BLASTX nr result

ID: Ophiopogon23_contig00028408 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00028408
         (430 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258779.1| ethylene-responsive transcription factor RAP...    72   3e-12

>ref|XP_020258779.1| ethylene-responsive transcription factor RAP2-4-like [Asparagus
           officinalis]
          Length = 268

 Score = 72.0 bits (175), Expect = 3e-12
 Identities = 48/97 (49%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
 Frame = +1

Query: 64  MTTAIDMYKRNSS--SKSSVDPANGELMMALQPFIKXXXXXXXXXXXXXXXXXXXXFY-D 234
           M TAIDMYKRN +  S SSVDP NGELM ALQPFIK                     Y  
Sbjct: 1   MATAIDMYKRNRNRTSSSSVDPLNGELMNALQPFIKSASNSSSSSSSSVPQIPSFPTYPS 60

Query: 235 QSCNL----YDQSCNLYGQNLYFDQFSNQFALPNLSP 333
           Q+ N     +DQS N Y QN  F   + QFALPNLSP
Sbjct: 61  QNPNFGYISFDQSPNFYHQNQTFHLSTGQFALPNLSP 97


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