BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00025904
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246188.1| probable mediator of RNA polymerase II trans...    96   1e-20
gb|OAY74023.1| putative mediator of RNA polymerase II transcript...    84   3e-16
ref|XP_020686852.1| probable mediator of RNA polymerase II trans...    83   5e-16
ref|XP_020583159.1| probable mediator of RNA polymerase II trans...    81   4e-15
ref|XP_010912441.1| PREDICTED: probable mediator of RNA polymera...    80   1e-14
ref|XP_008784173.1| PREDICTED: probable mediator of RNA polymera...    79   3e-14
ref|XP_008784172.1| PREDICTED: probable mediator of RNA polymera...    79   3e-14
ref|XP_009414836.1| PREDICTED: probable mediator of RNA polymera...    77   6e-14
ref|XP_018685606.1| PREDICTED: probable mediator of RNA polymera...    77   8e-14
ref|XP_009414835.1| PREDICTED: probable mediator of RNA polymera...    77   8e-14
ref|XP_020215746.1| probable mediator of RNA polymerase II trans...    77   1e-13
ref|XP_020215745.1| probable mediator of RNA polymerase II trans...    77   1e-13
gb|PKA61519.1| putative mediator of RNA polymerase II transcript...    76   2e-13
ref|XP_008781431.1| PREDICTED: probable mediator of RNA polymera...    76   2e-13
ref|XP_008781432.2| PREDICTED: probable mediator of RNA polymera...    76   3e-13
ref|XP_008811266.1| PREDICTED: probable mediator of RNA polymera...    75   4e-13
ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymera...    75   4e-13
ref|XP_015170046.1| PREDICTED: probable mediator of RNA polymera...    72   4e-13
ref|XP_019708190.1| PREDICTED: LOW QUALITY PROTEIN: probable med...    75   5e-13
gb|KYP69393.1| hypothetical protein KK1_008583 [Cajanus cajan]         74   9e-13

>ref|XP_020246188.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Asparagus officinalis]
 ref|XP_020246189.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Asparagus officinalis]
 gb|ONK57557.1| uncharacterized protein A4U43_C09F1720 [Asparagus officinalis]
          Length = 358

 Score = 95.9 bits (237), Expect = 1e-20
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPPLPQDLC 280
           MD +DLRS+LRTTG DLWTLIETAISVAA+DHG ELR RRD FVE+LYAPP PQDLC
Sbjct: 1   MDRDDLRSILRTTGVDLWTLIETAISVAASDHGPELRLRRDRFVEKLYAPP-PQDLC 56


>gb|OAY74023.1| putative mediator of RNA polymerase II transcription subunit 26c
           [Ananas comosus]
          Length = 367

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 41/57 (71%), Positives = 44/57 (77%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPPLPQDLC 280
           MD EDLR VLR+ G D+WTLIETAI+VAA DHG ELR RRD  VERLYA P P D C
Sbjct: 1   MDPEDLRRVLRSNGVDVWTLIETAIAVAARDHGKELRSRRDAIVERLYASPEPADRC 57


>ref|XP_020686852.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Dendrobium catenatum]
 gb|PKU70321.1| putative mediator of RNA polymerase II transcription subunit 26c
           [Dendrobium catenatum]
          Length = 335

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYA 304
           MD EDLRSVLRTTG DLWTLIETAI+VAAA+HG EL+ RRDG VERLY+
Sbjct: 1   MDPEDLRSVLRTTGVDLWTLIETAIAVAAAEHGRELKERRDGIVERLYS 49


>ref|XP_020583159.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Phalaenopsis equestris]
          Length = 335

 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYA 304
           MD E+LRSVLR+TG DLWTLIETAI+VAAA+HG ELR RRDG VERLY+
Sbjct: 1   MDPEELRSVLRSTGVDLWTLIETAIAVAAAEHGRELRARRDGIVERLYS 49


>ref|XP_010912441.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Elaeis guineensis]
          Length = 350

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 41/58 (70%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAP-PLPQDLC 280
           MD EDLR V+R+TG DLWTLIE AI VAA DHG ELR RRDG VERLYA  P   D C
Sbjct: 1   MDAEDLRRVMRSTGVDLWTLIEAAIDVAARDHGKELRARRDGIVERLYATRPRTVDRC 58


>ref|XP_008784173.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X2 [Phoenix dactylifera]
          Length = 350

 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 40/58 (68%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAP-PLPQDLC 280
           MD EDLR V+R+TG DLW LIE AI VAA DHG ELR RRDG VERLYA  P   D C
Sbjct: 1   MDAEDLRRVMRSTGVDLWALIEAAIEVAATDHGKELRARRDGIVERLYATRPRAADRC 58


>ref|XP_008784172.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X1 [Phoenix dactylifera]
          Length = 352

 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 40/58 (68%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAP-PLPQDLC 280
           MD EDLR V+R+TG DLW LIE AI VAA DHG ELR RRDG VERLYA  P   D C
Sbjct: 1   MDAEDLRRVMRSTGVDLWALIEAAIEVAATDHGKELRARRDGIVERLYATRPRAADRC 58


>ref|XP_009414836.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X3 [Musa acuminata subsp.
           malaccensis]
          Length = 325

 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPP 298
           MD E+LR +LR +G DLW L++TA++VAAADH  ELR RRDG VERLYAPP
Sbjct: 21  MDAEELRRMLRGSGVDLWALLDTAVAVAAADHAEELRARRDGIVERLYAPP 71


>ref|XP_018685606.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 354

 Score = 77.4 bits (189), Expect = 8e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPP 298
           MD E+LR +LR +G DLW L++TA++VAAADH  ELR RRDG VERLYAPP
Sbjct: 21  MDAEELRRMLRGSGVDLWALLDTAVAVAAADHAEELRARRDGIVERLYAPP 71


>ref|XP_009414835.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 364

 Score = 77.4 bits (189), Expect = 8e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPP 298
           MD E+LR +LR +G DLW L++TA++VAAADH  ELR RRDG VERLYAPP
Sbjct: 21  MDAEELRRMLRGSGVDLWALLDTAVAVAAADHAEELRARRDGIVERLYAPP 71


>ref|XP_020215746.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X2 [Cajanus cajan]
 gb|KYP67820.1| hypothetical protein KK1_024173 [Cajanus cajan]
          Length = 313

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 37/55 (67%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLY----APP 298
           MD ED RS+L + GAD+WTLI+TAI+VA+ DHG EL+RRRDG VERLY    APP
Sbjct: 1   MDSEDFRSILESAGADVWTLIDTAIAVASVDHGDELKRRRDGIVERLYVASSAPP 55


>ref|XP_020215745.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X1 [Cajanus cajan]
          Length = 338

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 37/55 (67%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLY----APP 298
           MD ED RS+L + GAD+WTLI+TAI+VA+ DHG EL+RRRDG VERLY    APP
Sbjct: 1   MDSEDFRSILESAGADVWTLIDTAIAVASVDHGDELKRRRDGIVERLYVASSAPP 55


>gb|PKA61519.1| putative mediator of RNA polymerase II transcription subunit 26c
           [Apostasia shenzhenica]
          Length = 341

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAP 301
           MD EDLR+ LRT G DLW+L+ETAI+VAA DH  EL+ RRDG VERLYAP
Sbjct: 1   MDPEDLRAFLRTAGVDLWSLLETAIAVAAVDHQKELKARRDGIVERLYAP 50


>ref|XP_008781431.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X2 [Phoenix dactylifera]
 ref|XP_008781433.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X2 [Phoenix dactylifera]
          Length = 354

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPPL 295
           MD EDLR V+R+ G DLWTLIETA+ VAA D+G ELR RRDG VERLYA  L
Sbjct: 1   MDAEDLRRVMRSMGVDLWTLIETALDVAATDYGKELRARRDGIVERLYAAGL 52


>ref|XP_008781432.2| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X1 [Phoenix dactylifera]
          Length = 438

 Score = 76.3 bits (186), Expect = 3e-13
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPPL 295
           MD EDLR V+R+ G DLWTLIETA+ VAA D+G ELR RRDG VERLYA  L
Sbjct: 85  MDAEDLRRVMRSMGVDLWTLIETALDVAATDYGKELRARRDGIVERLYAAGL 136


>ref|XP_008811266.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Phoenix dactylifera]
          Length = 270

 Score = 74.7 bits (182), Expect = 4e-13
 Identities = 36/49 (73%), Positives = 40/49 (81%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYA 304
           MD  DLR V+R+ G DLWTLIETA+ VAAAD+G ELR RRDG VERLYA
Sbjct: 1   MDAGDLRRVMRSMGVDLWTLIETALDVAAADYGKELRARRDGIVERLYA 49


>ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Glycine max]
 ref|XP_014634448.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Glycine max]
 gb|KRH43379.1| hypothetical protein GLYMA_08G146000 [Glycine max]
 gb|KRH43380.1| hypothetical protein GLYMA_08G146000 [Glycine max]
          Length = 314

 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPPLPQDLC 280
           MD ED RS+L + G D+W L++ AI+VA+ADH  EL+RRRDG VERLYA   P  LC
Sbjct: 1   MDSEDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLC 57


>ref|XP_015170046.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Solanum tuberosum]
          Length = 131

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPPL 295
           M+L++LRS+L+ +  DLW+LI+TAISVA  DHG ELR RRD  VE+LYAP L
Sbjct: 1   MELDELRSILKNSSVDLWSLIDTAISVAILDHGNELRSRRDAIVEKLYAPLL 52


>ref|XP_019708190.1| PREDICTED: LOW QUALITY PROTEIN: probable mediator of RNA polymerase
           II transcription subunit 26c [Elaeis guineensis]
          Length = 354

 Score = 75.1 bits (183), Expect = 5e-13
 Identities = 38/58 (65%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLY-APPLPQDLC 280
           MD EDLR ++R+ G DLWTLIETA+ VAA D+G ELR RRDG VERLY A P   D C
Sbjct: 1   MDAEDLRRMMRSLGVDLWTLIETALDVAATDYGKELRERRDGIVERLYSAWPRAADRC 58


>gb|KYP69393.1| hypothetical protein KK1_008583 [Cajanus cajan]
          Length = 338

 Score = 74.3 bits (181), Expect = 9e-13
 Identities = 35/57 (61%), Positives = 41/57 (71%)
 Frame = -2

Query: 450 MDLEDLRSVLRTTGADLWTLIETAISVAAADHGAELRRRRDGFVERLYAPPLPQDLC 280
           MDL+D RS+L T G D+W  I+ AI+VA+AD  AELRRRRDG VERLYA   P   C
Sbjct: 1   MDLDDFRSILDTAGVDVWMFIDAAIAVASADSAAELRRRRDGIVERLYAATAPPPRC 57