BLASTX nr result
ID: Ophiopogon23_contig00025954
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00025954
(487 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018674447.1| PREDICTED: sm-like protein LSM1B isoform X2 ... 98 1e-23
ref|XP_021294477.1| sm-like protein LSM1B [Herrania umbratica] 98 3e-23
ref|XP_009380028.1| PREDICTED: sm-like protein LSM1B isoform X1 ... 98 3e-23
ref|XP_020994040.1| sm-like protein LSM1B isoform X2 [Arachis du... 96 2e-22
ref|XP_002532727.1| PREDICTED: sm-like protein LSM1B [Ricinus co... 96 2e-22
ref|XP_017979087.1| PREDICTED: sm-like protein LSM1B [Theobroma ... 96 3e-22
ref|XP_015954812.1| sm-like protein LSM1B isoform X1 [Arachis du... 96 3e-22
ref|XP_010939893.1| PREDICTED: sm-like protein LSM1B [Elaeis gui... 96 3e-22
ref|XP_008802479.1| PREDICTED: sm-like protein LSM1B [Phoenix da... 96 3e-22
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 96 3e-22
ref|XP_020093262.1| sm-like protein LSM1B isoform X2 [Ananas com... 95 4e-22
ref|XP_009390858.1| PREDICTED: sm-like protein LSM1B [Musa acumi... 95 4e-22
ref|XP_016749609.1| PREDICTED: sm-like protein LSM1B [Gossypium ... 95 6e-22
ref|XP_002516250.1| PREDICTED: sm-like protein LSM1B [Ricinus co... 95 6e-22
gb|KDO73858.1| hypothetical protein CISIN_1g045257mg, partial [C... 94 1e-21
gb|KJB57032.1| hypothetical protein B456_009G145700 [Gossypium r... 93 1e-21
ref|XP_020275976.1| sm-like protein LSM1B [Asparagus officinalis... 94 2e-21
ref|XP_006452830.1| sm-like protein LSM1A [Citrus clementina] >g... 94 2e-21
ref|XP_022721626.1| sm-like protein LSM1B [Durio zibethinus] 93 2e-21
ref|XP_021638923.1| sm-like protein LSM1B [Hevea brasiliensis] 93 2e-21
>ref|XP_018674447.1| PREDICTED: sm-like protein LSM1B isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 105
Score = 98.2 bits (243), Expect = 1e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EE+PA+M CVSVAEIR+AQKAERDATDLKG+MRKRMEFLDLD
Sbjct: 52 NVVLIGELDLEREEIPAHMICVSVAEIRRAQKAERDATDLKGSMRKRMEFLDLD 105
>ref|XP_021294477.1| sm-like protein LSM1B [Herrania umbratica]
Length = 128
Score = 98.2 bits (243), Expect = 3e-23
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE++ELP +MTCVS AEIR+AQKAERDATDLKGTMRKRMEFLDLD
Sbjct: 75 NVVLIGELDLERQELPPHMTCVSAAEIRRAQKAERDATDLKGTMRKRMEFLDLD 128
>ref|XP_009380028.1| PREDICTED: sm-like protein LSM1B isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 128
Score = 98.2 bits (243), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EE+PA+M CVSVAEIR+AQKAERDATDLKG+MRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREEIPAHMICVSVAEIRRAQKAERDATDLKGSMRKRMEFLDLD 128
>ref|XP_020994040.1| sm-like protein LSM1B isoform X2 [Arachis duranensis]
Length = 105
Score = 95.5 bits (236), Expect = 2e-22
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDL KEELP +MTCVS AEIR+AQKAERDATDLKGTMRKRMEFLD D
Sbjct: 52 NVVLIGELDLGKEELPQHMTCVSEAEIRKAQKAERDATDLKGTMRKRMEFLDFD 105
>ref|XP_002532727.1| PREDICTED: sm-like protein LSM1B [Ricinus communis]
gb|EEF29658.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 95.9 bits (237), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLEKEELP +MT VS AEIR+AQKAERDATDLKGTMRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRKRMEFLDLD 128
>ref|XP_017979087.1| PREDICTED: sm-like protein LSM1B [Theobroma cacao]
Length = 128
Score = 95.5 bits (236), Expect = 3e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +MTCVS AEIR+AQKAER+A DLKGTMRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRKRMEFLDLD 128
>ref|XP_015954812.1| sm-like protein LSM1B isoform X1 [Arachis duranensis]
ref|XP_020994039.1| sm-like protein LSM1B isoform X1 [Arachis duranensis]
Length = 128
Score = 95.5 bits (236), Expect = 3e-22
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDL KEELP +MTCVS AEIR+AQKAERDATDLKGTMRKRMEFLD D
Sbjct: 75 NVVLIGELDLGKEELPQHMTCVSEAEIRKAQKAERDATDLKGTMRKRMEFLDFD 128
>ref|XP_010939893.1| PREDICTED: sm-like protein LSM1B [Elaeis guineensis]
Length = 128
Score = 95.5 bits (236), Expect = 3e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +M CVS AEIR+AQKAERDATDLKG+MRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPPHMICVSAAEIRRAQKAERDATDLKGSMRKRMEFLDLD 128
>ref|XP_008802479.1| PREDICTED: sm-like protein LSM1B [Phoenix dactylifera]
ref|XP_008802480.1| PREDICTED: sm-like protein LSM1B [Phoenix dactylifera]
Length = 128
Score = 95.5 bits (236), Expect = 3e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +M CVS AEIR+AQKAERDATDLKG+MRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPPHMICVSAAEIRRAQKAERDATDLKGSMRKRMEFLDLD 128
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 95.5 bits (236), Expect = 3e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +MTCVS AEIR+AQKAER+A DLKGTMRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRKRMEFLDLD 128
>ref|XP_020093262.1| sm-like protein LSM1B isoform X2 [Ananas comosus]
ref|XP_020093270.1| sm-like protein LSM1B isoform X2 [Ananas comosus]
gb|OAY76439.1| Sm-like protein LSM1B [Ananas comosus]
Length = 128
Score = 95.1 bits (235), Expect = 4e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDL+ EELPA+M CVS AEIR+AQKAERDATDLKG+MRKRMEFLDLD
Sbjct: 75 NVVLIGELDLDMEELPAHMICVSAAEIRRAQKAERDATDLKGSMRKRMEFLDLD 128
>ref|XP_009390858.1| PREDICTED: sm-like protein LSM1B [Musa acuminata subsp.
malaccensis]
Length = 128
Score = 95.1 bits (235), Expect = 4e-22
Identities = 46/54 (85%), Positives = 52/54 (96%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELPA+M CVS AEI++AQ+AERDATDLKG+MRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPAHMICVSAAEIKRAQRAERDATDLKGSMRKRMEFLDLD 128
>ref|XP_016749609.1| PREDICTED: sm-like protein LSM1B [Gossypium hirsutum]
ref|XP_017606755.1| PREDICTED: sm-like protein LSM1B [Gossypium arboreum]
gb|KHG18956.1| U6 snRNA-associated Sm-like protein LSm1 [Gossypium arboreum]
Length = 128
Score = 94.7 bits (234), Expect = 6e-22
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +MT VSVAEIR+AQKAER+ATDLKGTMRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPPHMTHVSVAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
>ref|XP_002516250.1| PREDICTED: sm-like protein LSM1B [Ricinus communis]
gb|EEF46252.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 94.7 bits (234), Expect = 6e-22
Identities = 46/54 (85%), Positives = 52/54 (96%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLEKEELP++MTCVS AEI++AQKAER+ATDLKG+MRKRMEFLD D
Sbjct: 75 NVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>gb|KDO73858.1| hypothetical protein CISIN_1g045257mg, partial [Citrus sinensis]
Length = 107
Score = 93.6 bits (231), Expect = 1e-21
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLEKEELPA+MTCVS AEI++AQKAE+DAT LKG+MRKRMEFLD D
Sbjct: 54 NVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
>gb|KJB57032.1| hypothetical protein B456_009G145700 [Gossypium raimondii]
Length = 100
Score = 93.2 bits (230), Expect = 1e-21
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +MT VSVAEIR+AQKAER+ATDLKGTMRKRMEFLDL+
Sbjct: 47 NVVLIGELDLEREELPPHMTHVSVAEIRRAQKAEREATDLKGTMRKRMEFLDLE 100
>ref|XP_020275976.1| sm-like protein LSM1B [Asparagus officinalis]
gb|ONK65384.1| uncharacterized protein A4U43_C07F36550 [Asparagus officinalis]
Length = 128
Score = 93.6 bits (231), Expect = 2e-21
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLEKEELPA+M VSVAEI++AQKAERDATDLKG+MRKRMEFLD D
Sbjct: 75 NVVLIGELDLEKEELPAHMISVSVAEIKKAQKAERDATDLKGSMRKRMEFLDFD 128
>ref|XP_006452830.1| sm-like protein LSM1A [Citrus clementina]
gb|ESR66070.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
Length = 128
Score = 93.6 bits (231), Expect = 2e-21
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLEKEELPA+MTCVS AEI++AQKAE+DAT LKG+MRKRMEFLD D
Sbjct: 75 NVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 128
>ref|XP_022721626.1| sm-like protein LSM1B [Durio zibethinus]
Length = 128
Score = 93.2 bits (230), Expect = 2e-21
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +MT VS AEIR+AQKAER+ATDLKGTMRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPPHMTRVSAAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
>ref|XP_021638923.1| sm-like protein LSM1B [Hevea brasiliensis]
Length = 128
Score = 93.2 bits (230), Expect = 2e-21
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 487 NVVLIGELDLEKEELPANMTCVSVAEIRQAQKAERDATDLKGTMRKRMEFLDLD 326
NVVLIGELDLE+EELP +MT VS AEIR+AQKAER+ATDLKGTMRKRMEFLDLD
Sbjct: 75 NVVLIGELDLEREELPPHMTRVSAAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128