BLASTX nr result
ID: Ophiopogon23_contig00025864
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00025864
(951 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 102 4e-38
gb|AFP55573.1| retrotransposon protein [Rosa rugosa] 100 1e-37
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 93 2e-37
gb|AQY61302.1| Pol [Vitis vinifera] 93 8e-37
gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinen... 99 8e-37
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 92 1e-36
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 92 2e-36
gb|AQY61293.1| Gag-Pol [Arabidopsis thaliana] 91 5e-36
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 91 5e-36
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 91 5e-36
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 93 6e-36
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 97 9e-36
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304... 99 4e-35
gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposo... 94 4e-35
gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposo... 92 9e-35
gb|AQY61295.1| Pol [Coffea arabica] 94 1e-34
gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinen... 96 1e-34
gb|AQY61297.1| Pol [Coffea canephora] 94 2e-34
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 92 2e-34
gb|KYP69371.1| Retrovirus-related Pol polyprotein from transposo... 92 3e-34
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 102 bits (253), Expect(3) = 4e-38
Identities = 50/70 (71%), Positives = 62/70 (88%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
+ RY++ LVAQ FSQRPGIDYEET+S V+D+ITFRYL+SLVV EKLD +LM V+TTYL G
Sbjct: 1004 VVRYKSRLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTTYLYG 1063
Query: 519 NLDSEIHMKI 548
+LDSEI+MK+
Sbjct: 1064 DLDSEIYMKV 1073
Score = 75.5 bits (184), Expect(3) = 4e-38
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +1
Query: 577 NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVILA 756
+K R+ R K +YGLK S RMWYN L +Y+ +GY NN ICPC+FIK+ +GF I+A
Sbjct: 1085 SKPRSAFSIRLKHSLYGLKQSGRMWYNRLSDYLIGKGYINNEICPCVFIKRTSSGFAIVA 1144
Query: 757 VYVDNI 774
VYVD++
Sbjct: 1145 VYVDDM 1150
Score = 30.8 bits (68), Expect(3) = 4e-38
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 806 KKTASYLKKEFEMNDLSET 862
K+TA YLK EFEM DL +T
Sbjct: 1160 KETAKYLKSEFEMKDLGKT 1178
>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
Length = 2242
Score = 100 bits (248), Expect(3) = 1e-37
Identities = 49/70 (70%), Positives = 61/70 (87%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
+ RY+A LVAQ FSQRPGIDY+ET+S V+D+ITFRYL+SLVV EKLD +LM V+T YL G
Sbjct: 1006 VVRYKARLVAQGFSQRPGIDYDETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLYG 1065
Query: 519 NLDSEIHMKI 548
+LDSEI+MK+
Sbjct: 1066 DLDSEIYMKV 1075
Score = 76.3 bits (186), Expect(3) = 1e-37
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +1
Query: 577 NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVILA 756
+K R+ R KR +YGLK S RMWYN L +Y+ +GY N+ ICPC+FIK+ +GF I+A
Sbjct: 1087 SKPRSAFSIRLKRSLYGLKQSRRMWYNRLSDYLIGKGYINDEICPCVFIKRTSSGFAIVA 1146
Query: 757 VYVDNI 774
VYVD++
Sbjct: 1147 VYVDDM 1152
Score = 30.8 bits (68), Expect(3) = 1e-37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 806 KKTASYLKKEFEMNDLSET 862
K+TA YLK EFEM DL +T
Sbjct: 1162 KETAKYLKSEFEMKDLGKT 1180
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 93.2 bits (230), Expect(3) = 2e-37
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGIDYEET+S V+D ITFR+LISL V E LD RLM V+T YL G
Sbjct: 876 IIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITAYLYG 935
Query: 519 NLDSEIHMKI 548
++D++I+MKI
Sbjct: 936 SMDNDIYMKI 945
Score = 82.8 bits (203), Expect(3) = 2e-37
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNL---TQNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GF L K RN + + +R +YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 948 GFKLPDANNTKPRNMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1007
Query: 730 FLNGFVILAVYVDNI 774
GF I+AVYVD++
Sbjct: 1008 SETGFAIIAVYVDDL 1022
Score = 30.0 bits (66), Expect(3) = 2e-37
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T +YLKKEFEM DL +T
Sbjct: 1033 RTTNYLKKEFEMKDLGKT 1050
>gb|AQY61302.1| Pol [Vitis vinifera]
Length = 1223
Score = 92.8 bits (229), Expect(3) = 8e-37
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGIDYEET+S V+D ITFR+LISL + E LD RLM V+T YL G
Sbjct: 739 IIRYKARLVAQGFSQRPGIDYEETYSPVMDTITFRFLISLAISEGLDMRLMDVITAYLYG 798
Query: 519 NLDSEIHMKI 548
++D++I+MKI
Sbjct: 799 SMDNDIYMKI 808
Score = 81.3 bits (199), Expect(3) = 8e-37
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNLTQ---NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GF L+ K R+ + + +R +YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 811 GFKLSDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 870
Query: 730 FLNGFVILAVYVDNI 774
GF I+AVYVD++
Sbjct: 871 SETGFAIIAVYVDDL 885
Score = 30.0 bits (66), Expect(3) = 8e-37
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T +YLKKEFEM DL +T
Sbjct: 896 RTTNYLKKEFEMKDLGKT 913
>gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 725
Score = 99.0 bits (245), Expect(3) = 8e-37
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
+ RY+A LVAQ FSQRPGIDYEET+ V+D+ITFRYL+SLVV EKLD +LM V+T YL G
Sbjct: 223 VVRYKARLVAQGFSQRPGIDYEETYYPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLYG 282
Query: 519 NLDSEIHMKI 548
+LDSEI+MK+
Sbjct: 283 DLDSEIYMKV 292
Score = 74.3 bits (181), Expect(3) = 8e-37
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +1
Query: 577 NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVILA 756
+K R+ R +R +YGLK S RMWYN L +Y+ +GY N+ ICPC+FIK+ +GF I+A
Sbjct: 304 SKPRSAFSIRLRRSLYGLKQSGRMWYNRLSDYLIGKGYVNDEICPCVFIKRTSSGFAIVA 363
Query: 757 VYVDNI 774
VYVD++
Sbjct: 364 VYVDDM 369
Score = 30.8 bits (68), Expect(3) = 8e-37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 806 KKTASYLKKEFEMNDLSET 862
K+TA YLK EFEM DL +T
Sbjct: 379 KETAKYLKSEFEMKDLGKT 397
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 92.4 bits (228), Expect(3) = 1e-36
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ SQRPGIDYEET+S V+D ITFR+LISL V E LD RLM V+TTYL G
Sbjct: 1012 IIRYKARLVAQGXSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITTYLYG 1071
Query: 519 NLDSEIHMKI 548
++D++I+MKI
Sbjct: 1072 SMDNDIYMKI 1081
Score = 80.9 bits (198), Expect(3) = 1e-36
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNL---TQNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GF L K R+ + + +R +YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 1084 GFELPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1143
Query: 730 FLNGFVILAVYVDNI 774
GF I+AVYVD++
Sbjct: 1144 SETGFAIIAVYVDDL 1158
Score = 30.0 bits (66), Expect(3) = 1e-36
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T +YLKKEFEM DL +T
Sbjct: 1169 RTTNYLKKEFEMKDLGKT 1186
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 91.7 bits (226), Expect(3) = 2e-36
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGIDYEET+S ++D ITFR+LISL V E LD LM V+TTYL G
Sbjct: 228 IIRYKARLVAQGFSQRPGIDYEETYSPIMDAITFRFLISLAVLEGLDMCLMDVITTYLYG 287
Query: 519 NLDSEIHMKI 548
++D++I+MKI
Sbjct: 288 SMDNDIYMKI 297
Score = 81.3 bits (199), Expect(3) = 2e-36
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNLTQ---NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GF L + K R+ + + +R +YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 300 GFKLPEANNTKPRSMYSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYVNNPICPCIFIKK 359
Query: 730 FLNGFVILAVYVDNI 774
GF I+AVYVD++
Sbjct: 360 SETGFAIIAVYVDDL 374
Score = 30.0 bits (66), Expect(3) = 2e-36
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T +YLKKEFEM DL +T
Sbjct: 385 RTTNYLKKEFEMKDLGKT 402
>gb|AQY61293.1| Gag-Pol [Arabidopsis thaliana]
Length = 1552
Score = 90.9 bits (224), Expect(3) = 5e-36
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I R++A LVAQ FSQRPG+DYEET+S V+D TFRYLISL + E LD RLM V+T YL G
Sbjct: 1077 IVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYG 1136
Query: 519 NLDSEIHMKI 548
LD+EI+M++
Sbjct: 1137 PLDNEIYMRL 1146
Score = 81.3 bits (199), Expect(3) = 5e-36
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +1
Query: 574 QNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLN-GFVI 750
+N R+ +C R R +YGLK S RMWYN L EY+ +EGY N+ I PC+FIKKF + GFVI
Sbjct: 1157 KNGSRDQYCIRLNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 1216
Query: 751 LAVYVDNI 774
+AVYVD++
Sbjct: 1217 IAVYVDDL 1224
Score = 29.3 bits (64), Expect(3) = 5e-36
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T YLKKEFEM DL +T
Sbjct: 1235 QTVEYLKKEFEMKDLGKT 1252
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 90.9 bits (224), Expect(3) = 5e-36
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I R++A LVAQ FSQRPG+DYEET+S V+D TFRYLISL + E LD RLM V+T YL G
Sbjct: 668 IVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYG 727
Query: 519 NLDSEIHMKI 548
LD+EI+M++
Sbjct: 728 PLDNEIYMRL 737
Score = 81.3 bits (199), Expect(3) = 5e-36
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +1
Query: 574 QNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLN-GFVI 750
+N R+ +C R R +YGLK S RMWYN L EY+ +EGY N+ I PC+FIKKF + GFVI
Sbjct: 748 KNGSRDQYCIRMNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 807
Query: 751 LAVYVDNI 774
+AVYVD++
Sbjct: 808 IAVYVDDL 815
Score = 29.3 bits (64), Expect(3) = 5e-36
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T YLKKEFEM DL +T
Sbjct: 826 QTVEYLKKEFEMKDLGKT 843
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 90.9 bits (224), Expect(3) = 5e-36
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I R++A LVAQ FSQRPG+DYEET+S V+D TFRYLISL + E LD RLM V+T YL G
Sbjct: 668 IVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYG 727
Query: 519 NLDSEIHMKI 548
LD+EI+M++
Sbjct: 728 PLDNEIYMRL 737
Score = 81.3 bits (199), Expect(3) = 5e-36
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +1
Query: 574 QNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLN-GFVI 750
+N R+ +C R R +YGLK S RMWYN L EY+ +EGY N+ I PC+FIKKF + GFVI
Sbjct: 748 KNGSRDQYCIRLNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 807
Query: 751 LAVYVDNI 774
+AVYVD++
Sbjct: 808 IAVYVDDL 815
Score = 29.3 bits (64), Expect(3) = 5e-36
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T YLKKEFEM DL +T
Sbjct: 826 QTVEYLKKEFEMKDLGKT 843
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 93.2 bits (230), Expect(3) = 6e-36
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGIDYEET+S V+D ITFR+LISL V E LD RLM V+T YL G
Sbjct: 896 IIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITAYLYG 955
Query: 519 NLDSEIHMKI 548
++D++I+MKI
Sbjct: 956 SMDNDIYMKI 965
Score = 77.8 bits (190), Expect(3) = 6e-36
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNL---TQNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GF L K R+ + + +R +YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 968 GFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1027
Query: 730 FLNGFVILAVYVDNI 774
F I+AVYVD++
Sbjct: 1028 SETRFAIIAVYVDDL 1042
Score = 30.0 bits (66), Expect(3) = 6e-36
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T +YLKKEFEM DL +T
Sbjct: 1053 RTTNYLKKEFEMKDLGKT 1070
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 96.7 bits (239), Expect(3) = 9e-36
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPG+DYEET+S VID ITFR+LISL V E LD RLM+V+TTYL G
Sbjct: 201 IIRYKARLVAQGFSQRPGVDYEETYSPVIDAITFRFLISLAVSEGLDMRLMNVITTYLYG 260
Query: 519 NLDSEIHMKI 548
++D++I+MKI
Sbjct: 261 SIDNDIYMKI 270
Score = 78.2 bits (191), Expect(3) = 9e-36
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNLTQ---NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GF L + K R+ + + ++ +YGLK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 273 GFKLLEANNTKPRSIYSIKLQQSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 332
Query: 730 FLNGFVILAVYVDNI 774
FVI+AVYVD++
Sbjct: 333 SETRFVIIAVYVDDL 347
Score = 25.8 bits (55), Expect(3) = 9e-36
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+ +YL KEFEM DL +T
Sbjct: 358 RITNYLNKEFEMKDLGKT 375
>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
vesca subsp. vesca]
Length = 521
Score = 99.0 bits (245), Expect(2) = 4e-35
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = +3
Query: 348 YEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCGNLD 527
Y+A LVAQ FSQRPGIDYEET+S V+D+ITFRYL+SLVV EKLD +LM V+T YL G+LD
Sbjct: 375 YKARLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLYGDLD 434
Query: 528 SEIHMKI 548
SEI+MK+
Sbjct: 435 SEIYMKV 441
Score = 79.0 bits (193), Expect(2) = 4e-35
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1
Query: 571 TQNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVI 750
+ +K R+ + R +R +YGLK S RMWY L +Y+ REGY N+ +CPC+FIKK +GF I
Sbjct: 451 SNSKPRSAYAIRLQRSLYGLKQSGRMWYTRLSDYLIREGYKNDELCPCVFIKKTSSGFAI 510
Query: 751 LAVYVDNI 774
+AVYVD++
Sbjct: 511 VAVYVDDM 518
>gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 814
Score = 94.0 bits (232), Expect(3) = 4e-35
Identities = 48/70 (68%), Positives = 59/70 (84%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGID+EET+S V+D TFRYLISLVV EKL+ LM V+TTYL G
Sbjct: 337 IVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMDVVTTYLYG 396
Query: 519 NLDSEIHMKI 548
+LD++I+MK+
Sbjct: 397 SLDADIYMKL 406
Score = 79.7 bits (195), Expect(3) = 4e-35
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +1
Query: 559 GFNLTQNKY-RNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFL 735
GFNL + R + + + +YGLK S RMWYN L EY+ +EGY N+ ICPC+FIK+
Sbjct: 409 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQ 468
Query: 736 NGFVILAVYVDNI 774
NGF I+ VYVD+I
Sbjct: 469 NGFAIIVVYVDDI 481
Score = 24.6 bits (52), Expect(3) = 4e-35
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
K LKKEFEM DL T
Sbjct: 492 KAIDCLKKEFEMKDLGRT 509
>gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 834
Score = 92.0 bits (227), Expect(3) = 9e-35
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGID+EET+S V+D TFRYLISLVV EKL+ LM V+T YL G
Sbjct: 467 IVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMDVVTAYLYG 526
Query: 519 NLDSEIHMKI 548
+LD++I+MK+
Sbjct: 527 SLDADIYMKL 536
Score = 79.7 bits (195), Expect(3) = 9e-35
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +1
Query: 559 GFNLTQNKY-RNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFL 735
GFNL + R + + + +YGLK S RMWYN L EY+ +EGY N+ ICPC+FIK+
Sbjct: 539 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQ 598
Query: 736 NGFVILAVYVDNI 774
NGF I+ VYVD+I
Sbjct: 599 NGFAIIVVYVDDI 611
Score = 25.4 bits (54), Expect(3) = 9e-35
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSETD 865
K LKKEFEM DL T+
Sbjct: 622 KAIDCLKKEFEMKDLGRTE 640
>gb|AQY61295.1| Pol [Coffea arabica]
Length = 1160
Score = 94.0 bits (232), Expect(3) = 1e-34
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPG DY+ET+S V+D ITFRYL+S V EKLD RLM V+T YL G
Sbjct: 685 IVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSFAVHEKLDMRLMDVVTAYLYG 744
Query: 519 NLDSEIHMKI 548
NL+++I+M+I
Sbjct: 745 NLENDIYMRI 754
Score = 78.2 bits (191), Expect(3) = 1e-34
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Frame = +1
Query: 550 IS*GFNLTQ---NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMF 720
IS GFN+ + + +N + + ++ +YGLK S RMWYN L E +++EGY N+ ICPC+F
Sbjct: 754 ISEGFNMPEACKSNPKNIYSIKLQKSLYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVF 813
Query: 721 IKKFLNGFVILAVYVDNI 774
IKK + FVI+AVYVD++
Sbjct: 814 IKKNGSNFVIIAVYVDDL 831
Score = 24.6 bits (52), Expect(3) = 1e-34
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 806 KKTASYLKKEFEMNDLSET 862
+ + YLKKEFE+ D +T
Sbjct: 841 QNSVEYLKKEFEIKDFGKT 859
>gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 797
Score = 95.9 bits (237), Expect(2) = 1e-34
Identities = 47/70 (67%), Positives = 60/70 (85%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGIDY+ET+S V+D+ITFRYLISL + EKL+ +LM V+T YL G
Sbjct: 310 IVRYKARLVAQGFSQRPGIDYDETYSPVMDVITFRYLISLAISEKLNIQLMDVVTAYLYG 369
Query: 519 NLDSEIHMKI 548
+LD+EI+MK+
Sbjct: 370 DLDTEIYMKV 379
Score = 80.1 bits (196), Expect(2) = 1e-34
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +1
Query: 586 RNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFLNGFVILAVYV 765
RNT R +R +YGLK S RMWYN L EY+ GY NN +CPC+FIKK +GFVI+AVYV
Sbjct: 394 RNTLSIRLRRSLYGLKQSGRMWYNRLSEYLIGMGYVNNELCPCVFIKKTSSGFVIVAVYV 453
Query: 766 DNI 774
D++
Sbjct: 454 DDM 456
>gb|AQY61297.1| Pol [Coffea canephora]
Length = 1045
Score = 94.0 bits (232), Expect(3) = 2e-34
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPG DY+ET+S V+D ITFRYL+S V EKLD RLM V+T YL G
Sbjct: 570 IVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSFAVHEKLDMRLMDVVTAYLYG 629
Query: 519 NLDSEIHMKI 548
NL+++I+M+I
Sbjct: 630 NLENDIYMRI 639
Score = 77.8 bits (190), Expect(3) = 2e-34
Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNLTQ---NKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GFN+ + + +N + + +R +YGLK S RMWYN L E +++EGY N+ ICPC+FIKK
Sbjct: 642 GFNMPEACKSNPKNIYSIKLQRSLYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVFIKK 701
Query: 730 FLNGFVILAVYVDNI 774
+ FVI+AVYVD++
Sbjct: 702 NGSNFVIIAVYVDDL 716
Score = 24.6 bits (52), Expect(3) = 2e-34
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 806 KKTASYLKKEFEMNDLSET 862
+ + YLKKEFE+ D +T
Sbjct: 726 QNSVEYLKKEFEIKDFGKT 744
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 91.7 bits (226), Expect(3) = 2e-34
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LV Q FSQRPGIDYEET+S V++ ITFR+LISL V E LD RLM V+TTYL G
Sbjct: 940 IIRYKARLVVQGFSQRPGIDYEETYSPVMNAITFRFLISLAVSEGLDIRLMDVITTYLYG 999
Query: 519 NLDSEIHMKI 548
++D++I+MKI
Sbjct: 1000 SMDNDIYMKI 1009
Score = 76.3 bits (186), Expect(3) = 2e-34
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 GFNL---TQNKYRNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKK 729
GF L K R+ + + +R +Y LK S RMWYN L EY+ +EGY NN ICPC+FIKK
Sbjct: 1012 GFKLPDANNTKPRSMYSIKLQRSLYELKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1071
Query: 730 FLNGFVILAVYVDNI 774
GF I+ VYVD++
Sbjct: 1072 SETGFAIIVVYVDDL 1086
Score = 28.1 bits (61), Expect(3) = 2e-34
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
+T +YLK EFEM DL +T
Sbjct: 1097 RTTNYLKNEFEMKDLGKT 1114
>gb|KYP69371.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 321
Score = 91.7 bits (226), Expect(3) = 3e-34
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +3
Query: 339 IQRYEAYLVAQRFSQRPGIDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLCG 518
I RY+A LVAQ FSQRPGID+EE +S V+D TFRYLISLVV EKL+ LM V+TTYL G
Sbjct: 95 IVRYKARLVAQGFSQRPGIDFEEIYSPVVDANTFRYLISLVVHEKLNLHLMDVVTTYLYG 154
Query: 519 NLDSEIHMKI 548
+LD++I+MK+
Sbjct: 155 SLDADIYMKL 164
Score = 79.3 bits (194), Expect(3) = 3e-34
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +1
Query: 559 GFNLTQNKY-RNTHCNR*KRVMYGLK*SERMWYNMLREYISREGYDNNSICPCMFIKKFL 735
GFNL + R + + + +YGLK S RMWYN L EY+ +EGY N+ ICPC+FIK+
Sbjct: 167 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSE 226
Query: 736 NGFVILAVYVDNI 774
NGF I+ VYVD+I
Sbjct: 227 NGFAIIVVYVDDI 239
Score = 24.6 bits (52), Expect(3) = 3e-34
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 809 KTASYLKKEFEMNDLSET 862
K LKKEFEM DL T
Sbjct: 250 KVIDCLKKEFEMKDLGRT 267