BLASTX nr result
ID: Ophiopogon23_contig00026008
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00026008
(1457 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010254909.1| PREDICTED: splicing factor U2af large subuni... 77 4e-11
dbj|GAQ80439.1| putative RNA recognition motif containing protei... 72 1e-09
gb|OVA13223.1| RNA recognition motif domain [Macleaya cordata] 71 2e-09
ref|XP_010244304.1| PREDICTED: splicing factor U2af large subuni... 70 5e-09
ref|XP_023893143.1| splicing factor U2af large subunit B-like [Q... 70 7e-09
ref|XP_020525032.1| splicing factor U2af large subunit B isoform... 69 9e-09
ref|XP_011625566.1| splicing factor U2af large subunit B isoform... 69 9e-09
ref|XP_020525027.1| splicing factor U2af large subunit B isoform... 69 9e-09
ref|XP_010244305.1| PREDICTED: splicing factor U2af large subuni... 69 9e-09
ref|XP_010095280.1| splicing factor U2af large subunit B isoform... 69 1e-08
ref|XP_024199493.1| splicing factor U2af large subunit B-like is... 69 2e-08
ref|XP_024199492.1| splicing factor U2af large subunit B-like is... 69 2e-08
ref|XP_004293510.1| PREDICTED: splicing factor U2af large subuni... 68 2e-08
ref|XP_011460245.1| PREDICTED: splicing factor U2af large subuni... 68 2e-08
ref|XP_011460244.1| PREDICTED: splicing factor U2af large subuni... 68 2e-08
ref|XP_021824137.1| splicing factor U2af large subunit B isoform... 68 3e-08
ref|XP_007213839.2| splicing factor U2af large subunit B isoform... 67 3e-08
ref|XP_008225057.1| PREDICTED: splicing factor U2af large subuni... 67 3e-08
ref|XP_021825849.1| splicing factor U2af large subunit B-like is... 67 3e-08
ref|XP_020423198.1| splicing factor U2af large subunit B isoform... 67 4e-08
>ref|XP_010254909.1| PREDICTED: splicing factor U2af large subunit B isoform X1 [Nelumbo
nucifera]
Length = 559
Score = 76.6 bits (187), Expect = 4e-11
Identities = 56/147 (38%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Frame = -1
Query: 368 DDYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189
DD H R HDR RDYDR+ E R
Sbjct: 112 DDDNYHRSRDHDRRRDYDRDREGR--------------RRHRSQSRSQGRSDHRSRSRSR 157
Query: 188 XXXXXXRISGFDMAPPASAQTV-------------------LFP-----GLPAL-VLSMT 84
RISGFDMAPP++A V +FP G+P + V +MT
Sbjct: 158 SRSKSKRISGFDMAPPSTAMLVAAAGQVPGTTPAIPGMFPNMFPLPGQFGVPVMPVQAMT 217
Query: 83 QQATRHARRVYVGGLPPAANEQTIAAF 3
QQATRHARRVYVGGLPP ANEQ++A F
Sbjct: 218 QQATRHARRVYVGGLPPTANEQSVATF 244
>dbj|GAQ80439.1| putative RNA recognition motif containing protein [Klebsormidium
nitens]
Length = 498
Score = 71.6 bits (174), Expect = 1e-09
Identities = 40/69 (57%), Positives = 44/69 (63%), Gaps = 15/69 (21%)
Frame = -1
Query: 164 SGFDMAPPASAQTVL--------------FPGLPAL-VLSMTQQATRHARRVYVGGLPPA 30
SGFDMAPPA A FPG P + V +MTQQATRHARRVYVGGLPP
Sbjct: 99 SGFDMAPPAVAAPPTAGADAGGAVYPFGQFPGFPQIPVAAMTQQATRHARRVYVGGLPPM 158
Query: 29 ANEQTIAAF 3
ANEQ++A F
Sbjct: 159 ANEQSVATF 167
>gb|OVA13223.1| RNA recognition motif domain [Macleaya cordata]
Length = 537
Score = 71.2 bits (173), Expect = 2e-09
Identities = 40/76 (52%), Positives = 44/76 (57%), Gaps = 22/76 (28%)
Frame = -1
Query: 164 SGFDMAPPASAQTVLFPGLPAL----------------------VLSMTQQATRHARRVY 51
SGFDMAPP++A PG+P + SMTQQATRHARRVY
Sbjct: 134 SGFDMAPPSTAVPGQLPGVPQIPEMFPNMFPFGSTQFGALQLMPAQSMTQQATRHARRVY 193
Query: 50 VGGLPPAANEQTIAAF 3
VGGLPP ANEQTIA F
Sbjct: 194 VGGLPPLANEQTIATF 209
>ref|XP_010244304.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nelumbo nucifera]
Length = 563
Score = 70.1 bits (170), Expect = 5e-09
Identities = 53/148 (35%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Frame = -1
Query: 368 DDYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189
DD H R ++R RDYD++ E R
Sbjct: 115 DDDDFHRSRDYERRRDYDKDREGR--------------HGHRSRSQSRGRSHHRSRSRSR 160
Query: 188 XXXXXXRISGFDMAPPASAQTV--------------------LFP-----GLPAL-VLSM 87
RISGFDMAPPA+A +FP G+P + V +M
Sbjct: 161 SRSKSKRISGFDMAPPATAMLAAAAAGQMPGTTPTIPGMFPNMFPLPGQFGVPVMPVQAM 220
Query: 86 TQQATRHARRVYVGGLPPAANEQTIAAF 3
TQQATRHARRVYVGGLPP ANEQ++A F
Sbjct: 221 TQQATRHARRVYVGGLPPTANEQSVATF 248
>ref|XP_023893143.1| splicing factor U2af large subunit B-like [Quercus suber]
gb|POE59979.1| splicing factor u2af large subunit b [Quercus suber]
Length = 586
Score = 69.7 bits (169), Expect = 7e-09
Identities = 57/153 (37%), Positives = 64/153 (41%), Gaps = 31/153 (20%)
Frame = -1
Query: 368 DDYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189
DDY R GR +DR RD+DR+ E R
Sbjct: 133 DDYYRG-GRDYDRRRDFDRDREERSKRKSRSRSKGRSEHRSRSRSRSRSKSKR------- 184
Query: 188 XXXXXXRISGFDMAPPASA--------------QTVLFPG----------------LPAL 99
ISGFDMAPPASA T PG LP +
Sbjct: 185 -------ISGFDMAPPASALLSGAAAVTGQIAGATPTLPGMFPNMFPIATGQQFGALPVM 237
Query: 98 -VLSMTQQATRHARRVYVGGLPPAANEQTIAAF 3
V +MTQQATRHARRVYVGGLPP ANEQ++A F
Sbjct: 238 PVQAMTQQATRHARRVYVGGLPPTANEQSVATF 270
>ref|XP_020525032.1| splicing factor U2af large subunit B isoform X3 [Amborella
trichopoda]
Length = 616
Score = 69.3 bits (168), Expect = 9e-09
Identities = 53/153 (34%), Positives = 61/153 (39%), Gaps = 30/153 (19%)
Frame = -1
Query: 371 ADDYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
A DY RH R DR+ DYDR+ + R
Sbjct: 148 AGDYDRHRSRDSDRNHDYDRDRDRR--------------HRHQSRSRSLDRSRNRSRSRS 193
Query: 191 XXXXXXXRISGFDMAPPASA-----------------------------QTVLFPGLPAL 99
R SGFDMAPP ++ T FPG+ +
Sbjct: 194 RSRSRSKRASGFDMAPPGASVIPGVPIAGQLPGVPQPMPGMLPNMFPFGTTAPFPGMAMM 253
Query: 98 -VLSMTQQATRHARRVYVGGLPPAANEQTIAAF 3
+MTQQATRHARRVYVGGLPP ANEQTIA F
Sbjct: 254 PAQAMTQQATRHARRVYVGGLPPMANEQTIATF 286
>ref|XP_011625566.1| splicing factor U2af large subunit B isoform X2 [Amborella
trichopoda]
Length = 616
Score = 69.3 bits (168), Expect = 9e-09
Identities = 53/153 (34%), Positives = 61/153 (39%), Gaps = 30/153 (19%)
Frame = -1
Query: 371 ADDYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
A DY RH R DR+ DYDR+ + R
Sbjct: 149 AGDYDRHRSRDSDRNHDYDRDRDRR--------------HRHQSRSRSLDRSRNRSRSRS 194
Query: 191 XXXXXXXRISGFDMAPPASA-----------------------------QTVLFPGLPAL 99
R SGFDMAPP ++ T FPG+ +
Sbjct: 195 RSRSRSKRASGFDMAPPGASVIPGVPIAGQLPGVPQPMPGMLPNMFPFGTTAPFPGMAMM 254
Query: 98 -VLSMTQQATRHARRVYVGGLPPAANEQTIAAF 3
+MTQQATRHARRVYVGGLPP ANEQTIA F
Sbjct: 255 PAQAMTQQATRHARRVYVGGLPPMANEQTIATF 287
>ref|XP_020525027.1| splicing factor U2af large subunit B isoform X1 [Amborella
trichopoda]
Length = 617
Score = 69.3 bits (168), Expect = 9e-09
Identities = 53/153 (34%), Positives = 61/153 (39%), Gaps = 30/153 (19%)
Frame = -1
Query: 371 ADDYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
A DY RH R DR+ DYDR+ + R
Sbjct: 149 AGDYDRHRSRDSDRNHDYDRDRDRR--------------HRHQSRSRSLDRSRNRSRSRS 194
Query: 191 XXXXXXXRISGFDMAPPASA-----------------------------QTVLFPGLPAL 99
R SGFDMAPP ++ T FPG+ +
Sbjct: 195 RSRSRSKRASGFDMAPPGASVIPGVPIAGQLPGVPQPMPGMLPNMFPFGTTAPFPGMAMM 254
Query: 98 -VLSMTQQATRHARRVYVGGLPPAANEQTIAAF 3
+MTQQATRHARRVYVGGLPP ANEQTIA F
Sbjct: 255 PAQAMTQQATRHARRVYVGGLPPMANEQTIATF 287
>ref|XP_010244305.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Nelumbo nucifera]
Length = 467
Score = 68.9 bits (167), Expect = 9e-09
Identities = 41/81 (50%), Positives = 48/81 (59%), Gaps = 26/81 (32%)
Frame = -1
Query: 167 ISGFDMAPPASAQTV--------------------LFP-----GLPAL-VLSMTQQATRH 66
ISGFDMAPPA+A +FP G+P + V +MTQQATRH
Sbjct: 72 ISGFDMAPPATAMLAAAAAGQMPGTTPTIPGMFPNMFPLPGQFGVPVMPVQAMTQQATRH 131
Query: 65 ARRVYVGGLPPAANEQTIAAF 3
ARRVYVGGLPP ANEQ++A F
Sbjct: 132 ARRVYVGGLPPTANEQSVATF 152
>ref|XP_010095280.1| splicing factor U2af large subunit B isoform X1 [Morus notabilis]
gb|EXB59126.1| Splicing factor U2af large subunit B [Morus notabilis]
Length = 599
Score = 68.9 bits (167), Expect = 1e-08
Identities = 57/153 (37%), Positives = 64/153 (41%), Gaps = 31/153 (20%)
Frame = -1
Query: 368 DDYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189
DDY R R +DR RDYD++ E R
Sbjct: 148 DDYYR--SRDYDRRRDYDKDREDR----------------HKRKSRSCSRGRSEHRSRSR 189
Query: 188 XXXXXXRISGFDMAPPASAQ---------------TVLFPG---------------LPAL 99
RISGFDMAPPASA T PG LP +
Sbjct: 190 SRSKSKRISGFDMAPPASAMLAGAAAAAAAGQIPGTTTMPGMFPNMFPLATGQFGALPVM 249
Query: 98 -VLSMTQQATRHARRVYVGGLPPAANEQTIAAF 3
V +MTQQATRHARRVYVGGLPP ANEQ++A F
Sbjct: 250 PVQAMTQQATRHARRVYVGGLPPTANEQSVATF 282
>ref|XP_024199493.1| splicing factor U2af large subunit B-like isoform X2 [Rosa
chinensis]
Length = 570
Score = 68.6 bits (166), Expect = 2e-08
Identities = 54/145 (37%), Positives = 61/145 (42%), Gaps = 24/145 (16%)
Frame = -1
Query: 365 DYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
DY R DRHRDYD++ + R
Sbjct: 109 DYDRSRDYDQDRHRDYDQDRDRR-----------------HRHRSPSPSREEDRERSSRS 151
Query: 185 XXXXXRISGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQ 78
R SGFDMAPPA A Q V+ +P LP + +MTQQ
Sbjct: 152 RSKSKRASGFDMAPPAGAVLPTAAASGIPQTMPGVVQNVVPFGTAYPTLPMMPAQAMTQQ 211
Query: 77 ATRHARRVYVGGLPPAANEQTIAAF 3
ATRHARRVYVGGLPP ANEQTIA F
Sbjct: 212 ATRHARRVYVGGLPPLANEQTIATF 236
>ref|XP_024199492.1| splicing factor U2af large subunit B-like isoform X1 [Rosa
chinensis]
gb|PRQ28905.1| putative U2 snRNP auxilliary factor, large subunit, splicing factor
[Rosa chinensis]
Length = 571
Score = 68.6 bits (166), Expect = 2e-08
Identities = 54/145 (37%), Positives = 61/145 (42%), Gaps = 24/145 (16%)
Frame = -1
Query: 365 DYGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
DY R DRHRDYD++ + R
Sbjct: 109 DYDRSRDYDQDRHRDYDQDRDRR-----------------HRHRSPSPSREEDRERSSRS 151
Query: 185 XXXXXRISGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQ 78
R SGFDMAPPA A Q V+ +P LP + +MTQQ
Sbjct: 152 RSKSKRASGFDMAPPAGAVLPTAAASGIPQTMPGVVQNVVPFGTAYPTLPMMPAQAMTQQ 211
Query: 77 ATRHARRVYVGGLPPAANEQTIAAF 3
ATRHARRVYVGGLPP ANEQTIA F
Sbjct: 212 ATRHARRVYVGGLPPLANEQTIATF 236
>ref|XP_004293510.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Fragaria vesca subsp. vesca]
Length = 523
Score = 68.2 bits (165), Expect = 2e-08
Identities = 42/78 (53%), Positives = 46/78 (58%), Gaps = 24/78 (30%)
Frame = -1
Query: 164 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 57
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 117 SGFDMAPPAGAVLPSAASSGFPQTMPGVVQNVMSFGTAYPTLPMMPAQAMTQQATRHARR 176
Query: 56 VYVGGLPPAANEQTIAAF 3
VYVGGLPP ANEQTIA F
Sbjct: 177 VYVGGLPPLANEQTIATF 194
>ref|XP_011460245.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Fragaria vesca subsp. vesca]
Length = 527
Score = 68.2 bits (165), Expect = 2e-08
Identities = 42/78 (53%), Positives = 46/78 (58%), Gaps = 24/78 (30%)
Frame = -1
Query: 164 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 57
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 117 SGFDMAPPAGAVLPSAASSGFPQTMPGVVQNVMSFGTAYPTLPMMPAQAMTQQATRHARR 176
Query: 56 VYVGGLPPAANEQTIAAF 3
VYVGGLPP ANEQTIA F
Sbjct: 177 VYVGGLPPLANEQTIATF 194
>ref|XP_011460244.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Fragaria vesca subsp. vesca]
Length = 528
Score = 68.2 bits (165), Expect = 2e-08
Identities = 42/78 (53%), Positives = 46/78 (58%), Gaps = 24/78 (30%)
Frame = -1
Query: 164 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 57
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 117 SGFDMAPPAGAVLPSAASSGFPQTMPGVVQNVMSFGTAYPTLPMMPAQAMTQQATRHARR 176
Query: 56 VYVGGLPPAANEQTIAAF 3
VYVGGLPP ANEQTIA F
Sbjct: 177 VYVGGLPPLANEQTIATF 194
>ref|XP_021824137.1| splicing factor U2af large subunit B isoform X3 [Prunus avium]
ref|XP_021824138.1| splicing factor U2af large subunit B isoform X4 [Prunus avium]
Length = 600
Score = 67.8 bits (164), Expect = 3e-08
Identities = 57/154 (37%), Positives = 62/154 (40%), Gaps = 32/154 (20%)
Frame = -1
Query: 368 DDYGRHYG-RVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
DD HY R DR RDYDR+ E R
Sbjct: 142 DDDDDHYRIRDSDRRRDYDRDREDR------------HRRKSRSHSRGRSEHKSRSRSRS 189
Query: 191 XXXXXXXRISGFDMAPPASAQ------------------------------TVLFPGLPA 102
RISGFDMAPPASA T F LP
Sbjct: 190 RSRSKSKRISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMFPLATGQFGSLPV 249
Query: 101 L-VLSMTQQATRHARRVYVGGLPPAANEQTIAAF 3
+ V +MTQQATRHARRVYVGGLPP ANEQ++A F
Sbjct: 250 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATF 283
>ref|XP_007213839.2| splicing factor U2af large subunit B isoform X2 [Prunus persica]
gb|ONI10377.1| hypothetical protein PRUPE_4G044200 [Prunus persica]
Length = 520
Score = 67.4 bits (163), Expect = 3e-08
Identities = 55/144 (38%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Frame = -1
Query: 362 YGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
Y R+ + DRHRDYD++ E R
Sbjct: 60 YRRNRTQDFDRHRDYDQDRERR------------------HRHRSRSRSHSRERSPSRSR 101
Query: 182 XXXXRISGFDMAPPASA------------------QTVLFPGLPALVL------SMTQQA 75
R SGFDMAPPA A Q VL G L L +MTQQA
Sbjct: 102 SKSKRTSGFDMAPPAGAVLPNAAVSGIPQTMQGVVQNVLPFGAAHLALPLMPAQAMTQQA 161
Query: 74 TRHARRVYVGGLPPAANEQTIAAF 3
TRHARRVYVGGLPP ANEQTIA F
Sbjct: 162 TRHARRVYVGGLPPLANEQTIATF 185
>ref|XP_008225057.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Prunus mume]
Length = 520
Score = 67.4 bits (163), Expect = 3e-08
Identities = 55/144 (38%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Frame = -1
Query: 362 YGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
Y R+ + DRHRDYD++ E R
Sbjct: 60 YRRNRTQDFDRHRDYDQDRERR------------------HRHRSRSRSHSRDRSPSRSR 101
Query: 182 XXXXRISGFDMAPPASA------------------QTVLFPGLPALVL------SMTQQA 75
R SGFDMAPPA A Q VL G L L +MTQQA
Sbjct: 102 SKSKRTSGFDMAPPAGAVLPNAAVSGIPQTMQGVVQNVLPFGAAHLALPLMPAQAMTQQA 161
Query: 74 TRHARRVYVGGLPPAANEQTIAAF 3
TRHARRVYVGGLPP ANEQTIA F
Sbjct: 162 TRHARRVYVGGLPPLANEQTIATF 185
>ref|XP_021825849.1| splicing factor U2af large subunit B-like isoform X3 [Prunus avium]
Length = 521
Score = 67.4 bits (163), Expect = 3e-08
Identities = 55/144 (38%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Frame = -1
Query: 362 YGRHYGRVHDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
Y R+ + DRHRDYD++ E R
Sbjct: 60 YRRNRTQDFDRHRDYDQDRERR------------------HRHRSRSRSHSRDRSPSRSR 101
Query: 182 XXXXRISGFDMAPPASA------------------QTVLFPGLPALVL------SMTQQA 75
R SGFDMAPPA A Q VL G L L +MTQQA
Sbjct: 102 SKSKRTSGFDMAPPAGAVLPNAAVSGIPQTMQGMVQNVLPFGAAHLALPLMPAQAMTQQA 161
Query: 74 TRHARRVYVGGLPPAANEQTIAAF 3
TRHARRVYVGGLPP ANEQTIA F
Sbjct: 162 TRHARRVYVGGLPPLANEQTIATF 185
>ref|XP_020423198.1| splicing factor U2af large subunit B isoform X2 [Prunus persica]
Length = 600
Score = 67.4 bits (163), Expect = 4e-08
Identities = 42/86 (48%), Positives = 46/86 (53%), Gaps = 31/86 (36%)
Frame = -1
Query: 167 ISGFDMAPPASAQ------------------------------TVLFPGLPAL-VLSMTQ 81
ISGFDMAPPASA T F LP + V +MTQ
Sbjct: 198 ISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMFPLATGQFGSLPVMPVQAMTQ 257
Query: 80 QATRHARRVYVGGLPPAANEQTIAAF 3
QATRHARRVYVGGLPP ANEQ++A F
Sbjct: 258 QATRHARRVYVGGLPPTANEQSVATF 283