BLASTX nr result
ID: Ophiopogon23_contig00028254
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00028254
(600 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus... 176 3e-47
ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp... 176 3e-47
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 77 6e-13
dbj|BAS77021.1| Os02g0152700, partial [Oryza sativa Japonica Group] 76 1e-12
gb|OAY65183.1| DNA-directed RNA polymerase V subunit 1, partial ... 76 2e-12
ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana... 76 2e-12
ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V sub... 76 2e-12
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 76 2e-12
ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Set... 76 2e-12
gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria ital... 76 2e-12
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 75 5e-12
gb|PAN04046.1| hypothetical protein PAHAL_A00310 [Panicum hallii] 74 7e-12
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub... 74 9e-12
ref|XP_003627838.2| DNA-directed RNA polymerase [Medicago trunca... 73 2e-11
ref|XP_015936864.1| DNA-directed RNA polymerase V subunit 1 isof... 72 4e-11
ref|XP_015936863.1| DNA-directed RNA polymerase V subunit 1 isof... 72 4e-11
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ... 71 8e-11
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub... 66 5e-09
gb|EFH56098.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] 65 7e-09
ref|XP_020884618.1| DNA-directed RNA polymerase V subunit 1 [Ara... 65 7e-09
>gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus officinalis]
Length = 1833
Score = 176 bits (445), Expect = 3e-47
Identities = 95/203 (46%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Frame = +2
Query: 32 NESSWIAKKSGGNTSG--QSENVEKDAWSAKSLESGCNQKAENQENLTWTAKKPEVDSLP 205
NE+SW +K +S + + E +AW S + K +WT +KP+ +
Sbjct: 1500 NEASWTPRKPETQSSSPWKKDTSEDNAWQTSSEKKPWTDKTNES---SWTPRKPDTQTSS 1556
Query: 206 GGNE--SEGQAWTTRA---------TEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXX 352
NE SE + W+T +E K+SPGWNE G NPW AKTPE+ +P
Sbjct: 1557 PWNENSSEKKGWSTNGVDSVLGGNESEVKASPGWNEGGENPWTAKTPEVETPNVAWGGRG 1616
Query: 353 XXXXXXXXXXXX-FNDRRGPKNNSPRPPASGRPEDRGGWRRAEAFTTEEEKILVDVEPIM 529
F+DRRG +NNSPRPP GR +DRG WRRAE FTTEEEKILVD+EPIM
Sbjct: 1617 KQGWKSQGRGSSSFSDRRGGRNNSPRPPGPGRSDDRGSWRRAETFTTEEEKILVDIEPIM 1676
Query: 530 NSIRKILRESSDGSRVSPEDQKF 598
NSIRKILRE+SDG+RVSP D+KF
Sbjct: 1677 NSIRKILREASDGNRVSPMDEKF 1699
>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
Length = 1945
Score = 176 bits (445), Expect = 3e-47
Identities = 95/203 (46%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Frame = +2
Query: 32 NESSWIAKKSGGNTSG--QSENVEKDAWSAKSLESGCNQKAENQENLTWTAKKPEVDSLP 205
NE+SW +K +S + + E +AW S + K +WT +KP+ +
Sbjct: 1612 NEASWTPRKPETQSSSPWKKDTSEDNAWQTSSEKKPWTDKTNES---SWTPRKPDTQTSS 1668
Query: 206 GGNE--SEGQAWTTRA---------TEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXX 352
NE SE + W+T +E K+SPGWNE G NPW AKTPE+ +P
Sbjct: 1669 PWNENSSEKKGWSTNGVDSVLGGNESEVKASPGWNEGGENPWTAKTPEVETPNVAWGGRG 1728
Query: 353 XXXXXXXXXXXX-FNDRRGPKNNSPRPPASGRPEDRGGWRRAEAFTTEEEKILVDVEPIM 529
F+DRRG +NNSPRPP GR +DRG WRRAE FTTEEEKILVD+EPIM
Sbjct: 1729 KQGWKSQGRGSSSFSDRRGGRNNSPRPPGPGRSDDRGSWRRAETFTTEEEKILVDIEPIM 1788
Query: 530 NSIRKILRESSDGSRVSPEDQKF 598
NSIRKILRE+SDG+RVSP D+KF
Sbjct: 1789 NSIRKILREASDGNRVSPMDEKF 1811
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Oryza
brachyantha]
Length = 1993
Score = 77.4 bits (189), Expect = 6e-13
Identities = 67/196 (34%), Positives = 88/196 (44%)
Frame = +2
Query: 11 GWKRNRENESSWIAKKSGGNTSGQSENVEKDAWSAKSLESGCNQKAENQENLTWTAKKPE 190
GW +R + S +S GN + + AW+A + +QEN K+P
Sbjct: 1686 GWNSSRAEDLSRKDNESWGNVASSPSD---SAWNAAPV---------SQENKNSDTKQP- 1732
Query: 191 VDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXX 370
S G N S+ + + + S GW GGN W + G P
Sbjct: 1733 -GSWDGWNSSQADEPSNKDWK---SDGWGARGGN-WRGQRSNPGRPPRK----------- 1776
Query: 371 XXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAFTTEEEKILVDVEPIMNSIRKIL 550
+D RGP PR RP+DRG RR T EEEKIL ++EPI+ SIRKI
Sbjct: 1777 -------SDGRGP----PR-----RPDDRGPPRRHFDLTPEEEKILGEIEPIVLSIRKIF 1820
Query: 551 RESSDGSRVSPEDQKF 598
RES DG R+S ED+KF
Sbjct: 1821 RESIDGIRLSLEDEKF 1836
>dbj|BAS77021.1| Os02g0152700, partial [Oryza sativa Japonica Group]
Length = 416
Score = 75.9 bits (185), Expect = 1e-12
Identities = 63/209 (30%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Frame = +2
Query: 32 NESSW-IAKKSGGNTSGQSENVEK-DAWSAKSLESGCNQKAENQENL-------TWTA-- 178
++S+W A S GN S ++ + D W + +++ N+ E+ N+ W A
Sbjct: 101 SDSAWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESWGNVPASPSDSAWNAAP 160
Query: 179 --KKPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXX 352
+ +V + NES + W S GW GGN W
Sbjct: 161 VSQGDDVWNSAEANESRNKDW--------KSDGWGARGGN-W------------------ 193
Query: 353 XXXXXXXXXXXXFNDRRGPKNNSPRPPASG-------RPEDRGGWRRAEAFTTEEEKILV 511
RG +NN RPP RP++RG RR T EEEKIL
Sbjct: 194 ----------------RGQRNNPGRPPRKPDGRGLPRRPDERGPPRRHFDLTAEEEKILG 237
Query: 512 DVEPIMNSIRKILRESSDGSRVSPEDQKF 598
++EP + SIRKI RES D ++SPED+KF
Sbjct: 238 EIEPTVLSIRKIFRESIDSIKLSPEDEKF 266
>gb|OAY65183.1| DNA-directed RNA polymerase V subunit 1, partial [Ananas comosus]
Length = 800
Score = 75.9 bits (185), Expect = 2e-12
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Frame = +2
Query: 5 DSGWKRNRENESSWIAKKSGGNTSGQSEN--VEK---DAWSAKSLESGCNQKAENQENLT 169
++ W N ++ + KS G S N ++K ++ + ++ N ++ N+
Sbjct: 508 ENRWNDNVVSDHANETWKSDGWCSSNPTNWGIQKNHPESCDIREIDDQWNSNVTSKPNV- 566
Query: 170 WTAKKPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXX 349
W ++K E + L N + ++ S GW + + W GS
Sbjct: 567 WDSQKSE-EKLLDANRWNDNKTSDNDSQTMKSDGWGPNKSDGW-------GSSNKSDGWG 618
Query: 350 XXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW-------RRAEAFTTEEEKIL 508
+R+G KN S RPP E +GG RR ++FT EEEKIL
Sbjct: 619 SSNKSDGWGSSLNPQNRKGQKNQSKRPPRKP-DEAKGGTIGFTSTGRRLDSFTAEEEKIL 677
Query: 509 VDVEPIMNSIRKILRESSDGSRVSPEDQKF 598
V+VEP M++I++ILR+SSDG ++S +D KF
Sbjct: 678 VEVEPTMHNIKRILRDSSDGEKLSEDDGKF 707
>ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus]
Length = 1800
Score = 75.9 bits (185), Expect = 2e-12
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Frame = +2
Query: 5 DSGWKRNRENESSWIAKKSGGNTSGQSEN--VEK---DAWSAKSLESGCNQKAENQENLT 169
++ W N ++ + KS G S N ++K ++ + ++ N ++ N+
Sbjct: 1508 ENRWNDNVVSDHANETWKSDGWCSSNPTNWGIQKNHPESCDIREIDDQWNSNVTSKPNV- 1566
Query: 170 WTAKKPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXX 349
W ++K E + L N + ++ S GW + + W GS
Sbjct: 1567 WDSQKSE-EKLLDANRWNDNKTSDNDSQTMKSDGWGPNKSDGW-------GSSNKSDGWG 1618
Query: 350 XXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW-------RRAEAFTTEEEKIL 508
+R+G KN S RPP E +GG RR ++FT EEEKIL
Sbjct: 1619 SSNKSDGWGSSLNPQNRKGQKNQSKRPPRKP-DEAKGGTIGFTSTGRRLDSFTAEEEKIL 1677
Query: 509 VDVEPIMNSIRKILRESSDGSRVSPEDQKF 598
V+VEP M++I++ILR+SSDG ++S +D KF
Sbjct: 1678 VEVEPTMHNIKRILRDSSDGEKLSEDDGKF 1707
>ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Oryza sativa
Japonica Group]
Length = 1962
Score = 75.9 bits (185), Expect = 2e-12
Identities = 63/209 (30%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Frame = +2
Query: 32 NESSW-IAKKSGGNTSGQSENVEK-DAWSAKSLESGCNQKAENQENL-------TWTA-- 178
++S+W A S GN S ++ + D W + +++ N+ E+ N+ W A
Sbjct: 1647 SDSAWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESWGNVPASPSDSAWNAAP 1706
Query: 179 --KKPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXX 352
+ +V + NES + W S GW GGN W
Sbjct: 1707 VSQGDDVWNSAEANESRNKDW--------KSDGWGARGGN-W------------------ 1739
Query: 353 XXXXXXXXXXXXFNDRRGPKNNSPRPPASG-------RPEDRGGWRRAEAFTTEEEKILV 511
RG +NN RPP RP++RG RR T EEEKIL
Sbjct: 1740 ----------------RGQRNNPGRPPRKPDGRGLPRRPDERGPPRRHFDLTAEEEKILG 1783
Query: 512 DVEPIMNSIRKILRESSDGSRVSPEDQKF 598
++EP + SIRKI RES D ++SPED+KF
Sbjct: 1784 EIEPTVLSIRKIFRESIDSIKLSPEDEKF 1812
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 75.9 bits (185), Expect = 2e-12
Identities = 63/209 (30%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Frame = +2
Query: 32 NESSW-IAKKSGGNTSGQSENVEK-DAWSAKSLESGCNQKAENQENL-------TWTA-- 178
++S+W A S GN S ++ + D W + +++ N+ E+ N+ W A
Sbjct: 1702 SDSAWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESWGNVPASPSDSAWNAAP 1761
Query: 179 --KKPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXX 352
+ +V + NES + W S GW GGN W
Sbjct: 1762 VSQGDDVWNSAEANESRNKDW--------KSDGWGARGGN-W------------------ 1794
Query: 353 XXXXXXXXXXXXFNDRRGPKNNSPRPPASG-------RPEDRGGWRRAEAFTTEEEKILV 511
RG +NN RPP RP++RG RR T EEEKIL
Sbjct: 1795 ----------------RGQRNNPGRPPRKPDGRGLPRRPDERGPPRRHFDLTAEEEKILG 1838
Query: 512 DVEPIMNSIRKILRESSDGSRVSPEDQKF 598
++EP + SIRKI RES D ++SPED+KF
Sbjct: 1839 EIEPTVLSIRKIFRESIDSIKLSPEDEKF 1867
>ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Setaria italica]
Length = 2038
Score = 75.9 bits (185), Expect = 2e-12
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Frame = +2
Query: 14 WKRNRENESSW----IAKKSGGNTSGQSENVEKDAWSAKSLESGCNQKA---------EN 154
W + NESSW + S GN++ + N ++ +W +++ +Q+ +N
Sbjct: 1609 WNTGKSNESSWEKTDALQDSWGNSAADNNNTQEGSWDKIAVKDTNSQQDSWGNVAVQNKN 1668
Query: 155 QENLTW---TAKKPEVDSLPG-GNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIG 322
+N +W K P D+ GN + A + A ++ S GWN + K E
Sbjct: 1669 TQNGSWDNGAEKVPTSDAQDSWGNLAATPAGNSDAKQSDSWDGWNAAPAENSQGKCNETT 1728
Query: 323 SPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAF--TTEE 496
+ G +NNS RPP P++RG + F T EE
Sbjct: 1729 DSGDNKGWKSEGWGGKS------GNWSGQRNNSGRPPRG--PDERGPPPPRQRFELTAEE 1780
Query: 497 EKILVDVEPIMNSIRKILRESSDGSRVSPEDQKF 598
+ IL+++EPIM +R+I RE+ +G R+ PED+KF
Sbjct: 1781 KNILLEIEPIMMRVRRIFREACNGVRLQPEDEKF 1814
>gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria italica]
Length = 2050
Score = 75.9 bits (185), Expect = 2e-12
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Frame = +2
Query: 14 WKRNRENESSW----IAKKSGGNTSGQSENVEKDAWSAKSLESGCNQKA---------EN 154
W + NESSW + S GN++ + N ++ +W +++ +Q+ +N
Sbjct: 1621 WNTGKSNESSWEKTDALQDSWGNSAADNNNTQEGSWDKIAVKDTNSQQDSWGNVAVQNKN 1680
Query: 155 QENLTW---TAKKPEVDSLPG-GNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIG 322
+N +W K P D+ GN + A + A ++ S GWN + K E
Sbjct: 1681 TQNGSWDNGAEKVPTSDAQDSWGNLAATPAGNSDAKQSDSWDGWNAAPAENSQGKCNETT 1740
Query: 323 SPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAF--TTEE 496
+ G +NNS RPP P++RG + F T EE
Sbjct: 1741 DSGDNKGWKSEGWGGKS------GNWSGQRNNSGRPPRG--PDERGPPPPRQRFELTAEE 1792
Query: 497 EKILVDVEPIMNSIRKILRESSDGSRVSPEDQKF 598
+ IL+++EPIM +R+I RE+ +G R+ PED+KF
Sbjct: 1793 KNILLEIEPIMMRVRRIFREACNGVRLQPEDEKF 1826
>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1-like [Phoenix dactylifera]
Length = 1656
Score = 74.7 bits (182), Expect = 5e-12
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Frame = +2
Query: 11 GWKRNRENESS--W---IAKKS--GGNTSGQSENVEKDAWSAKSLESGCNQKAENQENLT 169
GW E+ + W I +KS NT S + + W +S + N+ ++
Sbjct: 1418 GWNHVTESPAKPVWDTNITRKSHEADNTWNTSAFSKSNVWDGQSFDKVHNEGSD------ 1471
Query: 170 WTAKKPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXX 349
GG +E QA T R ++ S GWN S
Sbjct: 1472 ------------GGRWNENQA-TDRKNQSWKSHGWNSSNAT------------------- 1499
Query: 350 XXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW----------RRAEAFTTEEE 499
DRR +N S + + G P++R GW RR ++FT EEE
Sbjct: 1500 ---------------DRRTQRNYSNK--SLGMPDNRKGWNPNSLLTSTGRRLDSFTVEEE 1542
Query: 500 KILVDVEPIMNSIRKILRESSDGSRVSPEDQKF 598
+ILV++EP M +IR+ILRESSDG ++S +DQKF
Sbjct: 1543 RILVEIEPTMQTIRRILRESSDGDQLSADDQKF 1575
>gb|PAN04046.1| hypothetical protein PAHAL_A00310 [Panicum hallii]
Length = 1978
Score = 74.3 bits (181), Expect = 7e-12
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Frame = +2
Query: 14 WKRNRENESSW----IAKKSGGNTSGQSENVEKDAWSAKSLESGCNQKAENQENLTWTAK 181
W + NE +W + S G ++ + N+++ +W +L + N + ++ N+
Sbjct: 1595 WSTGKSNERAWGKTDALQDSWGKSAADNNNMQEGSWDKIAL-TDTNSQQDSWGNVAIQ-- 1651
Query: 182 KPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXX 361
N + +W A + ++S +S GN +A TP +
Sbjct: 1652 ---------NNNTLNDSWENGAEKVQTSAA-EDSWGN--LAATPAGNADAKQSDSGNSKG 1699
Query: 362 XXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAF--TTEEEKILVDVEPIMNS 535
+ G +NNS RPP RP++RG + F TTEE+ IL +VEPI+
Sbjct: 1700 WKSDGWGGKSGNWSGQRNNSGRPPR--RPDERGPPPPRQRFELTTEEKNILKEVEPILMR 1757
Query: 536 IRKILRESSDGSRVSPEDQKF 598
+R+I RE+SDG R+ PED+KF
Sbjct: 1758 VRRISREASDGVRLQPEDEKF 1778
>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
Length = 1708
Score = 73.9 bits (180), Expect = 9e-12
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Frame = +2
Query: 101 DAWSAKSLESGCNQKAENQENLTW----TAKKPEVDSLPGGNE-SEGQAWTTRATEAKSS 265
D S S + G N E+ W T K D+ + S+ W +++ + +
Sbjct: 1450 DTTSNSSTQDGWNHVKESPAKPVWDTNVTRKSHGADNTWNTSAFSKSNVWDSQSFDKVHN 1509
Query: 266 PGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGR 445
GW+ G W + DRR +N S + ++G
Sbjct: 1510 EGWD---GGKW--------NENQVPDHKNQSWKSRSWNSSNATDRRTQRNLSNK--SAGT 1556
Query: 446 PEDRGGW----------RRAEAFTTEEEKILVDVEPIMNSIRKILRESSDGSRVSPEDQK 595
+DR GW RR ++FT EEE+ILV++EP M +IR+ILRESSDG R+S +DQK
Sbjct: 1557 SDDRKGWNSNSMMTSTRRRLDSFTVEEERILVEIEPTMQTIRRILRESSDGDRLSADDQK 1616
Query: 596 F 598
F
Sbjct: 1617 F 1617
>ref|XP_003627838.2| DNA-directed RNA polymerase [Medicago truncatula]
gb|AET02314.2| DNA-directed RNA polymerase [Medicago truncatula]
Length = 2010
Score = 72.8 bits (177), Expect = 2e-11
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Frame = +2
Query: 8 SGWKRNREN-ESSWIAKKSGGNTS-GQSENVEKDAWSAKSLESGCNQKAENQENLTWTAK 181
+ W++ EN + SW+AK N+S G++++ E W +K+ + K +QEN W +K
Sbjct: 1645 NAWEQKPENVKDSWVAKVPVANSSWGKAKSPENRPWDSKNEPNNSFGKPNSQENEPWDSK 1704
Query: 182 KPEVDSLPGGNESEGQAWTTRATEAKSSPGWNESGGN-PWVAKTPE---IGSPTXXXXXX 349
S E Q W ++ E+ SS G +S N PW +K GS
Sbjct: 1705 NESDSSWGKPKSQESQPWDSK-NESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVA 1763
Query: 350 XXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWR-----------RAEAFTTEE 496
R K N SG P + G W+ R E +T EE
Sbjct: 1764 SANSESDKSFQWGKQGRDSFKKNRFEGSQSGGP-NAGDWKNRSRPVRPPGQRFELYTPEE 1822
Query: 497 EKILVDVEPIMNSIRKI--LRESSDGSRVSPEDQKF 598
+ I+ D+EPI+ SIR+I L+ +DG ++ EDQK+
Sbjct: 1823 QDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKY 1858
>ref|XP_015936864.1| DNA-directed RNA polymerase V subunit 1 isoform X2 [Arachis
duranensis]
Length = 2130
Score = 72.0 bits (175), Expect = 4e-11
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Frame = +2
Query: 26 RENE-SSWIAKKSGGNTSGQSEN--VEKDAWSAKSLESGCNQKAENQENLTWTAKKPEVD 196
R NE SSW + + G + VE +AW+ KS NQ E + N W AKKP +
Sbjct: 1814 RSNEWSSWGSNNNKGEPKVGDDGIPVESNAWAHKSENVNVNQSKEIESN--WDAKKPVDN 1871
Query: 197 SLPGGNES-EGQAWTTR--ATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXX 367
S G +S E + W T+ + +A SS GW + A S
Sbjct: 1872 SSWGRPKSQEDRPWNTQNDSNQAASSQGWESQIAS---ANADSDKSFQWGKRGRESFKKN 1928
Query: 368 XXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAFTTEEEKILVDVEPIMNSIRKI 547
+ G + N RPP R R + +T+EE+++L D+EPIM SIR+I
Sbjct: 1929 RFEGSQGWGSNSGDRQNKSRPP-------RTPGSRLDIYTSEEQEVLKDIEPIMQSIRRI 1981
Query: 548 LRES--SDGSRVSPEDQKF 598
+++ +DG ++ +DQ F
Sbjct: 1982 MQQEGYNDGDPLAADDQTF 2000
>ref|XP_015936863.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Arachis
duranensis]
Length = 2131
Score = 72.0 bits (175), Expect = 4e-11
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Frame = +2
Query: 26 RENE-SSWIAKKSGGNTSGQSEN--VEKDAWSAKSLESGCNQKAENQENLTWTAKKPEVD 196
R NE SSW + + G + VE +AW+ KS NQ E + N W AKKP +
Sbjct: 1815 RSNEWSSWGSNNNKGEPKVGDDGIPVESNAWAHKSENVNVNQSKEIESN--WDAKKPVDN 1872
Query: 197 SLPGGNES-EGQAWTTR--ATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXX 367
S G +S E + W T+ + +A SS GW + A S
Sbjct: 1873 SSWGRPKSQEDRPWNTQNDSNQAASSQGWESQIAS---ANADSDKSFQWGKRGRESFKKN 1929
Query: 368 XXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGWRRAEAFTTEEEKILVDVEPIMNSIRKI 547
+ G + N RPP R R + +T+EE+++L D+EPIM SIR+I
Sbjct: 1930 RFEGSQGWGSNSGDRQNKSRPP-------RTPGSRLDIYTSEEQEVLKDIEPIMQSIRRI 1982
Query: 548 LRES--SDGSRVSPEDQKF 598
+++ +DG ++ +DQ F
Sbjct: 1983 MQQEGYNDGDPLAADDQTF 2001
>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
Length = 1673
Score = 71.2 bits (173), Expect = 8e-11
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Frame = +2
Query: 101 DAWSAKSLESGCNQKAENQENLTW----TAKKPEVDSLPGGNE-SEGQAWTTRATEAKSS 265
D+ S S + G N E+ W T K E D+ + S+ W +++ + S
Sbjct: 1450 DSTSKSSTQDGWNHVKESPAKPVWDTNVTRKSHEADNTWNTSAFSKSNVWGSQSFDKVHS 1509
Query: 266 PG-----WNESG-----GNPWVAKTPEIGSPTXXXXXXXXXXXXXXXXXXXFNDRRGPKN 415
G WNE+ W ++ + T DRR +N
Sbjct: 1510 EGSDGGRWNENQVPDRKNQSWKSRGWNSSNAT---------------------DRRTQRN 1548
Query: 416 NSPRPPASGRPEDRGGW----------RRAEAFTTEEEKILVDVEPIMNSIRKILRESSD 565
+S + + +DR GW RR ++FT EEE+IL+++EP M +IR+ILRESSD
Sbjct: 1549 HSNKSAMTS--DDRKGWNSNSMMTSTRRRLDSFTVEEERILIEIEPTMQTIRRILRESSD 1606
Query: 566 GSRVSPEDQKF 598
G ++S +DQKF
Sbjct: 1607 GDQLSADDQKF 1617
>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 1738
Score = 65.9 bits (159), Expect = 5e-09
Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 28/214 (13%)
Frame = +2
Query: 41 SWIAKKSG-----GNTSGQSENVEKDAWSAK-----SLESGCNQKAENQENLTWTAKKPE 190
+W ++ SG N + N+ +D W ++ + + N + W+ +
Sbjct: 1466 TWSSQSSGKPWGQDNANNTKRNIAQDGWRCAESPVTNIWDSTSTRNANVSDSQWSGNPSK 1525
Query: 191 -VDSLPGGNESE--------GQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXX 343
+D GN+S G +T T + WN G W + P
Sbjct: 1526 NLDIQWDGNDSNKDLDSQWCGNVTSTSNTSEGRNQSWNSRG---WGSANPP--------- 1573
Query: 344 XXXXXXXXXXXXXXXFNDRRGPKNNSPRPPASGRPEDRGGW---------RRAEAFTTEE 496
R+ K S R P G+ + GW RR E+ T EE
Sbjct: 1574 -----------------GRKNQKTFSARFP--GKSASQKGWNSNRALASGRRLESLTAEE 1614
Query: 497 EKILVDVEPIMNSIRKILRESSDGSRVSPEDQKF 598
EKIL +VEP+M +I++IL +SSDG+R+S +DQKF
Sbjct: 1615 EKILAEVEPVMLTIKRILHDSSDGNRLSADDQKF 1648
>gb|EFH56098.1| NRPD1b [Arabidopsis lyrata subsp. lyrata]
Length = 1947
Score = 65.5 bits (158), Expect = 7e-09
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 7/201 (3%)
Frame = +2
Query: 17 KRNRENESSWIAKKSGGNTSGQSENVEKDAWSA--KSLESGCNQKAENQENLTWTAKKPE 190
K N E ES A S + ++E+ AW + + + N+ A + W + K
Sbjct: 1609 KNNSETESDAAAWGSRDKKTSETESGAA-AWGSWGQPTPTAANEDANEDDENPWVSLKET 1667
Query: 191 VDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXX 370
++ E W A + SS GW+ GG W
Sbjct: 1668 KSR--DKDDKERIQWGNPAKKFPSSGGWSNGGGADW------------------------ 1701
Query: 371 XXXXXXFNDRRGPKNNSPRPPASG---RPEDRGGWRRAEAFTTEEEKILVDVEPIMNSIR 541
+G +N++PRPP S P +R ++FT+EE+++L DVEP+M ++R
Sbjct: 1702 ----------KGKRNHTPRPPRSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLR 1751
Query: 542 KILRESS--DGSRVSPEDQKF 598
KI+ S+ DG +S +D+ F
Sbjct: 1752 KIMHPSAYPDGDPISDDDKTF 1772
>ref|XP_020884618.1| DNA-directed RNA polymerase V subunit 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 1964
Score = 65.5 bits (158), Expect = 7e-09
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 7/201 (3%)
Frame = +2
Query: 17 KRNRENESSWIAKKSGGNTSGQSENVEKDAWSA--KSLESGCNQKAENQENLTWTAKKPE 190
K N E ES A S + ++E+ AW + + + N+ A + W + K
Sbjct: 1626 KNNSETESDAAAWGSRDKKTSETESGAA-AWGSWGQPTPTAANEDANEDDENPWVSLKET 1684
Query: 191 VDSLPGGNESEGQAWTTRATEAKSSPGWNESGGNPWVAKTPEIGSPTXXXXXXXXXXXXX 370
++ E W A + SS GW+ GG W
Sbjct: 1685 KSR--DKDDKERIQWGNPAKKFPSSGGWSNGGGADW------------------------ 1718
Query: 371 XXXXXXFNDRRGPKNNSPRPPASG---RPEDRGGWRRAEAFTTEEEKILVDVEPIMNSIR 541
+G +N++PRPP S P +R ++FT+EE+++L DVEP+M ++R
Sbjct: 1719 ----------KGKRNHTPRPPRSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLR 1768
Query: 542 KILRESS--DGSRVSPEDQKF 598
KI+ S+ DG +S +D+ F
Sbjct: 1769 KIMHPSAYPDGDPISDDDKTF 1789