BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00026760
         (2836 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondria...  1466   0.0  
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1343   0.0  
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1335   0.0  
ref|XP_020109467.1| DNA-directed RNA polymerase 1B, mitochondria...  1300   0.0  
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1288   0.0  
gb|OAY76980.1| DNA-directed RNA polymerase 2B, chloroplastic/mit...  1281   0.0  
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1268   0.0  
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1268   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1265   0.0  
ref|XP_009394557.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1245   0.0  
ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1243   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1243   0.0  
ref|XP_006660444.2| PREDICTED: DNA-directed RNA polymerase 1B, m...  1239   0.0  
gb|PAN11641.1| hypothetical protein PAHAL_B02160 [Panicum hallii]    1238   0.0  
ref|XP_015612356.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1237   0.0  
ref|XP_015612355.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1237   0.0  
ref|XP_015612354.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1237   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...  1237   0.0  
ref|XP_002461035.2| DNA-directed RNA polymerase 1B, mitochondria...  1229   0.0  
gb|OQU90275.1| hypothetical protein SORBI_3002G378100 [Sorghum b...  1229   0.0  

>ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondrial-like [Asparagus
            officinalis]
 gb|ONK55019.1| uncharacterized protein A4U43_UnF8500 [Asparagus officinalis]
          Length = 1023

 Score = 1466 bits (3795), Expect = 0.0
 Identities = 732/940 (77%), Positives = 802/940 (85%), Gaps = 12/940 (1%)
 Frame = -1

Query: 2785 LMCSTTTLISSHLGPFPIQSHXXXXXXXXXXXXXXP--QMWRTVGRAAPRSSKNLAASIP 2612
            ++CS  TLI S L P PIQ H                 QM+RT+ R  PRS+K L++SIP
Sbjct: 1    MLCSAKTLIPSQLNPLPIQPHPNPFNSISSPNPSQISAQMYRTLARTIPRSTKTLSSSIP 60

Query: 2611 QLSNFLGFSCESLSVHKNPIFGLKAPFRPTSTHLGTRQNLEFC-------PNSGSISRGF 2453
            QLSNF+GF     S HKNPIF L          +G  Q +EF        P +  + R F
Sbjct: 61   QLSNFMGFPQNPSSSHKNPIFTL----------IGNPQKVEFSTFDGILKPLAREVPRFF 110

Query: 2452 TGIRS---LXXXXXXXXXXXSTDADEAAEVQEMLEELKNVQVDSRSGYANGNNNRVRRNL 2282
            TG RS   +           STDADEAAE+QE+LEEL  VQV + +  A+ N NR +RN 
Sbjct: 111  TGTRSFASVAEAEVEVEAASSTDADEAAEIQEILEELSKVQVSTSNNAASENTNR-KRNF 169

Query: 2281 PRTQHRPLGMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLF 2102
             +TQHRPLGMG GKYA+L+RRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLF
Sbjct: 170  EKTQHRPLGMGTGKYAILRRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLF 229

Query: 2101 LGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSV 1922
            LGWFEPF+D I+KE+++C DPKCK SHR YF+KLPA+MMAVITMHKLMSLLMTG GDGSV
Sbjct: 230  LGWFEPFRDAILKERKICEDPKCKASHRAYFNKLPADMMAVITMHKLMSLLMTGVGDGSV 289

Query: 1921 RVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMK 1742
            RVVQAAC VGEAIEQEVRIH+FLEKTKK+P K   N D E DS AKEQE +RKKVTNLMK
Sbjct: 290  RVVQAACHVGEAIEQEVRIHRFLEKTKKKPAKASDNGDGEVDSSAKEQEIIRKKVTNLMK 349

Query: 1741 MNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAF 1562
            M+KLHQVRKIVKGQDD RPWGQEAQAKVGSRLIELLM+TAYIQPPVDQ+A+GPPDIRPAF
Sbjct: 350  MHKLHQVRKIVKGQDDCRPWGQEAQAKVGSRLIELLMDTAYIQPPVDQKAEGPPDIRPAF 409

Query: 1561 RHTLRTITKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAH 1382
            RH+LRT+TKE  K+SRRYGVIECD +VRQGLD+TARHMVIPY+PMLVPP+ WTGYD+G H
Sbjct: 410  RHSLRTVTKEHHKMSRRYGVIECDPIVRQGLDRTARHMVIPYVPMLVPPINWTGYDKGGH 469

Query: 1381 FFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSG 1202
             FLPSYVMR+HG+RQQREAVKRAPKKQLQAVFEALD +GST+WR+NKRVLS+VDRIWSSG
Sbjct: 470  LFLPSYVMRIHGARQQREAVKRAPKKQLQAVFEALDAVGSTRWRINKRVLSIVDRIWSSG 529

Query: 1201 GRLADLIDREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKM 1022
            GRLADL+DR+DIPLPEKP TEDES+            KENSERHSQRCDVELKLAVARKM
Sbjct: 530  GRLADLVDRDDIPLPEKPDTEDESKIKKWKWKLRSAKKENSERHSQRCDVELKLAVARKM 589

Query: 1021 KDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGL 842
            KDEEGFYYPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL GL
Sbjct: 590  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLAGL 649

Query: 841  YGGGVDKLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRS 662
            YGGGVDKLSYDGRIAFTENH+EDIFDSADRPLEGRRWWLGAEDPFQCL VCINLAEALRS
Sbjct: 650  YGGGVDKLSYDGRIAFTENHVEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRS 709

Query: 661  ESPETTISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIM 482
             SPETTISH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVYSGIAARVLDIM
Sbjct: 710  SSPETTISHVPVHQDGSCNGLQHYAALGRDQLGAVAVNLVTGEKPADVYSGIAARVLDIM 769

Query: 481  KRDAAKDPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIE 302
            ++DAAKDPA EP+ALRAKLL+  VDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERGAI 
Sbjct: 770  QQDAAKDPAKEPDALRAKLLVDHVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAIA 829

Query: 301  DESELFSASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQ 122
            DE+ELFSASCY AKTTLIALE+MFQ ARNIMNWLGDCAK+IASENQPVRWTTPLGLPVVQ
Sbjct: 830  DEAELFSASCYAAKTTLIALEQMFQAARNIMNWLGDCAKIIASENQPVRWTTPLGLPVVQ 889

Query: 121  PYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            PYR+LGRHLIKTSLQVLTLQRETDKV+VKRQ+TAFPPNFV
Sbjct: 890  PYRKLGRHLIKTSLQVLTLQRETDKVLVKRQRTAFPPNFV 929


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Phoenix dactylifera]
          Length = 1038

 Score = 1343 bits (3477), Expect = 0.0
 Identities = 677/910 (74%), Positives = 756/910 (83%), Gaps = 18/910 (1%)
 Frame = -1

Query: 2677 QMWRTVGRAAPRSSKNL--------AASIPQLSNFLGFSCESLSVHKNPIFGLKAPFRPT 2522
            +MWR + R A  SS+ L          +IP +S+FLG S +S+   ++ I  L  PF   
Sbjct: 37   EMWRNLARKASSSSRYLDFAGRPSSVPAIPSISSFLGSSQDSICCERSRILDLGTPFSHR 96

Query: 2521 STHLGTRQNLEF-----CPNSGSISRGFTGIRSLXXXXXXXXXXXSTDADEAA----EVQ 2369
            S++ G   N +      CPN  SI R    +              STD DE      E+Q
Sbjct: 97   SSNTGVGHNGDSSPFIRCPNF-SIGRISGRLGDSRFFASVAEAVSSTDVDEDTSSIEEIQ 155

Query: 2368 EMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPL-GMGAGKYAMLKRRQIKIETEAW 2192
             MLEE+  + V   S    GN   VR      Q R + GMG+GKYA+L+RRQI+IETEAW
Sbjct: 156  GMLEEMSKIDVREGSKIG-GNLEEVRPKQQLGQPRMVCGMGSGKYAILRRRQIRIETEAW 214

Query: 2191 EQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQY 2012
            EQAAKEYKELL DMCE+KLAPNLPYVKSLFLGWFEP +D+I  EQ+ C DP+ ++SH  Y
Sbjct: 215  EQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEQCRDPRTRVSHGPY 274

Query: 2011 FDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRP 1832
            F +LPA+MMAVITMHKLMSLLMTG GDG +RVVQAACQ+GEAIE EVRIH+FLEKT+K+ 
Sbjct: 275  FYQLPADMMAVITMHKLMSLLMTGNGDGGIRVVQAACQIGEAIEHEVRIHRFLEKTRKKT 334

Query: 1831 VKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGS 1652
             KDKKNED E  ++ KEQEFLRKKVTNLMK  K+HQVRKIVKGQDDS+PWGQ+AQAKVGS
Sbjct: 335  DKDKKNEDVEGATLTKEQEFLRKKVTNLMKKQKVHQVRKIVKGQDDSKPWGQDAQAKVGS 394

Query: 1651 RLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDMLVRQG 1472
            RLIELLMETAYIQPPV Q ADGPPDIRPAFRH+LRT+TKEQQK SRRYGVIECD LVRQG
Sbjct: 395  RLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSRRYGVIECDPLVRQG 454

Query: 1471 LDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQA 1292
            LD+TARHMVIPYMPMLVPP+ WTGY++G H FLPSY+MR HG+RQQREAV+RAP+K++QA
Sbjct: 455  LDRTARHMVIPYMPMLVPPVNWTGYEKGGHLFLPSYIMRTHGARQQREAVRRAPRKEMQA 514

Query: 1291 VFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXX 1112
            VFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADL+DR+DIPLPEKP TED ++     
Sbjct: 515  VFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLVDRDDIPLPEKPDTEDGAEIRKWK 574

Query: 1111 XXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSS 932
                   KENSE+HSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL+HL S
Sbjct: 575  WKVKSVKKENSEKHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 634

Query: 931  DLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADR 752
            DLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGR+AFTENH++DIFDSADR
Sbjct: 635  DLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRVAFTENHLDDIFDSADR 694

Query: 751  PLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYAALGRD 572
            PLEGRRWWLGAEDPFQCL VCINL+EALRS SPETTISH PVHQDGSCNGLQHYAALGRD
Sbjct: 695  PLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRD 754

Query: 571  EIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVK 392
            ++GA AVNLV GDKP DVYS IAARVL+IM+RDA KDPAT+P+ALRA+LL++QVDRKLVK
Sbjct: 755  KLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPATDPDALRARLLVNQVDRKLVK 814

Query: 391  QTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGARNI 212
            QTVMTSVYGVTYVGAREQIK+RLKERG I D++ELFSASCY AKTTL AL EMFQ AR+I
Sbjct: 815  QTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFSASCYAAKTTLTALGEMFQAARSI 874

Query: 211  MNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKR 32
            M+WLGDCAK+IASENQPVRWTTPLGLPVVQPYR LGRHLIKTSLQVLTLQRETDKVMVKR
Sbjct: 875  MSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQRETDKVMVKR 934

Query: 31   QKTAFPPNFV 2
            Q+TAFPPNFV
Sbjct: 935  QRTAFPPNFV 944


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 1335 bits (3456), Expect = 0.0
 Identities = 671/910 (73%), Positives = 758/910 (83%), Gaps = 18/910 (1%)
 Frame = -1

Query: 2677 QMWRTVGRAAPRSSKNLA--------ASIPQLSNFLGFSCESLSVHKNPIFGLKAPFRPT 2522
            +MWR +   A  SS+ L          +IP +S+F+G + +S+S  ++ I  L APF   
Sbjct: 37   EMWRNLATKASSSSRYLGFAGRPSSVPAIPSISSFIGSAQDSISCERSRILDLTAPFSHR 96

Query: 2521 STHLGTRQNLEFCP----NSGSISRGFTGIRSLXXXXXXXXXXXSTDADEAA----EVQE 2366
            S+++G   N +  P    ++ SI R    +              STD DE A    E+Q 
Sbjct: 97   SSNMGFCHNGDLLPFIRRSNSSIWRISGHLGDSRFFASVAEAVASTDVDEDASSIEEIQG 156

Query: 2365 MLEELKNVQVDSRSGYANGNN-NRVRRNLPRTQHRPL-GMGAGKYAMLKRRQIKIETEAW 2192
            MLEE+   ++D+R G   G N   VR  +P  + R + GMG+GKYA+L+RRQI+IETEAW
Sbjct: 157  MLEEMS--KIDAREGSKIGGNLEEVRPKVPLEKPRMVPGMGSGKYAILRRRQIRIETEAW 214

Query: 2191 EQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQY 2012
            EQAAKEYKELL DMCE+KLAPNLPYVKSLFLGWFEP +D+I  EQ+ C DP  +LS+ +Y
Sbjct: 215  EQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEKCGDPGNRLSYGRY 274

Query: 2011 FDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRP 1832
            F++LPA+MMAVITMHKLMSLLMTG G G +RVVQAACQ+GEAIE EVRIH+FLEKT+K+ 
Sbjct: 275  FNQLPADMMAVITMHKLMSLLMTGSGYGGIRVVQAACQIGEAIEHEVRIHRFLEKTRKKA 334

Query: 1831 VKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGS 1652
             KDKKNED E  ++AKEQEFLRKKVTNLMK  KL QVRKIV+GQDDS+PWGQ+ QAKVGS
Sbjct: 335  DKDKKNEDVEGATLAKEQEFLRKKVTNLMKKQKLRQVRKIVRGQDDSKPWGQDFQAKVGS 394

Query: 1651 RLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDMLVRQG 1472
            RLIELLMETAYIQPPV Q ADGPPDIRPAFRH+LRT+TKEQQK SRRYGVIECD LVRQG
Sbjct: 395  RLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSRRYGVIECDPLVRQG 454

Query: 1471 LDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQA 1292
            LD+TARHMVIPYMPMLVPP+ WTGYD+G H FLPSY+MR+HG+RQQREAVKRAP+ Q+QA
Sbjct: 455  LDRTARHMVIPYMPMLVPPVHWTGYDKGGHLFLPSYIMRIHGARQQREAVKRAPRMQMQA 514

Query: 1291 VFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXX 1112
            VFEALDTLG+TKWR+NKRVLSVVDR+WS GGRLADL+DR+DIPLPEKP TEDE+      
Sbjct: 515  VFEALDTLGTTKWRINKRVLSVVDRMWSGGGRLADLVDRDDIPLPEKPDTEDEATIRKWK 574

Query: 1111 XXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSS 932
                   KENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL+HL S
Sbjct: 575  WKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 634

Query: 931  DLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADR 752
            DLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGR+AFTENH+++IFDSADR
Sbjct: 635  DLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRVAFTENHLDEIFDSADR 694

Query: 751  PLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYAALGRD 572
            PLEGRRWWLGAEDPFQCL VCINL+EALRS SPETTISH PVHQDGSCNGLQHYAALGRD
Sbjct: 695  PLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRD 754

Query: 571  EIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVK 392
            ++GA AVNLV GDKP DVYS IAARVL+IM+RDA KDPA +PNALRA+LL++QVDRKLVK
Sbjct: 755  KLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPAIDPNALRARLLVNQVDRKLVK 814

Query: 391  QTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGARNI 212
            QTVMTSVYGVTYVGAREQIK+RLKERG I D++ELF ASCY AKTTL AL EMFQ AR+I
Sbjct: 815  QTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFGASCYAAKTTLTALGEMFQAARSI 874

Query: 211  MNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKR 32
            M WLGDCAK+IASEN PVRWTTPLGLPVVQPYR LGRHLIKTSLQVLTLQRETDKVMVKR
Sbjct: 875  MGWLGDCAKIIASENHPVRWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQRETDKVMVKR 934

Query: 31   QKTAFPPNFV 2
            Q+TAFPPNFV
Sbjct: 935  QRTAFPPNFV 944


>ref|XP_020109467.1| DNA-directed RNA polymerase 1B, mitochondrial-like [Ananas comosus]
          Length = 890

 Score = 1300 bits (3365), Expect = 0.0
 Identities = 635/766 (82%), Positives = 688/766 (89%)
 Frame = -1

Query: 2299 RVRRNLPRTQHRPLGMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLP 2120
            R   ++P    +  GMG+GKYAML+RRQIKIETEAWEQAAKEYKELL DMCE+KLAPNLP
Sbjct: 31   RTAVSVPARPKQVHGMGSGKYAMLRRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLP 90

Query: 2119 YVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTG 1940
            YVKSLFLGWFEP +D+I  EQ  C D K + SH  YF++LPA+MMAVITMHKLMSLLMTG
Sbjct: 91   YVKSLFLGWFEPLRDQIALEQDHCRDGKNRASHAPYFNQLPADMMAVITMHKLMSLLMTG 150

Query: 1939 GGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKK 1760
             GDGSVRVVQAACQVGEAIEQE RIHKFLEKT+KR  KDK NED E DSV KEQEFLRK+
Sbjct: 151  SGDGSVRVVQAACQVGEAIEQEARIHKFLEKTRKRAYKDKTNEDIEDDSVTKEQEFLRKR 210

Query: 1759 VTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPP 1580
            VTNLMK  K+HQVR+IVK Q DS+PWGQ+AQAKVGSRLIELLMETAYIQPPV Q ADGPP
Sbjct: 211  VTNLMKQQKVHQVRRIVKEQGDSKPWGQDAQAKVGSRLIELLMETAYIQPPVTQAADGPP 270

Query: 1579 DIRPAFRHTLRTITKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTG 1400
            DIRPAFRH+LRT+TKEQQK SRRYGVIECD LVRQGLD+TARHMVIPYMPMLVPP+ W G
Sbjct: 271  DIRPAFRHSLRTVTKEQQKTSRRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWMG 330

Query: 1399 YDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVD 1220
            YD+GAH FLPSY+MR+HG+RQQREAVKRAP+KQ+QAVFEALDTLGSTKWRVNKRVLS+VD
Sbjct: 331  YDKGAHLFLPSYIMRIHGARQQREAVKRAPRKQMQAVFEALDTLGSTKWRVNKRVLSIVD 390

Query: 1219 RIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKL 1040
            RIWSSGG LADL+DR DIPLPEKP TEDE              KENSERHSQRCDVELKL
Sbjct: 391  RIWSSGGCLADLVDRADIPLPEKPDTEDEVVLKKWKWKLKSVKKENSERHSQRCDVELKL 450

Query: 1039 AVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLK 860
            AV RK+KDEEGFYYPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLK
Sbjct: 451  AVGRKLKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 510

Query: 859  IHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINL 680
            IHL  LY GGVDKLSY+GRIAFTENH+EDIFDSADRPLEGRRWWLGAEDPFQCL VCINL
Sbjct: 511  IHLANLYAGGVDKLSYEGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINL 570

Query: 679  AEALRSESPETTISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAA 500
            AEALRS SPETTISH PVHQDGSCNGLQHYAALGRD++GA AVNLV GDKP DVYSGIAA
Sbjct: 571  AEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAA 630

Query: 499  RVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLK 320
            RVL+IM+RDA KDP+T+PNALRA++L+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLK
Sbjct: 631  RVLEIMQRDAQKDPSTDPNALRARILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLK 690

Query: 319  ERGAIEDESELFSASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPL 140
            ERG I D++ELF ASCY AK TL AL EMF+ AR+IM+WLG+CAK+IASENQPVRWTTPL
Sbjct: 691  ERGVIADDTELFGASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENQPVRWTTPL 750

Query: 139  GLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            GLPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 751  GLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 796


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
            dactylifera]
          Length = 1036

 Score = 1288 bits (3332), Expect = 0.0
 Identities = 647/906 (71%), Positives = 741/906 (81%), Gaps = 15/906 (1%)
 Frame = -1

Query: 2674 MWRTVGRAAPRSSKNLA-------ASIPQLSNFLGFSCESLSVHKNPIFGLKAPFRPTST 2516
            MWR + + A  S KNL        +++  +S+FLGFS +S    KN I+ L+ P      
Sbjct: 37   MWRIIAQTASNSLKNLRFFAGGSLSALRPISSFLGFSQDSFLCEKNRIWDLRPPLSSRFC 96

Query: 2515 HLGTRQNLEFCPNSG----SISRGFTGIRSLXXXXXXXXXXXSTDADEAA----EVQEML 2360
             +G+ +N E  P+ G    SI +    + +            STD DE A    E+Q +L
Sbjct: 97   DIGSHRNGELWPSVGYSNCSIGKLSGFLANSKGYANVAEAVVSTDLDEEASSIEEIQSLL 156

Query: 2359 EELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAMLKRRQIKIETEAWEQAA 2180
            EE+  V+V      ++ +    ++       +  GMGA KYA L++RQIKIETEAWEQAA
Sbjct: 157  EEMSRVEVAEDWKVSDRSQEFPQKAQLEEPKKVSGMGAKKYAKLRQRQIKIETEAWEQAA 216

Query: 2179 KEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDKL 2000
            KEYKELL DMCE+KLAPNLPYVKSLFLGWFEPF+D+I  EQ+ C D + + ++  Y  +L
Sbjct: 217  KEYKELLQDMCEQKLAPNLPYVKSLFLGWFEPFRDKIAAEQEKCRDVRNRAAYGPYIGQL 276

Query: 1999 PAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKDK 1820
            PA+MMAVITMHKLMSLLMTGG +GSV VVQAACQVG AIEQEV+IH+FLEK+K++   +K
Sbjct: 277  PADMMAVITMHKLMSLLMTGGSNGSVLVVQAACQVGSAIEQEVKIHRFLEKSKQKTNINK 336

Query: 1819 KNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLIE 1640
            K+  AE D++ KEQE LRKKVTNLMK  KL QVRKIVKGQDDS+PWGQ+++AKVGSRLIE
Sbjct: 337  KSGVAEVDNITKEQELLRKKVTNLMKKQKLQQVRKIVKGQDDSKPWGQDSRAKVGSRLIE 396

Query: 1639 LLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDMLVRQGLDKT 1460
            LL+ETAYIQPPV+Q AD PPDIRPAFRH LR +  EQ+K+SRRYG IECD LVRQGLD+T
Sbjct: 397  LLVETAYIQPPVNQLADSPPDIRPAFRHLLRNVQNEQKKISRRYGFIECDPLVRQGLDRT 456

Query: 1459 ARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFEA 1280
            ARHMVIPYMPMLVPP+ W GYD+GAH FLPSY+MR HGSRQQREAVKRAP+KQLQ VFEA
Sbjct: 457  ARHMVIPYMPMLVPPISWKGYDKGAHLFLPSYLMRTHGSRQQREAVKRAPRKQLQLVFEA 516

Query: 1279 LDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXXXXXX 1100
            LDTLG+TKWRVNKRVLS+VDR+WSSGGRLA+L+DR+DIPLPEKP TED ++         
Sbjct: 517  LDTLGNTKWRVNKRVLSIVDRMWSSGGRLANLVDRDDIPLPEKPETEDGAEIRKWKWKLK 576

Query: 1099 XXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLCR 920
               KENSERHSQRCDVE+KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL+HL SDLCR
Sbjct: 577  SVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 636

Query: 919  GILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADRPLEG 740
            GILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGRIAFTENH++DIFDSADRPLEG
Sbjct: 637  GILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEG 696

Query: 739  RRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYAALGRDEIGA 560
            RRWWLGAEDPFQCL VCINLAEALRS SPE+TISH PVHQDGSCNGLQHYAALGRD++GA
Sbjct: 697  RRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGSCNGLQHYAALGRDKLGA 756

Query: 559  AAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVKQTVM 380
             +VNLV G+KP DVYSGIAARV +IM++DA KDPATEPNAL A+LLI QVDRKLVKQTVM
Sbjct: 757  ISVNLVAGEKPADVYSGIAARVREIMQKDAEKDPATEPNALHARLLIDQVDRKLVKQTVM 816

Query: 379  TSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGARNIMNWL 200
            TSVYGVTYVGAREQIK+RLKERGAI D+ ELF ASCY AKTTL AL EMFQ AR+IM+WL
Sbjct: 817  TSVYGVTYVGAREQIKRRLKERGAITDDLELFRASCYAAKTTLTALGEMFQAARSIMSWL 876

Query: 199  GDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKTA 20
            GDCAK+IASEN  VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL+LQRETDK+MVKRQ+TA
Sbjct: 877  GDCAKVIASENHAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVLSLQRETDKIMVKRQRTA 936

Query: 19   FPPNFV 2
            FPPNFV
Sbjct: 937  FPPNFV 942


>gb|OAY76980.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Ananas
            comosus]
          Length = 909

 Score = 1281 bits (3315), Expect = 0.0
 Identities = 637/803 (79%), Positives = 692/803 (86%), Gaps = 18/803 (2%)
 Frame = -1

Query: 2398 TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRR--------------NLPRT 2273
            TD DE A    E+Q MLE++      SRSG       R R               ++P  
Sbjct: 106  TDVDEDASAVEEIQTMLEQI------SRSGEPTDGGRRTREITNLGAAASARTAVSVPAR 159

Query: 2272 QHRPLGMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGW 2093
              +  GMG+GKYAML+RRQIKIETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSLFLGW
Sbjct: 160  PKQVHGMGSGKYAMLRRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYVKSLFLGW 219

Query: 2092 FEPFKDEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVV 1913
            FEP +D+I  EQ  C D K + SH  YF++LPA+MMAVITMHKLMSLLMTG GDGSVRVV
Sbjct: 220  FEPLRDQIALEQDHCRDGKNRASHAPYFNQLPADMMAVITMHKLMSLLMTGSGDGSVRVV 279

Query: 1912 QAACQVGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNK 1733
            QAACQVGEAIEQE RIHKFLEKT+KR  KDK NED E DSV KEQEFLRK+VTNLMK  K
Sbjct: 280  QAACQVGEAIEQEARIHKFLEKTRKRAYKDKTNEDIEDDSVTKEQEFLRKRVTNLMKQQK 339

Query: 1732 LHQVRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHT 1553
            +HQVR+IVK Q DS+PWGQ+AQAKVGSRLIELLMETAYIQPPV Q ADGPPDIRPAFRH+
Sbjct: 340  VHQVRRIVKEQGDSKPWGQDAQAKVGSRLIELLMETAYIQPPVTQAADGPPDIRPAFRHS 399

Query: 1552 LRTITKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFL 1373
            LRT+TKEQQK SRRYGVIECD LVRQGLD+TARHMVIPYMPMLVPP+ W GYD+GAH FL
Sbjct: 400  LRTVTKEQQKTSRRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWMGYDKGAHLFL 459

Query: 1372 PSYVMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRL 1193
            PSY+MR+HG+RQQREAVKRAP+KQ+QAVFEALDTLGSTKWRVNKRVLS+VDRIWSSGG L
Sbjct: 460  PSYIMRIHGARQQREAVKRAPRKQMQAVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGCL 519

Query: 1192 ADLIDREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDE 1013
            ADL+DR DIPLPEKP TEDE              KENSERHSQRCDVELKLAV RK+KDE
Sbjct: 520  ADLVDRADIPLPEKPDTEDEVVLKKWKWKLKSVKKENSERHSQRCDVELKLAVGRKLKDE 579

Query: 1012 EGFYYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGG 833
            EGFYYPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY G
Sbjct: 580  EGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 639

Query: 832  GVDKLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESP 653
            GVDKLSY+GRIAFTENH+EDIFDSADRPLEGRRWWLGAEDPFQCL VCINLAEALRS SP
Sbjct: 640  GVDKLSYEGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSP 699

Query: 652  ETTISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRD 473
            ETTISH PVHQDGSCNGLQHYAALGRD++GA AVNLV GDKP DVYSGIAARVL+IM+RD
Sbjct: 700  ETTISHMPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAARVLEIMQRD 759

Query: 472  AAKDPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDES 293
            A KDP+T+PNALRA++L+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERG I D++
Sbjct: 760  AQKDPSTDPNALRARILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDT 819

Query: 292  ELFSASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYR 113
            ELF ASCY AK TL AL EMF+ AR+IM+WLG+CAK+IASENQPVRWTTPLGLPVVQPYR
Sbjct: 820  ELFGASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYR 879

Query: 112  RLGRHLIKTSLQVLTLQRETDKV 44
            +LGRHLIKTSLQVLTLQRETDKV
Sbjct: 880  KLGRHLIKTSLQVLTLQRETDKV 902


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Elaeis
            guineensis]
          Length = 1036

 Score = 1268 bits (3282), Expect = 0.0
 Identities = 641/915 (70%), Positives = 729/915 (79%), Gaps = 24/915 (2%)
 Frame = -1

Query: 2674 MWRTVGRAAPRSSKNLAAS-------IPQLSNFLGFSCESLSVHKNPIFGLKAPFRPTST 2516
            MWR   + A  SSKNL  S       +  +S+FLGF+ +S    KN I  L+ PF     
Sbjct: 37   MWRIFAQTASNSSKNLRFSAGRSLSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFC 96

Query: 2515 HLGTRQNLEFCPNSG-------------SISRGFTGIRSLXXXXXXXXXXXSTDADEAA- 2378
             +G   N E  P+ G             + SRGF  +               TD DE A 
Sbjct: 97   DIGPHHNGELWPSVGYSNCPIGKLSGFLANSRGFADVAEAVAS---------TDLDEEAS 147

Query: 2377 ---EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAMLKRRQIKI 2207
               E+Q +LEE   V+V      ++ +    ++       +  GMGA KYA L++RQIKI
Sbjct: 148  SIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPKKVSGMGAKKYAKLRQRQIKI 207

Query: 2206 ETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKL 2027
            ETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSL LGWFEPF+D+I  EQ+ C + + + 
Sbjct: 208  ETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIAAEQEKCREVRNRA 267

Query: 2026 SHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEK 1847
            ++  Y  +LPA+MMAVITMHKLMSLLMT G +GSV VVQAACQVG AIEQEV+IH+FLEK
Sbjct: 268  AYGPYIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSAIEQEVKIHRFLEK 327

Query: 1846 TKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQ 1667
            +KK+   DKK+  AE D++ KEQE LRK+VTNLMK  KL QVRKIVKGQDDS+PWGQ+ Q
Sbjct: 328  SKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVKGQDDSKPWGQDTQ 387

Query: 1666 AKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDM 1487
            AKVGSRLIELL+ETAYIQPP++Q AD PPDIRPAFRH LR + KEQ+K+SRRYG IECD 
Sbjct: 388  AKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKISRRYGFIECDP 447

Query: 1486 LVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPK 1307
            LVRQGLD+TARHMVIPYMPMLVPP+ W  YD+GAH FLPSYVMR HGSRQQR AVKRAP+
Sbjct: 448  LVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSRQQRAAVKRAPR 507

Query: 1306 KQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQ 1127
            +Q+Q VFEALDTLG+TKWRVNKRVL++VDRIWSSGGRLA+L+DR+D PLPEKP TED ++
Sbjct: 508  EQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPLPEKPETEDGAE 567

Query: 1126 XXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 947
                        KENSERHSQRCDVE+KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL
Sbjct: 568  IRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 627

Query: 946  SHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIF 767
            +HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVDKLSYDGRIAFTENH++DIF
Sbjct: 628  NHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIF 687

Query: 766  DSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYA 587
            DSADRPLEGRRWWLGAEDPFQCL VCINLAEALRS SPE+TISH PVHQDGSCNGLQHYA
Sbjct: 688  DSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGSCNGLQHYA 747

Query: 586  ALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVD 407
            ALGRD++GA +VNLV G+KP DVYSGIAARV +IM++DA KDPA +PNA  A+LLI+QVD
Sbjct: 748  ALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNASHARLLINQVD 807

Query: 406  RKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQ 227
            RKLVKQTVMTSVYGVTYVGAREQIK+RLKERGAI D+ E F ASCY AKTTL AL EMFQ
Sbjct: 808  RKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYAAKTTLTALGEMFQ 867

Query: 226  GARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDK 47
             AR+IM WLGDCAK+IASENQ VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL+LQRETDK
Sbjct: 868  AARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVLSLQRETDK 927

Query: 46   VMVKRQKTAFPPNFV 2
            +MVKRQ+TAFPPNFV
Sbjct: 928  IMVKRQRTAFPPNFV 942


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Elaeis
            guineensis]
          Length = 1042

 Score = 1268 bits (3282), Expect = 0.0
 Identities = 641/915 (70%), Positives = 729/915 (79%), Gaps = 24/915 (2%)
 Frame = -1

Query: 2674 MWRTVGRAAPRSSKNLAAS-------IPQLSNFLGFSCESLSVHKNPIFGLKAPFRPTST 2516
            MWR   + A  SSKNL  S       +  +S+FLGF+ +S    KN I  L+ PF     
Sbjct: 37   MWRIFAQTASNSSKNLRFSAGRSLSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFC 96

Query: 2515 HLGTRQNLEFCPNSG-------------SISRGFTGIRSLXXXXXXXXXXXSTDADEAA- 2378
             +G   N E  P+ G             + SRGF  +               TD DE A 
Sbjct: 97   DIGPHHNGELWPSVGYSNCPIGKLSGFLANSRGFADVAEAVAS---------TDLDEEAS 147

Query: 2377 ---EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAMLKRRQIKI 2207
               E+Q +LEE   V+V      ++ +    ++       +  GMGA KYA L++RQIKI
Sbjct: 148  SIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPKKVSGMGAKKYAKLRQRQIKI 207

Query: 2206 ETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKL 2027
            ETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSL LGWFEPF+D+I  EQ+ C + + + 
Sbjct: 208  ETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIAAEQEKCREVRNRA 267

Query: 2026 SHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEK 1847
            ++  Y  +LPA+MMAVITMHKLMSLLMT G +GSV VVQAACQVG AIEQEV+IH+FLEK
Sbjct: 268  AYGPYIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSAIEQEVKIHRFLEK 327

Query: 1846 TKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQ 1667
            +KK+   DKK+  AE D++ KEQE LRK+VTNLMK  KL QVRKIVKGQDDS+PWGQ+ Q
Sbjct: 328  SKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVKGQDDSKPWGQDTQ 387

Query: 1666 AKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDM 1487
            AKVGSRLIELL+ETAYIQPP++Q AD PPDIRPAFRH LR + KEQ+K+SRRYG IECD 
Sbjct: 388  AKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKISRRYGFIECDP 447

Query: 1486 LVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPK 1307
            LVRQGLD+TARHMVIPYMPMLVPP+ W  YD+GAH FLPSYVMR HGSRQQR AVKRAP+
Sbjct: 448  LVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSRQQRAAVKRAPR 507

Query: 1306 KQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQ 1127
            +Q+Q VFEALDTLG+TKWRVNKRVL++VDRIWSSGGRLA+L+DR+D PLPEKP TED ++
Sbjct: 508  EQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPLPEKPETEDGAE 567

Query: 1126 XXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 947
                        KENSERHSQRCDVE+KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL
Sbjct: 568  IRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 627

Query: 946  SHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIF 767
            +HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVDKLSYDGRIAFTENH++DIF
Sbjct: 628  NHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIF 687

Query: 766  DSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYA 587
            DSADRPLEGRRWWLGAEDPFQCL VCINLAEALRS SPE+TISH PVHQDGSCNGLQHYA
Sbjct: 688  DSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGSCNGLQHYA 747

Query: 586  ALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVD 407
            ALGRD++GA +VNLV G+KP DVYSGIAARV +IM++DA KDPA +PNA  A+LLI+QVD
Sbjct: 748  ALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNASHARLLINQVD 807

Query: 406  RKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQ 227
            RKLVKQTVMTSVYGVTYVGAREQIK+RLKERGAI D+ E F ASCY AKTTL AL EMFQ
Sbjct: 808  RKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYAAKTTLTALGEMFQ 867

Query: 226  GARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDK 47
             AR+IM WLGDCAK+IASENQ VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL+LQRETDK
Sbjct: 868  AARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVLSLQRETDK 927

Query: 46   VMVKRQKTAFPPNFV 2
            +MVKRQ+TAFPPNFV
Sbjct: 928  IMVKRQRTAFPPNFV 942


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1265 bits (3274), Expect = 0.0
 Identities = 634/898 (70%), Positives = 723/898 (80%), Gaps = 7/898 (0%)
 Frame = -1

Query: 2674 MWRTVGRAAPRSSKNLA---ASIPQLSNFLGFSCESLSVHKNPIFGLKAPFRPTSTHLGT 2504
            MWR + R A  +   L+   +SI +   F+GFS +S+       F LK+      +    
Sbjct: 40   MWRHIARRASLTKVRLSRDSSSILRTFGFMGFSQDSILNDTTRPFELKSSMSFRFSERSF 99

Query: 2503 RQNLEFCPNSGSISRGFTGIRSLXXXXXXXXXXXSTDADEAAEVQEMLEELKNVQVDSRS 2324
             +N E       + R   G                  A  A  V  M  E     +D   
Sbjct: 100  LRNGELPSKEDELGRPILGCFRNPISPPRLSNHPKGYASVAEAVCSMDAEEDLSAIDEIQ 159

Query: 2323 GYANGNNNRVRRNLPRTQHRPL----GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLA 2156
                      ++ L     + +    GMG GKY +L+RRQ+KIETEAWEQAAKEY+ELL 
Sbjct: 160  ELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYRELLM 219

Query: 2155 DMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVI 1976
            DMCE+KLAPNLPY+KSLFLGWFEP +D IV EQ+LC   K + ++  YFD+LPAEMM+VI
Sbjct: 220  DMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLPAEMMSVI 279

Query: 1975 TMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEAD 1796
            TMHKLM LLMTGG  GS RVVQAACQ+GEAIE EVRIHKFLEKT+K+  KDKK +  E+D
Sbjct: 280  TMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKTRKKTDKDKKADGGESD 339

Query: 1795 SVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYI 1616
             V KEQ+ LRKKVT+LMK  KL QVR+IVKGQDDS+PWGQ+AQAKVGSRLIELLM+TAYI
Sbjct: 340  PVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAKVGSRLIELLMQTAYI 399

Query: 1615 QPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPY 1436
            QPPVDQ ADGPPDIRPAFRH+L+T+TKE QK SRRYGVIECD LVR+GL++TARHMVIPY
Sbjct: 400  QPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGLERTARHMVIPY 459

Query: 1435 MPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTK 1256
            MPMLVPP+ WTGYD+GA+ FLPSYVMR HG+RQQREAVKRAP+KQL+ VFEALDTLG+TK
Sbjct: 460  MPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGNTK 519

Query: 1255 WRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSE 1076
            WRVNKRVLSVVDRIW+SGGRLADL+DRED+P+PE+P TEDE++            KENSE
Sbjct: 520  WRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKVKAAKKENSE 579

Query: 1075 RHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEG 896
            RHSQRCD+ELKLAVAR+MKDE+GF+YPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEG
Sbjct: 580  RHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 639

Query: 895  RPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAE 716
            RPLGKSGL+WLKIHL  LY GGVDKLSY+GRIAFTENH++DIFDSADRPLEGRRWWL AE
Sbjct: 640  RPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLNAE 699

Query: 715  DPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDG 536
            DPFQCL  CINL+EALRS SPETTISH PVHQDGSCNGLQHYAALGRD++GAAAVNLV G
Sbjct: 700  DPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 759

Query: 535  DKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTY 356
            +KP DVYSGIAARVLDIM+RDA KDP T PNA+ A++LI+QVDRKLVKQTVMTSVYGVTY
Sbjct: 760  EKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTVMTSVYGVTY 819

Query: 355  VGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIA 176
            +GAR+QIK+RLKER  I D+SELF ASCY AKTTL AL EMF+ AR+IM+WLGDCAK+IA
Sbjct: 820  IGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA 879

Query: 175  SENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            SENQPVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 880  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 937


>ref|XP_009394557.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Musa
            acuminata subsp. malaccensis]
          Length = 994

 Score = 1245 bits (3222), Expect = 0.0
 Identities = 633/907 (69%), Positives = 724/907 (79%), Gaps = 16/907 (1%)
 Frame = -1

Query: 2674 MWRTVGRAAPRSSKNLAAS------IPQLSNFLGFSCESLSVHKNPIFGLKAPFRPTSTH 2513
            MWR + R A  +S+NL  S      +P  + FL    +S+   K+ I     P  P  T 
Sbjct: 1    MWRNIARTASSASRNLRLSSNRPSPLPATTGFLSCFQDSIWCEKSRILDPATP--PLVTR 58

Query: 2512 L---GTRQNLEFCPNS----GSISRGFTGI-RSLXXXXXXXXXXXSTDADEAAEVQEMLE 2357
            L   G  Q  E  P +     S+    +G+ R+            STDADE     E ++
Sbjct: 59   LFDAGFWQKGESLPKTLGHVNSLIMEVSGVPRNSRSFASVAEAVSSTDADEDTSTIEEMQ 118

Query: 2356 ELKNVQVDSRSGYANGNNNRVRRN--LPRTQHRPLGMGAGKYAMLKRRQIKIETEAWEQA 2183
             L  +  +   G  +   N++RRN   P+ +    GM A KY ML+RRQI+IETEAWE A
Sbjct: 119  RLLELSAEISGGKEDKRFNKLRRNQQFPKIK---AGMSAEKYTMLRRRQIQIETEAWETA 175

Query: 2182 AKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDK 2003
            AKEYKELL DMCERKLAPNLPY+KSLFLGWFEPF+D+IV EQ      K K S++ YF +
Sbjct: 176  AKEYKELLMDMCERKLAPNLPYMKSLFLGWFEPFRDKIVAEQGQSM-AKNKFSYQHYFSQ 234

Query: 2002 LPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKD 1823
            LPAEM+AVITMHKL+SLLMTGG  G VRVVQA CQVGEAIEQE RIH+FLEKT+K+  KD
Sbjct: 235  LPAEMVAVITMHKLVSLLMTGGESGGVRVVQAVCQVGEAIEQEARIHRFLEKTRKKTSKD 294

Query: 1822 KKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLI 1643
            + +++ E  +V KE++ LRKKVT+LMK  K+ QVRKIV+GQD S+PWGQ+AQ KVGSRLI
Sbjct: 295  QTSDEVEGGAVTKEEQILRKKVTDLMKKQKVQQVRKIVRGQDVSKPWGQDAQVKVGSRLI 354

Query: 1642 ELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDMLVRQGLDK 1463
            EL META+IQPPV Q ADGPPDIRPAFR  +R ++ EQ K ++RYG+IECD LVRQGLD+
Sbjct: 355  ELFMETAFIQPPVSQSADGPPDIRPAFRRVIRIVSSEQLK-TKRYGIIECDPLVRQGLDR 413

Query: 1462 TARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFE 1283
            TARHMVIPYMPML+PP+ W GYD+GAH  LPSY+MR+HG+RQQREA+KRAPKKQ+QAVF+
Sbjct: 414  TARHMVIPYMPMLMPPLNWKGYDRGAHLILPSYIMRIHGARQQREALKRAPKKQMQAVFQ 473

Query: 1282 ALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXXXXX 1103
            ALDTLG TKWRVNKRVLS+VDRIWSSGGRLADL+DREDIPLPEKP TEDES+        
Sbjct: 474  ALDTLGCTKWRVNKRVLSIVDRIWSSGGRLADLVDREDIPLPEKPDTEDESELRKWKWKM 533

Query: 1102 XXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLC 923
                KENSERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL+HL SDLC
Sbjct: 534  RSVKKENSERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 593

Query: 922  RGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADRPLE 743
            RGILEFAEGRPL KSGLRWLKIHL  LY GGVDKLSYDGR+AFTENH+EDIFDSADRPLE
Sbjct: 594  RGILEFAEGRPLMKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTENHVEDIFDSADRPLE 653

Query: 742  GRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYAALGRDEIG 563
            GRRWWLGAEDPFQCL VCINLAEALRS SPETTISH PVHQDGSCNGLQHYAALGRD++G
Sbjct: 654  GRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLG 713

Query: 562  AAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVKQTV 383
            A AVNLV GDKP DVYSGIAARVLDIM+RD+ KDPA +PNAL A+L++ QVDRKLVKQTV
Sbjct: 714  AIAVNLVAGDKPADVYSGIAARVLDIMRRDSQKDPAEDPNALLARLIVDQVDRKLVKQTV 773

Query: 382  MTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGARNIMNW 203
            MTSVYGVT++GAREQIKKRLKERG   D+ ELF AS Y A+TTL ALEEMF+ AR IMNW
Sbjct: 774  MTSVYGVTFIGAREQIKKRLKERGVTADDRELFGASSYAARTTLTALEEMFEAARKIMNW 833

Query: 202  LGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKT 23
            LGDCAK+IA+EN  VRWTTPLGLPVVQPYR LG+H++KTSLQVLTLQRETDKVMV+RQ+T
Sbjct: 834  LGDCAKVIATENHSVRWTTPLGLPVVQPYRALGKHIVKTSLQVLTLQRETDKVMVRRQRT 893

Query: 22   AFPPNFV 2
            AFPPNFV
Sbjct: 894  AFPPNFV 900


>ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X2 [Nelumbo
            nucifera]
          Length = 942

 Score = 1243 bits (3217), Expect = 0.0
 Identities = 608/803 (75%), Positives = 687/803 (85%), Gaps = 4/803 (0%)
 Frame = -1

Query: 2398 TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAM 2231
            TDA+E      E+QE+LEE+   + +    +             +      GMG GKY +
Sbjct: 106  TDAEEDVSVVDEIQELLEEMSKEEKELEFSHQ------------KQTKLVGGMGQGKYLL 153

Query: 2230 LKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQL 2051
            L+RRQ+KIETEAWEQAAKEYKELL DMCE+KLAPNLPY+KSLFLGWFEP +D I  EQ+L
Sbjct: 154  LRRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQEL 213

Query: 2050 CADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEV 1871
            C   K + ++  YFD+LPAEMM+VITMHKL+ LLMTGG  GS RVVQAAC +G+AIE EV
Sbjct: 214  CRKGKNRAAYAPYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEV 273

Query: 1870 RIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDS 1691
            RI+KFLEKTKK+  KDKK E  E+D   KEQ+ LRKKVT+LMK  KL QVR+IVK QDDS
Sbjct: 274  RIYKFLEKTKKKTDKDKKAEGGESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDS 333

Query: 1690 RPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRR 1511
            +PWGQ+AQAKVGS LIELLM+TAYIQ P DQ ADGPPDIRPAFRHTL+TITKE QK SRR
Sbjct: 334  KPWGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRR 393

Query: 1510 YGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQR 1331
            YG+IECD LVR+GL++TARHMVIPYMPMLVPP+ WTGYD+GA+ FLPSYVMR HG+RQQR
Sbjct: 394  YGLIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQR 453

Query: 1330 EAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEK 1151
            EAVKR  +KQL+ +FEALDTLG+TKWR+NKRVL VVDRIW+SGGRLADL+DRED+PLPE+
Sbjct: 454  EAVKRTSRKQLEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEE 513

Query: 1150 PYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGR 971
            P TEDE++            KENSERHSQRCD ELKLAVAR+MKDE GF+YPHNLDFRGR
Sbjct: 514  PETEDEAELKKWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGR 573

Query: 970  AYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFT 791
            AYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSY+GRIAFT
Sbjct: 574  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFT 633

Query: 790  ENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGS 611
            ENH++DIFDSADRPLEGRRWWL A+DPFQCL VCINL+EALRS SPET ISH P+HQDGS
Sbjct: 634  ENHLDDIFDSADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGS 693

Query: 610  CNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRA 431
            CNGLQHYAALGRD++GAAAVNLV GDKP DVYSG+AARVLDIM+RDA KDP TEPNA+ A
Sbjct: 694  CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHA 753

Query: 430  KLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTL 251
            +LLI+QVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLKER AI DESELF ASCY AKTT+
Sbjct: 754  RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTI 813

Query: 250  IALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVL 71
             AL EMF+ AR+IM+WLGDCAK+IASENQPVRWTTPLGLPVVQPYR+LGRHLIKTSLQVL
Sbjct: 814  TALGEMFKAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 873

Query: 70   TLQRETDKVMVKRQKTAFPPNFV 2
            TLQRETDKVMVKRQ+TAFPPNF+
Sbjct: 874  TLQRETDKVMVKRQRTAFPPNFI 896


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1243 bits (3217), Expect = 0.0
 Identities = 608/803 (75%), Positives = 687/803 (85%), Gaps = 4/803 (0%)
 Frame = -1

Query: 2398 TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAM 2231
            TDA+E      E+QE+LEE+   + +    +             +      GMG GKY +
Sbjct: 106  TDAEEDVSVVDEIQELLEEMSKEEKELEFSHQ------------KQTKLVGGMGQGKYLL 153

Query: 2230 LKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQL 2051
            L+RRQ+KIETEAWEQAAKEYKELL DMCE+KLAPNLPY+KSLFLGWFEP +D I  EQ+L
Sbjct: 154  LRRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQEL 213

Query: 2050 CADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEV 1871
            C   K + ++  YFD+LPAEMM+VITMHKL+ LLMTGG  GS RVVQAAC +G+AIE EV
Sbjct: 214  CRKGKNRAAYAPYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEV 273

Query: 1870 RIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDS 1691
            RI+KFLEKTKK+  KDKK E  E+D   KEQ+ LRKKVT+LMK  KL QVR+IVK QDDS
Sbjct: 274  RIYKFLEKTKKKTDKDKKAEGGESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDS 333

Query: 1690 RPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRR 1511
            +PWGQ+AQAKVGS LIELLM+TAYIQ P DQ ADGPPDIRPAFRHTL+TITKE QK SRR
Sbjct: 334  KPWGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRR 393

Query: 1510 YGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQR 1331
            YG+IECD LVR+GL++TARHMVIPYMPMLVPP+ WTGYD+GA+ FLPSYVMR HG+RQQR
Sbjct: 394  YGLIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQR 453

Query: 1330 EAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEK 1151
            EAVKR  +KQL+ +FEALDTLG+TKWR+NKRVL VVDRIW+SGGRLADL+DRED+PLPE+
Sbjct: 454  EAVKRTSRKQLEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEE 513

Query: 1150 PYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGR 971
            P TEDE++            KENSERHSQRCD ELKLAVAR+MKDE GF+YPHNLDFRGR
Sbjct: 514  PETEDEAELKKWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGR 573

Query: 970  AYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFT 791
            AYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSY+GRIAFT
Sbjct: 574  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFT 633

Query: 790  ENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGS 611
            ENH++DIFDSADRPLEGRRWWL A+DPFQCL VCINL+EALRS SPET ISH P+HQDGS
Sbjct: 634  ENHLDDIFDSADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGS 693

Query: 610  CNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRA 431
            CNGLQHYAALGRD++GAAAVNLV GDKP DVYSG+AARVLDIM+RDA KDP TEPNA+ A
Sbjct: 694  CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHA 753

Query: 430  KLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTL 251
            +LLI+QVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLKER AI DESELF ASCY AKTT+
Sbjct: 754  RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTI 813

Query: 250  IALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVL 71
             AL EMF+ AR+IM+WLGDCAK+IASENQPVRWTTPLGLPVVQPYR+LGRHLIKTSLQVL
Sbjct: 814  TALGEMFKAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 873

Query: 70   TLQRETDKVMVKRQKTAFPPNFV 2
            TLQRETDKVMVKRQ+TAFPPNF+
Sbjct: 874  TLQRETDKVMVKRQRTAFPPNFI 896


>ref|XP_006660444.2| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Oryza
            brachyantha]
          Length = 1059

 Score = 1239 bits (3206), Expect = 0.0
 Identities = 613/807 (75%), Positives = 684/807 (84%), Gaps = 10/807 (1%)
 Frame = -1

Query: 2392 ADEAAEVQEMLEELKNVQVDS--RSGYANGNNNRV--RRNLPRTQHR-----PLGMGAGK 2240
            A EA E+    EE+      S      A G   R   RR   R +H        G G  K
Sbjct: 159  ASEAEELHHSSEEIARGDNSSLPAPAPATGQEGREVGRRRTGRGKHSVEAKASHGFGYYK 218

Query: 2239 YAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKE 2060
            YAML+RRQ++IETEAWEQAAKEY+ELLADMCE KLAPNLPYVKSLFLGWFEP +D+I+ E
Sbjct: 219  YAMLRRRQVQIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 278

Query: 2059 QQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIE 1880
            Q L  + + + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ+GEAIE
Sbjct: 279  QDLVCERRARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIE 338

Query: 1879 QEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQVRKIVKG 1703
             EVR+HKFLEK KK+  K+  NE+    S +AKEQE LRKKVT+LMK +KL QVR IVK 
Sbjct: 339  HEVRLHKFLEKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKK 398

Query: 1702 QDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQK 1523
            QD+S+PWGQ+  AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+ KEQQK
Sbjct: 399  QDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQK 458

Query: 1522 LSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGS 1343
             SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYVMR HG+
Sbjct: 459  SSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGA 518

Query: 1342 RQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIP 1163
            RQQREAVKRAP++Q+Q+VFEALDTLGSTKWRVNKRVLS+VDRIWSSGGRLADL+DR D+ 
Sbjct: 519  RQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVA 578

Query: 1162 LPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 983
            LPEKP TEDE++            KENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD
Sbjct: 579  LPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 638

Query: 982  FRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGR 803
            FRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGR
Sbjct: 639  FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGR 698

Query: 802  IAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVH 623
            IAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SPET ISH PVH
Sbjct: 699  IAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVH 758

Query: 622  QDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPN 443
            QDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RVL+IM+ DA KDPAT+P+
Sbjct: 759  QDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPD 818

Query: 442  ALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMA 263
            A RA++L+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFSASCY A
Sbjct: 819  AARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAA 878

Query: 262  KTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTS 83
            K TL AL EMFQ AR+IMNWLGDCAK+IA EN+PV+WTTPLGLPVVQPYR+LGRHLIKTS
Sbjct: 879  KVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTS 938

Query: 82   LQVLTLQRETDKVMVKRQKTAFPPNFV 2
            LQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 939  LQVLTLQRETDKVMVKRQRTAFPPNFV 965


>gb|PAN11641.1| hypothetical protein PAHAL_B02160 [Panicum hallii]
          Length = 1004

 Score = 1238 bits (3203), Expect = 0.0
 Identities = 603/784 (76%), Positives = 681/784 (86%), Gaps = 5/784 (0%)
 Frame = -1

Query: 2338 VDSRSGYANGNNNRVRRNLPRTQHRPL----GMGAGKYAMLKRRQIKIETEAWEQAAKEY 2171
            V+ +      +  R RRN    Q +      GM   KYA L+RRQI++ETEAWEQAAKEY
Sbjct: 127  VEEQQASGRDHRGRHRRNRRGQQAQVAAAEHGMTYHKYASLRRRQIRVETEAWEQAAKEY 186

Query: 2170 KELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDKLPAE 1991
            +ELLADMCE+KLAPNLPY+KSLFLGWFEP +D+I  EQ+L AD   + SH  YF+ LPA+
Sbjct: 187  RELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIAAEQELVADRGSRASHGPYFNMLPAD 246

Query: 1990 MMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKDKKNE 1811
            MMAVITMHKLM LLMTG GDGSVRV+QAACQ+GEAIE EVRIH+FLEKT+K+  K+K+NE
Sbjct: 247  MMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHRFLEKTRKKSNKEKENE 306

Query: 1810 DAEADS-VAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLIELL 1634
            +   DS +AKEQ+ LRKKVT+LMK  KL QVRKIVK QDDSRPWGQ+A AKVGSRLIEL 
Sbjct: 307  EEICDSDIAKEQQRLRKKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELF 366

Query: 1633 METAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDMLVRQGLDKTAR 1454
            +ETA+IQPP  Q +DG PDIRPAFRH +RT+ KEQQKLSRRYGVI+CD LVRQGLD+TA+
Sbjct: 367  IETAHIQPPASQSSDGLPDIRPAFRHEMRTVPKEQQKLSRRYGVIKCDPLVRQGLDRTAK 426

Query: 1453 HMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFEALD 1274
            HMVIPYMPML+PP+ WTGYD+GAH FLPSYVMR HG+RQQREAVKRAPK+Q+Q+VFEAL+
Sbjct: 427  HMVIPYMPMLMPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPKEQMQSVFEALN 486

Query: 1273 TLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXXXXXXXX 1094
            TLGSTKWRVNKRVLS++DRIWSSGGRLADL+DR D+PLPEKP TEDE+            
Sbjct: 487  TLGSTKWRVNKRVLSIIDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLLKKWRWHMRSV 546

Query: 1093 XKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLCRGI 914
             KENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL+HL SDLCRG+
Sbjct: 547  KKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGV 606

Query: 913  LEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADRPLEGRR 734
            LEFAEGRPLG+SGLRWLKIHL  LY GGVDKLSYDGRIAF ENH+E+IFDSADRPLEG+R
Sbjct: 607  LEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYDGRIAFAENHLEEIFDSADRPLEGKR 666

Query: 733  WWLGAEDPFQCLGVCINLAEALRSESPETTISHTPVHQDGSCNGLQHYAALGRDEIGAAA 554
            WWLGAEDPFQCL VC+NL EALRS SPETTISH PVHQDGSCNGLQHYAALGRD++GA A
Sbjct: 667  WWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIA 726

Query: 553  VNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVKQTVMTS 374
            VNLV G+KP DVYSGIA RV++IM+ D+ KDP+T+P+A RA+L++ QVDRKLVKQTVMTS
Sbjct: 727  VNLVAGEKPADVYSGIATRVVEIMRMDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTS 786

Query: 373  VYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGARNIMNWLGD 194
            VYGVTYVGAREQIK+RLKERG I D++ELF ASCY AK TL AL EMFQ AR+IMNWLGD
Sbjct: 787  VYGVTYVGAREQIKRRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGD 846

Query: 193  CAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFP 14
            CAK+IA EN+PV+WTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFP
Sbjct: 847  CAKVIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 906

Query: 13   PNFV 2
            PNFV
Sbjct: 907  PNFV 910


>ref|XP_015612356.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X3 [Oryza sativa Japonica Group]
 dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
 dbj|BAD23544.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
 dbj|BAG90132.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAT07008.1| Os09g0246200 [Oryza sativa Japonica Group]
          Length = 951

 Score = 1237 bits (3200), Expect = 0.0
 Identities = 598/753 (79%), Positives = 670/753 (88%), Gaps = 1/753 (0%)
 Frame = -1

Query: 2257 GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 2078
            G+G  KYAML+RRQI+IETEAWEQAA+EY+ELLADMC++KLAPNLPYVKSLFLGWFEP +
Sbjct: 171  GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 230

Query: 2077 DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 1898
            D+I+ EQ+L  +   + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 231  DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 290

Query: 1897 VGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQV 1721
            +GEAIE EVRIHKFLEKTKK+  K+  NE+   DS +AKEQE LRKKVT+LMK  K+ QV
Sbjct: 291  IGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQV 350

Query: 1720 RKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTI 1541
            R IVK QD+S+PWGQ+A AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+
Sbjct: 351  RNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTV 410

Query: 1540 TKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYV 1361
             +EQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYV
Sbjct: 411  AREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 470

Query: 1360 MRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLI 1181
            MR HG+RQQR+AV+RAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL+
Sbjct: 471  MRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLV 530

Query: 1180 DREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFY 1001
            DR D+ LPEKP TEDE +            KENSERHSQRCDVELKLAVARKMKDE+GFY
Sbjct: 531  DRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFY 590

Query: 1000 YPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDK 821
            YPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDK
Sbjct: 591  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 650

Query: 820  LSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTI 641
            LSYDGRIAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SPET I
Sbjct: 651  LSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMI 710

Query: 640  SHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKD 461
            SH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RV++IMK DA KD
Sbjct: 711  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKD 770

Query: 460  PATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFS 281
            PAT+P+A RA+LL+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFS
Sbjct: 771  PATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFS 830

Query: 280  ASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGR 101
            ASCY AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LGR
Sbjct: 831  ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR 890

Query: 100  HLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            HLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 891  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 923


>ref|XP_015612355.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X2
            [Oryza sativa Japonica Group]
          Length = 993

 Score = 1237 bits (3200), Expect = 0.0
 Identities = 598/753 (79%), Positives = 670/753 (88%), Gaps = 1/753 (0%)
 Frame = -1

Query: 2257 GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 2078
            G+G  KYAML+RRQI+IETEAWEQAA+EY+ELLADMC++KLAPNLPYVKSLFLGWFEP +
Sbjct: 147  GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 206

Query: 2077 DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 1898
            D+I+ EQ+L  +   + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 207  DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 266

Query: 1897 VGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQV 1721
            +GEAIE EVRIHKFLEKTKK+  K+  NE+   DS +AKEQE LRKKVT+LMK  K+ QV
Sbjct: 267  IGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQV 326

Query: 1720 RKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTI 1541
            R IVK QD+S+PWGQ+A AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+
Sbjct: 327  RNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTV 386

Query: 1540 TKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYV 1361
             +EQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYV
Sbjct: 387  AREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 446

Query: 1360 MRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLI 1181
            MR HG+RQQR+AV+RAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL+
Sbjct: 447  MRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLV 506

Query: 1180 DREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFY 1001
            DR D+ LPEKP TEDE +            KENSERHSQRCDVELKLAVARKMKDE+GFY
Sbjct: 507  DRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFY 566

Query: 1000 YPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDK 821
            YPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDK
Sbjct: 567  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 626

Query: 820  LSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTI 641
            LSYDGRIAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SPET I
Sbjct: 627  LSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMI 686

Query: 640  SHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKD 461
            SH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RV++IMK DA KD
Sbjct: 687  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKD 746

Query: 460  PATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFS 281
            PAT+P+A RA+LL+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFS
Sbjct: 747  PATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFS 806

Query: 280  ASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGR 101
            ASCY AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LGR
Sbjct: 807  ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR 866

Query: 100  HLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            HLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 867  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 899


>ref|XP_015612354.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
            [Oryza sativa Japonica Group]
 dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica Group]
 dbj|BAC98395.1| T7 bacteriophage-type single subunit RNA polymerase (mitochondrion)
            [Oryza sativa Japonica Group]
 dbj|BAF24573.1| Os09g0246200 [Oryza sativa Japonica Group]
          Length = 1017

 Score = 1237 bits (3200), Expect = 0.0
 Identities = 598/753 (79%), Positives = 670/753 (88%), Gaps = 1/753 (0%)
 Frame = -1

Query: 2257 GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 2078
            G+G  KYAML+RRQI+IETEAWEQAA+EY+ELLADMC++KLAPNLPYVKSLFLGWFEP +
Sbjct: 171  GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 230

Query: 2077 DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 1898
            D+I+ EQ+L  +   + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 231  DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 290

Query: 1897 VGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQV 1721
            +GEAIE EVRIHKFLEKTKK+  K+  NE+   DS +AKEQE LRKKVT+LMK  K+ QV
Sbjct: 291  IGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQV 350

Query: 1720 RKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTI 1541
            R IVK QD+S+PWGQ+A AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+
Sbjct: 351  RNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTV 410

Query: 1540 TKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYV 1361
             +EQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYV
Sbjct: 411  AREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 470

Query: 1360 MRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLI 1181
            MR HG+RQQR+AV+RAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL+
Sbjct: 471  MRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLV 530

Query: 1180 DREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFY 1001
            DR D+ LPEKP TEDE +            KENSERHSQRCDVELKLAVARKMKDE+GFY
Sbjct: 531  DRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFY 590

Query: 1000 YPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDK 821
            YPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDK
Sbjct: 591  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 650

Query: 820  LSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTI 641
            LSYDGRIAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SPET I
Sbjct: 651  LSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMI 710

Query: 640  SHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKD 461
            SH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RV++IMK DA KD
Sbjct: 711  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKD 770

Query: 460  PATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFS 281
            PAT+P+A RA+LL+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFS
Sbjct: 771  PATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFS 830

Query: 280  ASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGR 101
            ASCY AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LGR
Sbjct: 831  ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR 890

Query: 100  HLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            HLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 891  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 923


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score = 1237 bits (3200), Expect = 0.0
 Identities = 598/753 (79%), Positives = 670/753 (88%), Gaps = 1/753 (0%)
 Frame = -1

Query: 2257 GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 2078
            G+G  KYAML+RRQI+IETEAWEQAA+EY+ELLADMC++KLAPNLPYVKSLFLGWFEP +
Sbjct: 137  GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 196

Query: 2077 DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 1898
            D+I+ EQ+L  +   + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 197  DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 256

Query: 1897 VGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQV 1721
            +GEAIE EVRIHKFLEKTKK+  K+  NE+   DS +AKEQE LRKKVT+LMK  K+ QV
Sbjct: 257  IGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQV 316

Query: 1720 RKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTI 1541
            R IVK QD+S+PWGQ+A AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+
Sbjct: 317  RNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTV 376

Query: 1540 TKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYV 1361
             +EQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYV
Sbjct: 377  AREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 436

Query: 1360 MRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLI 1181
            MR HG+RQQR+AV+RAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL+
Sbjct: 437  MRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLV 496

Query: 1180 DREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFY 1001
            DR D+ LPEKP TEDE +            KENSERHSQRCDVELKLAVARKMKDE+GFY
Sbjct: 497  DRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFY 556

Query: 1000 YPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDK 821
            YPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDK
Sbjct: 557  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 616

Query: 820  LSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETTI 641
            LSYDGRIAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SPET I
Sbjct: 617  LSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMI 676

Query: 640  SHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKD 461
            SH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RV++IMK DA KD
Sbjct: 677  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKD 736

Query: 460  PATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFS 281
            PAT+P+A RA+LL+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFS
Sbjct: 737  PATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFS 796

Query: 280  ASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGR 101
            ASCY AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LGR
Sbjct: 797  ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR 856

Query: 100  HLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            HLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 857  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 889


>ref|XP_002461035.2| DNA-directed RNA polymerase 1B, mitochondrial [Sorghum bicolor]
          Length = 1011

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 605/814 (74%), Positives = 690/814 (84%), Gaps = 17/814 (2%)
 Frame = -1

Query: 2392 ADEAAEVQEMLEELKNVQVD---------SRSGYANGNNNRVR-RNLPRTQHRPL----- 2258
            +++A E+   +EE+   Q           +    A G ++R R R   R +H  +     
Sbjct: 104  SEDAEELHHAIEEIVRAQPSQNLPRPQSVAEERQAPGRDHRSRHRRSGRGRHVEVMAAEH 163

Query: 2257 GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 2078
            GM   +Y  L+RRQI++ETEAWEQAAKEY+ELLADMCE+KLAPNLPY+KSLFLGWFEP +
Sbjct: 164  GMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLR 223

Query: 2077 DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 1898
            D+IV EQ+L ADP  + SH  YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 224  DQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 283

Query: 1897 VGEAIEQEVRIHKFLEKTKKRPVKD-KKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQ 1724
            +GEAIE EVRI++FLEKT+K+  K+ +K E+A  D+ +AKEQ+ LRKKVT+LMK  KL Q
Sbjct: 284  IGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQ 343

Query: 1723 VRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRT 1544
            VR IVK QD+SRPWGQ+ QAKVGSRLIEL M+TA+IQPP  Q +DG PDIRPAFRH +RT
Sbjct: 344  VRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRT 403

Query: 1543 ITKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSY 1364
            + KEQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSY
Sbjct: 404  VAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSY 463

Query: 1363 VMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADL 1184
            VMR HG+RQQREAVKRAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL
Sbjct: 464  VMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADL 523

Query: 1183 IDREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGF 1004
            +DR D+PLPEKP TEDE+             KENSERHSQRCDVELKLAVARKMKDEEGF
Sbjct: 524  VDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGF 583

Query: 1003 YYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVD 824
            YYPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVD
Sbjct: 584  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVD 643

Query: 823  KLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETT 644
            KLSYDGR+AFTENH+E+IFDSADRPLEG+RWWLGAEDPFQCL VC+NL EALRS SPETT
Sbjct: 644  KLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETT 703

Query: 643  ISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAK 464
            ISH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RVL+IM+ DA K
Sbjct: 704  ISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQK 763

Query: 463  DPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELF 284
            DP+ +P+  RA+L++ QVDRKLVKQTVMTSVYGVTYVGAR+QIK+RLKERG I DE+ELF
Sbjct: 764  DPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELF 823

Query: 283  SASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLG 104
             ASCY AK TL AL EMFQ AR IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LG
Sbjct: 824  GASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLG 883

Query: 103  RHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            RHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 884  RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 917


>gb|OQU90275.1| hypothetical protein SORBI_3002G378100 [Sorghum bicolor]
          Length = 976

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 605/814 (74%), Positives = 690/814 (84%), Gaps = 17/814 (2%)
 Frame = -1

Query: 2392 ADEAAEVQEMLEELKNVQVD---------SRSGYANGNNNRVR-RNLPRTQHRPL----- 2258
            +++A E+   +EE+   Q           +    A G ++R R R   R +H  +     
Sbjct: 69   SEDAEELHHAIEEIVRAQPSQNLPRPQSVAEERQAPGRDHRSRHRRSGRGRHVEVMAAEH 128

Query: 2257 GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 2078
            GM   +Y  L+RRQI++ETEAWEQAAKEY+ELLADMCE+KLAPNLPY+KSLFLGWFEP +
Sbjct: 129  GMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLR 188

Query: 2077 DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 1898
            D+IV EQ+L ADP  + SH  YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 189  DQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 248

Query: 1897 VGEAIEQEVRIHKFLEKTKKRPVKD-KKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQ 1724
            +GEAIE EVRI++FLEKT+K+  K+ +K E+A  D+ +AKEQ+ LRKKVT+LMK  KL Q
Sbjct: 249  IGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQ 308

Query: 1723 VRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRT 1544
            VR IVK QD+SRPWGQ+ QAKVGSRLIEL M+TA+IQPP  Q +DG PDIRPAFRH +RT
Sbjct: 309  VRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRT 368

Query: 1543 ITKEQQKLSRRYGVIECDMLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSY 1364
            + KEQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSY
Sbjct: 369  VAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSY 428

Query: 1363 VMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADL 1184
            VMR HG+RQQREAVKRAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL
Sbjct: 429  VMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADL 488

Query: 1183 IDREDIPLPEKPYTEDESQXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGF 1004
            +DR D+PLPEKP TEDE+             KENSERHSQRCDVELKLAVARKMKDEEGF
Sbjct: 489  VDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGF 548

Query: 1003 YYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVD 824
            YYPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVD
Sbjct: 549  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVD 608

Query: 823  KLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSESPETT 644
            KLSYDGR+AFTENH+E+IFDSADRPLEG+RWWLGAEDPFQCL VC+NL EALRS SPETT
Sbjct: 609  KLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETT 668

Query: 643  ISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAK 464
            ISH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RVL+IM+ DA K
Sbjct: 669  ISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQK 728

Query: 463  DPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELF 284
            DP+ +P+  RA+L++ QVDRKLVKQTVMTSVYGVTYVGAR+QIK+RLKERG I DE+ELF
Sbjct: 729  DPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELF 788

Query: 283  SASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLG 104
             ASCY AK TL AL EMFQ AR IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LG
Sbjct: 789  GASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLG 848

Query: 103  RHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFV 2
            RHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFV
Sbjct: 849  RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 882