEK +V IT
Sbjct: 175 KAYDKIPRNVMWWALEKHKVPAKYIT 200
>gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 50.4 bits (119), Expect(3) = 9e-14
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L M+E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCM 760
Score = 47.4 bits (111), Expect(3) = 9e-14
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAMRYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 881
Score = 27.3 bits (59), Expect(3) = 9e-14
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|ONM11203.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 50.8 bits (120), Expect(3) = 1e-13
Identities = 36/100 (36%), Positives = 51/100 (51%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 326 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKEGDI- 383
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+H++P +L GK +TA
Sbjct: 384 -DEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTA 422
Score = 46.6 bits (109), Expect(3) = 1e-13
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ +PW +
Sbjct: 265 FPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCM 301
Score = 27.3 bits (59), Expect(3) = 1e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 217 KAYDKVPRSVMWWALEKHKVA 237
>gb|KYP77525.1| Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 366
Score = 51.2 bits (121), Expect(3) = 3e-13
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ALE GFRI R+KTEY+ FSG + + + + + S + L + +G
Sbjct: 133 QALETYGFRISRSKTEYIKCKFSGRDADSRSEVKLGDHPMREVTSFKY-LGTIIQNNGEI 191
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+ HRI+ W KWR AS V C+ K+P++L GK +TA
Sbjct: 192 EEDV-NHRIQAGWMKWRKASGVICDKKVPLKLKGKFYRTA 230
Score = 48.1 bits (113), Expect(3) = 3e-13
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -1
Query: 491 QLGVRELFPITIGLHKRLALSPHLFSLDMNEITQHIQDNVP 369
Q V + FPITIGLH+ ALSP+LF+L ++ +T+HIQ+ VP
Sbjct: 65 QGSVTKDFPITIGLHQGSALSPYLFNLVLDVLTEHIQEAVP 105
Score = 23.9 bits (50), Expect(3) = 3e-13
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEV 566
K YD+ E++W LEKK V
Sbjct: 24 KAYDRVPREVLWKALEKKGV 43
>gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1038
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 746 FPINIGLHQGSALSPYLFTLVIDEVTRDIQGDIPWCM 782
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 36/100 (36%), Positives = 49/100 (49%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS D V + K + + S L
Sbjct: 807 KTLEAKGFRLSRSKTEYMKCDFSATGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 864
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK KTA
Sbjct: 865 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYKTA 903
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 698 KAYDKVPRSVMWWALEKHKVA 718
>gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 760
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 881
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 760
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 881
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|AQK65817.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 760
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 881
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|ONM32720.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 760
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 881
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 760
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 881
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 760
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 881
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|ONM29620.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 934
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 642 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 678
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 703 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 760
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 761 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 799
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 594 KAYDKVPRSVMWWALEKHKVA 614
>gb|AQK46390.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 48.9 bits (115), Expect(3) = 4e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 265 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 301
Score = 46.6 bits (109), Expect(3) = 4e-13
Identities = 35/100 (35%), Positives = 50/100 (50%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 326 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 383
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+ ++P +L GK +TA
Sbjct: 384 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTA 422
Score = 27.3 bits (59), Expect(3) = 4e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 217 KAYDKVPRSVMWWALEKHKVA 237
>gb|AQK78972.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 634
Score = 49.3 bits (116), Expect(3) = 7e-13
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI +GLH+ ALSP+LF+L M+E+T+ IQ ++PW +
Sbjct: 365 FPIKVGLHQGSALSPYLFALVMDEVTRDIQRDIPWCM 401
Score = 44.3 bits (103), Expect(3) = 7e-13
Identities = 36/97 (37%), Positives = 45/97 (46%)
Frame = -2
Query: 304 LEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW*GQ 125
LE GFR+ R KTEYM FS D V +TK + + S L
Sbjct: 428 LESKGFRLSRIKTEYMICGFSVARHEDGDVSLDGQ-VVTKKDTFRYLGSMLQKDGDIDED 486
Query: 124 GRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KT 14
R HRI W KWR AS V C+ ++P +L GK +T
Sbjct: 487 VR--HRISADWLKWRQASGVLCDKRVPQKLKGKFYRT 521
Score = 28.5 bits (62), Expect(3) = 7e-13
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVSRGAIT 548
K YDK + ++WW LEK + IT
Sbjct: 317 KAYDKVLRNVMWWALEKHKAPTKYIT 342
>gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 54.7 bits (130), Expect(2) = 2e-12
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + G ++ +C + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSAM-GYEDGDVCLDGQVVPKKDTFRYLGSMLQKEGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+H++P +L GK +TA
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTA 881
Score = 46.6 bits (109), Expect(2) = 2e-12
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ +PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCM 760
>gb|ONM55518.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 822
Score = 54.7 bits (130), Expect(2) = 2e-12
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + G ++ +C + K + + S L
Sbjct: 591 QTLEAKGFRLSRSKTEYMKCDFSAM-GYEDGDVCLDGQVVPKKDTFRYLGSMLQKEGDI- 648
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+H++P +L GK +TA
Sbjct: 649 -DEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTA 687
Score = 46.6 bits (109), Expect(2) = 2e-12
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ +PW +
Sbjct: 530 FPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCM 566
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 55.5 bits (132), Expect(2) = 2e-12
Identities = 35/100 (35%), Positives = 55/100 (55%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ALE GFR+ R+KT+YM NFSG R + + + + + S + +
Sbjct: 398 QALEAYGFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEI- 456
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+ +HRI+ W KWR AS+V C+ K+P++L GK +TA
Sbjct: 457 -EADVSHRIQAGWLKWRRASSVLCDKKVPLKLTGKFYRTA 495
Score = 45.8 bits (107), Expect(2) = 2e-12
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = -1
Query: 491 QLGVRELFPITIGLHKRLALSPHLFSLDMNEITQHIQDNVP 369
Q G E FPITIGLH+ L+P+LF+L ++ +T+HIQ+ P
Sbjct: 330 QDGTTEDFPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAP 370
>gb|AQK84025.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 48.9 bits (115), Expect(3) = 2e-12
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ ++PW +
Sbjct: 724 FPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCM 760
Score = 44.3 bits (103), Expect(3) = 2e-12
Identities = 34/99 (34%), Positives = 48/99 (48%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS D V + K + + S L
Sbjct: 785 QTLEAKGFRLSRSKTEYMKCDFSATGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKDGDI- 842
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KT 14
+HRIK W KWR A+ V C+ ++P +L GK +T
Sbjct: 843 -DEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRT 880
Score = 27.3 bits (59), Expect(3) = 2e-12
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 625 KTYDKSI*EIIWWVLEKKEVS 563
K YDK ++WW LEK +V+
Sbjct: 676 KAYDKVPRSVMWWALEKHKVA 696
>gb|AQK69444.1| Nuclear pore complex protein NUP205 [Zea mays]
Length = 2527
Score = 50.8 bits (120), Expect(2) = 2e-11
Identities = 36/100 (36%), Positives = 51/100 (51%)
Frame = -2
Query: 310 EALEYTGFRI*RNKTEYMHSNFSGIEGRDEYVLCSTN*WLTKTLS*PFSLSRLNH*SGW* 131
+ LE GFR+ R+KTEYM +FS + D V + K + + S L
Sbjct: 2296 QTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDGQ-VVPKKDTFRYLGSMLQKEGDI- 2353
Query: 130 GQGRWAHRIKT*W*KWRSASAVTCNHKMPMELNGKV*KTA 11
+HRIK W KWR A+ V C+H++P +L GK +TA
Sbjct: 2354 -DEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTA 2392
Score = 46.6 bits (109), Expect(2) = 2e-11
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = -1
Query: 470 FPITIGLHKRLALSPHLFSLDMNEITQHIQDNVPWLL 360
FPI IGLH+ ALSP+LF+L ++E+T+ IQ +PW +
Sbjct: 2235 FPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCM 2271