BLASTX nr result

ID: Ophiopogon23_contig00027266 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00027266
         (417 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274831.1| 50S ribosomal protein L19-2, chloroplastic-l...   100   1e-23
gb|ONK62107.1| uncharacterized protein A4U43_C07F430 [Asparagus ...   103   5e-23

>ref|XP_020274831.1| 50S ribosomal protein L19-2, chloroplastic-like [Asparagus
           officinalis]
          Length = 211

 Score =  100 bits (249), Expect = 1e-23
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
 Frame = -1

Query: 249 MQSLWRGLNGVRSHLATSKNRQFGISKVCTENKLHIPRELMLSGHGNFQC------TLLR 88
           MQSL R  NG R+HLA SK    G SK+CTENKLH PREL++     F C       LLR
Sbjct: 1   MQSLRRSFNGFRNHLAGSKITLSGTSKICTENKLHTPRELVVCAQQKFHCDIVTRNPLLR 60

Query: 87  YMTTLGYAEPSSGQDSSAASPDVGQPQRI 1
           YMTTLG+ EPS G+DS+  SPD GQP RI
Sbjct: 61  YMTTLGHPEPSPGKDSAVESPDAGQPHRI 89


>gb|ONK62107.1| uncharacterized protein A4U43_C07F430 [Asparagus officinalis]
          Length = 1087

 Score =  103 bits (258), Expect = 5e-23
 Identities = 55/94 (58%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
 Frame = -1

Query: 264  ESLGGMQSLWRGLNGVRSHLATSKNRQFGISKVCTENKLHIPRELMLSGHGNFQC----- 100
            ESL  MQSL R  NG R+HLA SK    G SK+CTENKLH PREL++     F C     
Sbjct: 872  ESLEKMQSLRRSFNGFRNHLAGSKITLSGTSKICTENKLHTPRELVVCAQQKFHCDIVTR 931

Query: 99   -TLLRYMTTLGYAEPSSGQDSSAASPDVGQPQRI 1
              LLRYMTTLG+ EPS G+DS+  SPD GQP RI
Sbjct: 932  NPLLRYMTTLGHPEPSPGKDSAVESPDAGQPHRI 965


Top