BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00027495
         (724 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009334344.1| clp protease proteolytic subunit (chloroplas...    49   3e-16
gb|ANY93398.3| ClpP (chloroplast) [Hagenia abyssinica]                 75   2e-12
gb|KJB59961.1| hypothetical protein B456_009G282800, partial [Go...    44   4e-06
ref|WP_082924819.1| hypothetical protein [Paenarthrobacter nicot...    54   7e-06

>ref|YP_009334344.1| clp protease proteolytic subunit (chloroplast) [Agave attenuata]
 gb|APO11154.1| clp protease proteolytic subunit (chloroplast) [Agave attenuata]
          Length = 257

 Score = 49.3 bits (116), Expect(3) = 3e-16
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +3

Query: 654 NIIRVMIHQPASSFYEAQAGEFI 722
           NIIRVMIHQPASSFYEAQAGEFI
Sbjct: 172 NIIRVMIHQPASSFYEAQAGEFI 194



 Score = 48.1 bits (113), Expect(3) = 3e-16
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +2

Query: 503 KKCHCRAVCNAQKMPVRLFHSIC 571
           +K HCRAVCNAQKMPVRLF+SIC
Sbjct: 121 RKFHCRAVCNAQKMPVRLFNSIC 143



 Score = 35.8 bits (81), Expect(3) = 3e-16
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +1

Query: 607 AQSCKIEEPFMHDVIS 654
           AQSC+IEEPFMHDVIS
Sbjct: 156 AQSCEIEEPFMHDVIS 171


>gb|ANY93398.3| ClpP (chloroplast) [Hagenia abyssinica]
          Length = 283

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 45/75 (60%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +3

Query: 507 NAIAEPYAMHKRCLYGCSIL-FVFFSSCFFIPYFSPILQDRRTVHA*CYIN--IIRVMIH 677
           N+I EPYAM KRCLYGCSIL F+ F    ++P F      R   H   YI   IIRVMIH
Sbjct: 158 NSIREPYAMRKRCLYGCSILPFLIF---LYLPTFH-FHHAREKKHFLGYIRYYIIRVMIH 213

Query: 678 QPASSFYEAQAGEFI 722
           QPASSFYEAQ GEF+
Sbjct: 214 QPASSFYEAQTGEFV 228


>gb|KJB59961.1| hypothetical protein B456_009G282800, partial [Gossypium raimondii]
          Length = 111

 Score = 43.5 bits (101), Expect(2) = 4e-06
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +3

Query: 660 IRVMIHQPASSFYEAQAGEFI 722
           +RVMIHQPASSFYEAQ GEFI
Sbjct: 38  VRVMIHQPASSFYEAQTGEFI 58



 Score = 35.8 bits (81), Expect(2) = 4e-06
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +2

Query: 500 RKKCHCRAVCNAQKMPVRL 556
           +++ HC+AVCNAQKMPVR+
Sbjct: 22  KREFHCKAVCNAQKMPVRV 40


>ref|WP_082924819.1| hypothetical protein [Paenarthrobacter nicotinovorans]
          Length = 109

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +3

Query: 570 VFFSSCFFIPYFSPILQDRRTVHA*CYINIIRVMIHQPASSFYEAQAGEFI 722
           +F    FFI     I++DR T+   CYI  IRVMIHQPASSFYEAQ GEFI
Sbjct: 9   IFLFLLFFISSPHLIMRDRGTI---CYI--IRVMIHQPASSFYEAQTGEFI 54