BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00025791
         (904 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009407493.1| PREDICTED: pentatricopeptide repeat-containi...   244   4e-74
gb|PKA48542.1| Pentatricopeptide repeat-containing protein [Apos...   229   4e-68
ref|XP_010931293.1| PREDICTED: pentatricopeptide repeat-containi...   222   2e-65
ref|XP_008778051.1| PREDICTED: pentatricopeptide repeat-containi...   208   3e-60
ref|XP_017641849.1| PREDICTED: pentatricopeptide repeat-containi...   206   2e-58
ref|XP_016665281.1| PREDICTED: pentatricopeptide repeat-containi...   204   4e-58
ref|XP_016665280.1| PREDICTED: pentatricopeptide repeat-containi...   204   5e-58
ref|XP_010272357.1| PREDICTED: pentatricopeptide repeat-containi...   201   1e-56
ref|XP_022756607.1| pentatricopeptide repeat-containing protein ...   201   1e-56
ref|XP_020101072.1| pentatricopeptide repeat-containing protein ...   197   1e-56
ref|XP_020697519.1| pentatricopeptide repeat-containing protein ...   199   2e-56
ref|XP_012471332.1| PREDICTED: pentatricopeptide repeat-containi...   200   3e-56
ref|XP_012471331.1| PREDICTED: pentatricopeptide repeat-containi...   200   3e-56
ref|XP_016740433.1| PREDICTED: pentatricopeptide repeat-containi...   199   4e-56
ref|XP_012471330.1| PREDICTED: pentatricopeptide repeat-containi...   200   4e-56
ref|XP_020101071.1| pentatricopeptide repeat-containing protein ...   197   4e-56
ref|XP_021278086.1| pentatricopeptide repeat-containing protein ...   199   5e-56
gb|PPD87579.1| hypothetical protein GOBAR_DD15484 [Gossypium bar...   198   1e-55
ref|XP_007016408.2| PREDICTED: pentatricopeptide repeat-containi...   198   1e-55
gb|EOY34026.1| Pentatricopeptide repeat (PPR-like) superfamily p...   198   1e-55

>ref|XP_009407493.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           [Musa acuminata subsp. malaccensis]
          Length = 491

 Score =  244 bits (624), Expect = 4e-74
 Identities = 134/264 (50%), Positives = 169/264 (64%)
 Frame = +2

Query: 113 HRPFTLIQRLIKTQPLQTPASISSIFDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXX 292
           H PF LIQ++IKTQP+  PA+ S IF LLI AH  S  P  A  Y   + L         
Sbjct: 5   HNPFLLIQKIIKTQPIHHPATTSLIFRLLIDAHIRSQKPCPAALYLDRM-LRCGLTPPIT 63

Query: 293 XXXXXXXXXXXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKF 472
                           +A SLF+ A  R P  D  S+ I+IRG C+ G  D A NL+ +F
Sbjct: 64  TFNRLLHLLLASDLLHTASSLFLDAKNRVPL-DAYSFGIMIRGLCDAGRLDEASNLMEEF 122

Query: 473 ERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRR 652
           E  G  P+VVMYT+LIDGC R G+FD A +LF +MK  G+ PNEFTYTVMI+GCFRNG  
Sbjct: 123 EAGGSPPSVVMYTTLIDGCCRRGSFDAARRLFDRMKGQGVAPNEFTYTVMISGCFRNGFS 182

Query: 653 DDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTL 832
           + GF L++EMKR GV PNL TY+ ++S+ CK ++L  AF++FDEM E+GV  NVVTYNTL
Sbjct: 183 NAGFELYDEMKRAGVFPNLYTYNVLMSQCCKSQDLVFAFQLFDEMTEKGVLPNVVTYNTL 242

Query: 833 IGGFCRKRRLRDAEKLLKRMRSKG 904
           IGGFCR+  ++DA KLL RM+  G
Sbjct: 243 IGGFCRQSMVKDATKLLVRMKDAG 266



 Score =  100 bits (248), Expect = 6e-20
 Identities = 54/169 (31%), Positives = 90/169 (53%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y++LI G+C  G    A  +LN+ ++ G +P+ + Y  LIDG  R G+   A   + +M
Sbjct: 273 TYNVLIDGYCRAGKMVKASRVLNQMKQNGHSPSTITYNVLIDGFSRAGDLVGAANAYREM 332

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  GL P   TYT++I+   R    D  F +   M+R G+A +  TY  ++   C   E+
Sbjct: 333 QDRGLTPTNVTYTILIDAFAREDDMDRAFEMHRSMERAGLAADAHTYGVLMRGLCMQGEM 392

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + A ++FD M ++G+    V  N +I G+CR+     A +LL+ M   G
Sbjct: 393 KDARKLFDAMKDKGLKPTDVINNMMIYGYCREGSSYRALRLLREMIGNG 441



 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 55/169 (32%), Positives = 86/169 (50%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G C       A  LL + +  G  P++V Y  LIDG  R G    A ++  +M
Sbjct: 238 TYNTLIGGFCRQSMVKDATKLLVRMKDAGLRPSLVTYNVLIDGYCRAGKMVKASRVLNQM 297

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  G  P+  TY V+I+G  R G        + EM+  G+ P  VTY+ +I    + +++
Sbjct: 298 KQNGHSPSTITYNVLIDGFSRAGDLVGAANAYREMQDRGLTPTNVTYTILIDAFAREDDM 357

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + AFE+   M   G++ +  TY  L+ G C +  ++DA KL   M+ KG
Sbjct: 358 DRAFEMHRSMERAGLAADAHTYGVLMRGLCMQGEMKDARKLFDAMKDKG 406



 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 57/169 (33%), Positives = 88/169 (52%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y++L+   C   D   A  L ++    G  PNVV Y +LI G  R     DA KL V+M
Sbjct: 203 TYNVLMSQCCKSQDLVFAFQLFDEMTEKGVLPNVVTYNTLIGGFCRQSMVKDATKLLVRM 262

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL P+  TY V+I+G  R G+      +  +MK+NG +P+ +TY+ +I    +  +L
Sbjct: 263 KDAGLRPSLVTYNVLIDGYCRAGKMVKASRVLNQMKQNGHSPSTITYNVLIDGFSRAGDL 322

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
             A   + EM +RG++   VTY  LI  F R+  +  A ++ + M   G
Sbjct: 323 VGAANAYREMQDRGLTPTNVTYTILIDAFAREDDMDRAFEMHRSMERAG 371



 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 53/176 (30%), Positives = 80/176 (45%)
 Frame = +2

Query: 377 SPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDA 556
           SPS+   +Y++LI G    GD   A N   + +  G  P  V YT LID   R  + D A
Sbjct: 303 SPST--ITYNVLIDGFSRAGDLVGAANAYREMQDRGLTPTNVTYTILIDAFAREDDMDRA 360

Query: 557 HKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISE 736
            ++   M+  GL  +  TY V++ G    G   D   LF+ MK  G+ P  V  + +I  
Sbjct: 361 FEMHRSMERAGLAADAHTYGVLMRGLCMQGEMKDARKLFDAMKDKGLKPTDVINNMMIYG 420

Query: 737 RCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            C+      A  +  EM   G+  N  +Y   I   C+  + ++AE LL ++   G
Sbjct: 421 YCREGSSYRALRLLREMIGNGMVPNAASYGLTIRVLCKDGKRQEAEVLLSKVIHSG 476


>gb|PKA48542.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 498

 Score =  229 bits (584), Expect = 4e-68
 Identities = 124/267 (46%), Positives = 161/267 (60%)
 Frame = +2

Query: 104 HHLHRPFTLIQRLIKTQPLQTPASISSIFDLLIAAHTHSGNPSAALHYARHLILDRXXXX 283
           HHL   F  I ++IKTQP+ TP S S IFDLLI AHT   N  AA+ Y   ++       
Sbjct: 6   HHLPLQFFRIPKMIKTQPVSTPLSTSLIFDLLIHAHTKFRNSEAAIFYLHRMLACSLVPK 65

Query: 284 XXXXXXXXXXXXXXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLL 463
                               A      AG R P  D CSY+I+I   C+ G+   AL L 
Sbjct: 66  SNTFNNLLLLLSSTHFPKALALLREANAGGRIPI-DACSYNIIISRLCDAGELTEALRLQ 124

Query: 464 NKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRN 643
             FE  GGAPN++MYT LI G  +NG+ D+  +LF +++ +GL PNEFTYT MINGCF+ 
Sbjct: 125 TLFESCGGAPNLIMYTILIAGHCKNGSLDEGRRLFSRLREMGLAPNEFTYTAMINGCFKR 184

Query: 644 GRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTY 823
           G R++G  L  EMK  GV PNL TY+S+++E CK   +++AF+VFDEM   G + NVV+Y
Sbjct: 185 GLREEGLQLCNEMKSVGVVPNLHTYNSLMAEYCKDCNMDNAFKVFDEMRLGGFAPNVVSY 244

Query: 824 NTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           N LIGG CR+ RL++AEKLL RMR +G
Sbjct: 245 NVLIGGLCRQSRLKEAEKLLGRMRKEG 271



 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 35/204 (17%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +++ILI G C  G    AL+LL+  +  G  P  + Y ++IDG  R+G+ + A   + +M
Sbjct: 278 TFNILINGFCKAGKMLKALSLLDCMKACGSCPTAITYNAIIDGFSRSGDLNGASCAYKEM 337

Query: 578 KAIGLDPNEFTYT-----------------------------------VMINGCFRNGRR 652
           K  GL+P E TYT                                   V+I G    GR 
Sbjct: 338 KERGLNPTEVTYTILIDAFARIGDMERAVQVYHLMESSGLRGDVHTVGVLIRGFCAEGRV 397

Query: 653 DDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTL 832
            +   LF  M   G+ P+ V Y +II   C       A ++  EMGE G+  NV +Y  +
Sbjct: 398 KNAASLFRMMLEKGLKPSNVIYETIIHGYCHEGSSFRALKLLREMGENGMVPNVGSYGMV 457

Query: 833 IGGFCRKRRLRDAEKLLKRMRSKG 904
           I   CR+ + R+AE LLK M+  G
Sbjct: 458 IRLLCREGKRREAEVLLKEMQGAG 481



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/169 (31%), Positives = 84/169 (49%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ L+  +C   + D A  + ++    G APNVV Y  LI G  R     +A KL  +M
Sbjct: 208 TYNSLMAEYCKDCNMDNAFKVFDEMRLGGFAPNVVSYNVLIGGLCRQSRLKEAEKLLGRM 267

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P+  T+ ++ING  + G+      L + MK  G  P  +TY++II    +  +L
Sbjct: 268 RKEGIRPSTITFNILINGFCKAGKMLKALSLLDCMKACGSCPTAITYNAIIDGFSRSGDL 327

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
             A   + EM ERG++   VTY  LI  F R   +  A ++   M S G
Sbjct: 328 NGASCAYKEMKERGLNPTEVTYTILIDAFARIGDMERAVQVYHLMESSG 376



 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 55/169 (32%), Positives = 85/169 (50%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           SY++LI G C       A  LL +  + G  P+ + +  LI+G  + G    A  L   M
Sbjct: 243 SYNVLIGGLCRQSRLKEAEKLLGRMRKEGIRPSTITFNILINGFCKAGKMLKALSLLDCM 302

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           KA G  P   TY  +I+G  R+G  +     ++EMK  G+ P  VTY+ +I    +  ++
Sbjct: 303 KACGSCPTAITYNAIIDGFSRSGDLNGASCAYKEMKERGLNPTEVTYTILIDAFARIGDM 362

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           E A +V+  M   G+  +V T   LI GFC + R+++A  L + M  KG
Sbjct: 363 ERAVQVYHLMESSGLRGDVHTVGVLIRGFCAEGRVKNAASLFRMMLEKG 411



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 39/135 (28%), Positives = 60/135 (44%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ILI     +GD + A+ + +  E +G   +V     LI G    G   +A  LF  M
Sbjct: 348 TYTILIDAFARIGDMERAVQVYHLMESSGLRGDVHTVGVLIRGFCAEGRVKNAASLFRMM 407

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
              GL P+   Y  +I+G    G       L  EM  NG+ PN+ +Y  +I   C+  + 
Sbjct: 408 LEKGLKPSNVIYETIIHGYCHEGSSFRALKLLREMGENGMVPNVGSYGMVIRLLCREGKR 467

Query: 758 ESAFEVFDEMGERGV 802
             A  +  EM   G+
Sbjct: 468 REAEVLLKEMQGAGL 482


>ref|XP_010931293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           [Elaeis guineensis]
          Length = 492

 Score =  222 bits (565), Expect = 2e-65
 Identities = 124/264 (46%), Positives = 157/264 (59%)
 Frame = +2

Query: 113 HRPFTLIQRLIKTQPLQTPASISSIFDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXX 292
           H PF LI R++KTQP  T    + IFDLLI+ +  S  P  A  Y   + L         
Sbjct: 6   HHPFNLIPRIVKTQPDST----ALIFDLLISTYVRSQKPDPAAFYLDRM-LRLGLNPKTR 60

Query: 293 XXXXXXXXXXXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKF 472
                            AR+LF  A  R    D  S+ I+IRG CN G+   A  LL +F
Sbjct: 61  TFNNLLHLLLASHRFPEARTLFQQARGRL-QLDSHSFGIMIRGLCNAGELGEASELLAQF 119

Query: 473 ERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRR 652
           + +G  PNVV++T+LIDG  +NG+ D A KLF +M+ IGL PN FTYT M+NG FR G R
Sbjct: 120 DESGEPPNVVLHTTLIDGFCKNGDLDQAKKLFARMREIGLIPNAFTYTTMMNGHFRKGLR 179

Query: 653 DDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTL 832
           +DGF L++EMKR G+ PNL TY+S+I E CK    + AF + DEM E GVS NVVTYN L
Sbjct: 180 NDGFQLYDEMKREGIPPNLYTYNSLICECCKDGSFDLAFNLLDEMRENGVSCNVVTYNAL 239

Query: 833 IGGFCRKRRLRDAEKLLKRMRSKG 904
           IGG C++++LRDAEKL   MR  G
Sbjct: 240 IGGMCKQKKLRDAEKLFGGMRRDG 263



 Score =  103 bits (258), Expect = 3e-21
 Identities = 59/173 (34%), Positives = 88/173 (50%)
 Frame = +2

Query: 383 SSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHK 562
           S +  +Y+ LI G C       A  L     R G  P++V +  LIDG  + G   +A  
Sbjct: 230 SCNVVTYNALIGGMCKQKKLRDAEKLFGGMRRDGLRPSLVTFNLLIDGYCKAGKISNALD 289

Query: 563 LFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERC 742
           +  +MKA G  P+  TY V+I G  R G        ++EMK  G+AP  +TY+ ++    
Sbjct: 290 VLAQMKATGCTPSIVTYNVLIAGFSRAGDLVGTAKAYKEMKERGLAPTKITYTILVDAFA 349

Query: 743 KGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           +  ++E AFE++  M   G+  +V TY  LI G C +  ++DA KL K MR K
Sbjct: 350 RRNDMERAFEMYQSMERAGLEVDVYTYGVLIRGLCSEGNMKDAWKLFKLMREK 402



 Score =  102 bits (254), Expect = 1e-20
 Identities = 52/169 (30%), Positives = 94/169 (55%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           ++++LI G+C  G    AL++L + + TG  P++V Y  LI G  R G+     K + +M
Sbjct: 270 TFNLLIDGYCKAGKISNALDVLAQMKATGCTPSIVTYNVLIAGFSRAGDLVGTAKAYKEM 329

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL P + TYT++++   R    +  F +++ M+R G+  ++ TY  +I   C    +
Sbjct: 330 KERGLAPTKITYTILVDAFARRNDMERAFEMYQSMERAGLEVDVYTYGVLIRGLCSEGNM 389

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + A+++F  M E+ +  + V Y+ +I G+CR+     A +LL+ MR  G
Sbjct: 390 KDAWKLFKLMREKALKPSNVIYDMMIYGYCREGSTYRALRLLREMRGNG 438



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPC--SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSL 517
           + +L VLA  ++    P   +Y++LI G    GD         + +  G AP  + YT L
Sbjct: 285 SNALDVLAQMKATGCTPSIVTYNVLIAGFSRAGDLVGTAKAYKEMKERGLAPTKITYTIL 344

Query: 518 IDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGV 697
           +D   R  + + A +++  M+  GL+ + +TY V+I G    G   D + LF+ M+   +
Sbjct: 345 VDAFARRNDMERAFEMYQSMERAGLEVDVYTYGVLIRGLCSEGNMKDAWKLFKLMREKAL 404

Query: 698 APNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEK 877
            P+ V Y  +I   C+      A  +  EM   G+  NV +YN  I   C + + ++AE 
Sbjct: 405 KPSNVIYDMMIYGYCREGSTYRALRLLREMRGNGLVPNVASYNVSIRVLCNEGKWQEAEV 464

Query: 878 LLKRMRSKG 904
           LL  M   G
Sbjct: 465 LLNEMLISG 473


>ref|XP_008778051.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           [Phoenix dactylifera]
          Length = 478

 Score =  208 bits (530), Expect = 3e-60
 Identities = 116/255 (45%), Positives = 151/255 (59%)
 Frame = +2

Query: 140 LIKTQPLQTPASISSIFDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXX 319
           ++KTQP  T    + IFDLLI+ +  S NP  A+ Y   + L                  
Sbjct: 1   MVKTQPDST----ALIFDLLISTYARSQNPDRAVFYLDRM-LRLGLNPKTPTFNNLLHLL 55

Query: 320 XXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNV 499
                   A  LF  A  R    D  S+ I+IRG CN G    A  LL +F+ +GG PNV
Sbjct: 56  LASHRFPEAHVLFQQARGRL-QLDSHSFGIMIRGLCNAGQLGEASELLTQFDESGGPPNV 114

Query: 500 VMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEE 679
           V++T+LIDG  +NG+ D A +LF +M+ IGL PN FTYT M+ G FR G R+DGF L++E
Sbjct: 115 VLHTTLIDGFCKNGDLDQAKRLFARMREIGLIPNVFTYTTMMRGHFRKGLRNDGFQLYDE 174

Query: 680 MKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRR 859
           MKR G+ PNL TY+S+ISERCK      AF + +EM E GVS NVVT+N LIGG C++++
Sbjct: 175 MKREGIPPNLYTYNSLISERCKDGSFNLAFNLLEEMRENGVSCNVVTFNALIGGLCKQKK 234

Query: 860 LRDAEKLLKRMRSKG 904
           LRDA KL  R+R  G
Sbjct: 235 LRDAAKLFGRIRRDG 249



 Score =  104 bits (259), Expect = 2e-21
 Identities = 53/169 (31%), Positives = 97/169 (57%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +++ILI G+C  G   +AL++L++ +  G +P++V Y  LI G  R G+   A K + +M
Sbjct: 256 TFNILIDGYCKAGKISSALDVLDQMKARGCSPSIVTYNVLIAGFSRAGDLVGAAKAYREM 315

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL P + TYT++++   R    +  F +++ M+R G+  ++ TY  +I   C    +
Sbjct: 316 KERGLAPTKVTYTILVDAFARRNDMERAFEMYQSMERAGLEVDVYTYGVLIRGLCSEGNM 375

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + A+++F  M E+ +  + V Y+ +I G+CR+     A +LL+ MR  G
Sbjct: 376 KDAWKLFKLMREKALKPSNVIYDMMIYGYCREGSTYRALRLLREMRENG 424



 Score =  103 bits (258), Expect = 3e-21
 Identities = 59/173 (34%), Positives = 88/173 (50%)
 Frame = +2

Query: 383 SSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHK 562
           S +  +++ LI G C       A  L  +  R G +P++V +  LIDG  + G    A  
Sbjct: 216 SCNVVTFNALIGGLCKQKKLRDAAKLFGRIRRDGLSPSLVTFNILIDGYCKAGKISSALD 275

Query: 563 LFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERC 742
           +  +MKA G  P+  TY V+I G  R G        + EMK  G+AP  VTY+ ++    
Sbjct: 276 VLDQMKARGCSPSIVTYNVLIAGFSRAGDLVGAAKAYREMKERGLAPTKVTYTILVDAFA 335

Query: 743 KGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           +  ++E AFE++  M   G+  +V TY  LI G C +  ++DA KL K MR K
Sbjct: 336 RRNDMERAFEMYQSMERAGLEVDVYTYGVLIRGLCSEGNMKDAWKLFKLMREK 388



 Score = 99.8 bits (247), Expect = 8e-20
 Identities = 52/169 (30%), Positives = 91/169 (53%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI   C  G  + A NLL +    G + NVV + +LI G  +     DA KLF ++
Sbjct: 186 TYNSLISERCKDGSFNLAFNLLEEMRENGVSCNVVTFNALIGGLCKQKKLRDAAKLFGRI 245

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  GL P+  T+ ++I+G  + G+      + ++MK  G +P++VTY+ +I+   +  +L
Sbjct: 246 RRDGLSPSLVTFNILIDGYCKAGKISSALDVLDQMKARGCSPSIVTYNVLIAGFSRAGDL 305

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
             A + + EM ERG++   VTY  L+  F R+  +  A ++ + M   G
Sbjct: 306 VGAAKAYREMKERGLAPTKVTYTILVDAFARRNDMERAFEMYQSMERAG 354



 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 53/174 (30%), Positives = 84/174 (48%)
 Frame = +2

Query: 371 ARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFD 550
           AR  S    +Y++LI G    GD   A     + +  G AP  V YT L+D   R  + +
Sbjct: 282 ARGCSPSIVTYNVLIAGFSRAGDLVGAAKAYREMKERGLAPTKVTYTILVDAFARRNDME 341

Query: 551 DAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSII 730
            A +++  M+  GL+ + +TY V+I G    G   D + LF+ M+   + P+ V Y  +I
Sbjct: 342 RAFEMYQSMERAGLEVDVYTYGVLIRGLCSEGNMKDAWKLFKLMREKALKPSNVIYDMMI 401

Query: 731 SERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              C+      A  +  EM E G+  N  +Y+T I   C + + ++AE LL  M
Sbjct: 402 YGYCREGSTYRALRLLREMRENGLVPNFASYSTSIRVLCNEGKWQEAEVLLNEM 455


>ref|XP_017641849.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           [Gossypium arboreum]
          Length = 560

 Score =  206 bits (523), Expect = 2e-58
 Identities = 111/254 (43%), Positives = 158/254 (62%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFMVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ ++A  LF KM+ IGL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEEAKLLFAKMEEIGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++ E C   +++ AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKEYCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  101 bits (252), Expect = 2e-20
 Identities = 59/173 (34%), Positives = 91/173 (52%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++ +RTG +PN++ Y SLIDG    G  + 
Sbjct: 296 RGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEK 355

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+   R         L +EM+  G+ P+ VTY+ +I 
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + E  E AFE++  M +  +  +V TY  LI G C K  ++DA KL   M
Sbjct: 416 AFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468



 Score =  100 bits (250), Expect = 4e-20
 Identities = 57/169 (33%), Positives = 91/169 (53%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y++LI G    G  +  L L  K +R G  P++  Y S++      G  D A ++F +M
Sbjct: 234 TYTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNSVMKEYCSEGKVDKAFEMFDEM 293

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+  N  TY ++I G  R  R  +   L ++MKR G++PNL+TY+S+I   C   +L
Sbjct: 294 RERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKL 353

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           E A  +F ++  +G S ++VTYN LI    R +      KL+K M  +G
Sbjct: 354 EKARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEMEERG 402



 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 54/168 (32%), Positives = 92/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+  FR+   +  F L+  M++  + P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT+I G+C++     A +LL+ MR K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREK 506



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/166 (32%), Positives = 87/166 (52%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ +C+ G  D A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKEYCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMR 895
            +  ++  EM ERG+  + VTY  +I  F R      A +L   M+
Sbjct: 389 TAIAKLVKEMEERGIRPSKVTYTIVIDAFFRSENTEKAFELYSFMQ 434



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 59/183 (32%), Positives = 90/183 (49%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D  A   L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
              R+ N + A +L+  M+   L P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRM 892
             M
Sbjct: 536 TEM 538



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 44/145 (30%), Positives = 67/145 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L +  ++    P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  MI+G  + G       L +EM+   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  +  EM E      V  YN +
Sbjct: 529 QEAEALVTEMVESRFKPTVSIYNLI 553


>ref|XP_016665281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like isoform X2 [Gossypium hirsutum]
          Length = 548

 Score =  204 bits (520), Expect = 4e-58
 Identities = 111/254 (43%), Positives = 156/254 (61%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFMVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ + A  LF KM  IGL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEQAKLLFAKMGEIGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++ E C   +++ AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKEHCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  102 bits (254), Expect = 1e-20
 Identities = 61/187 (32%), Positives = 97/187 (51%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A+ LF   G      +  +Y++LI G    G  +  L L  K +R G  P++  Y S++ 
Sbjct: 216 AKLLFAKMGEIGLVPNEYTYTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNSVMK 275

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
                G  D A ++F +M+  G+  N  TY ++I G  R  R  +   L ++MKR G++P
Sbjct: 276 EHCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSP 335

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           NL+TY+S+I   C   +LE A  +F ++  +G S ++VTYN LI    R +      KL+
Sbjct: 336 NLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLV 395

Query: 884 KRMRSKG 904
           K M  +G
Sbjct: 396 KEMEERG 402



 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 54/168 (32%), Positives = 92/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+  FR+   +  F L+  M++  + P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT+I G+C++     A +LL+ MR K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREK 506



 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 55/166 (33%), Positives = 87/166 (52%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ HC+ G  D A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKEHCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMR 895
            +  ++  EM ERG+  + VTY  +I  F R      A +L   M+
Sbjct: 389 TAIAKLVKEMEERGIRPSKVTYTIVIDAFFRSENTEKAFELYSFMQ 434



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 59/183 (32%), Positives = 90/183 (49%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D  A   L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
              R+ N + A +L+  M+   L P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRM 892
             M
Sbjct: 536 TEM 538



 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 41/132 (31%), Positives = 63/132 (47%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L +  ++    P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  MI+G  + G       L +EM+   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGE 793
           + A  +  EM E
Sbjct: 529 QEAEALVTEMVE 540


>ref|XP_016665280.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like isoform X1 [Gossypium hirsutum]
          Length = 560

 Score =  204 bits (520), Expect = 5e-58
 Identities = 111/254 (43%), Positives = 156/254 (61%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFMVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ + A  LF KM  IGL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEQAKLLFAKMGEIGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++ E C   +++ AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKEHCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  102 bits (254), Expect = 1e-20
 Identities = 61/187 (32%), Positives = 97/187 (51%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A+ LF   G      +  +Y++LI G    G  +  L L  K +R G  P++  Y S++ 
Sbjct: 216 AKLLFAKMGEIGLVPNEYTYTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNSVMK 275

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
                G  D A ++F +M+  G+  N  TY ++I G  R  R  +   L ++MKR G++P
Sbjct: 276 EHCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSP 335

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           NL+TY+S+I   C   +LE A  +F ++  +G S ++VTYN LI    R +      KL+
Sbjct: 336 NLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLV 395

Query: 884 KRMRSKG 904
           K M  +G
Sbjct: 396 KEMEERG 402



 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 54/168 (32%), Positives = 92/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+  FR+   +  F L+  M++  + P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT+I G+C++     A +LL+ MR K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREK 506



 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 55/166 (33%), Positives = 87/166 (52%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ HC+ G  D A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKEHCSEGKVDKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISASSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMR 895
            +  ++  EM ERG+  + VTY  +I  F R      A +L   M+
Sbjct: 389 TAIAKLVKEMEERGIRPSKVTYTIVIDAFFRSENTEKAFELYSFMQ 434



 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 60/187 (32%), Positives = 91/187 (48%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D  A   L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISASSRAKDSTAIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
              R+ N + A +L+  M+   L P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRMRSKG 904
             M   G
Sbjct: 536 TEMVESG 542



 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 45/145 (31%), Positives = 68/145 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L +  ++    P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFFRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  MI+G  + G       L +EM+   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  +  EM E G    V  YN +
Sbjct: 529 QEAEALVTEMVESGFKPTVSIYNLI 553


>ref|XP_010272357.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           [Nelumbo nucifera]
          Length = 566

 Score =  201 bits (511), Expect = 1e-56
 Identities = 98/172 (56%), Positives = 122/172 (70%)
 Frame = +2

Query: 389 DPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLF 568
           D  SY I+I+G C VGD      LL++ E+ G + NVV+YT+LIDGC +NG+ D A KLF
Sbjct: 166 DIYSYGIMIKGCCQVGDLSKGFELLSQLEKMGWSANVVIYTTLIDGCCKNGDIDQARKLF 225

Query: 569 VKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKG 748
            KM+ +GL  NEFTYT MINGCFR G   +GF L+EEMK  G  PN+ TY+S+IS  CK 
Sbjct: 226 SKMEKLGLVANEFTYTTMINGCFRKGFNKEGFELYEEMKLKGTLPNIYTYNSVISGYCKD 285

Query: 749 EELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
             L+ AFE+FDEM ERGV+ NVVTYNTLI G CR R+  +AEKL+ RM+  G
Sbjct: 286 GNLKKAFELFDEMHERGVACNVVTYNTLISGLCRVRKPVEAEKLVSRMKEAG 337



 Score =  107 bits (267), Expect = 2e-22
 Identities = 63/183 (34%), Positives = 93/183 (50%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A  LF     R  + +  +Y+ LI G C V     A  L+++ +  G +PN + Y +LID
Sbjct: 291 AFELFDEMHERGVACNVVTYNTLISGLCRVRKPVEAEKLVSRMKEAGLSPNSITYNTLID 350

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
           G  +    D A  LF KM++ G  P+  TY V+I G  R G  +    L  EM+   + P
Sbjct: 351 GFCKARKLDKASILFDKMRSTGQSPSLVTYNVLIAGFSRIGNFETAAFLAREMEERDIFP 410

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           + VTYS +I    K + +E A E+F  M + G+  +   Y  LI GFC K  ++DA KL 
Sbjct: 411 SKVTYSILIDALIKSDNMEKALEMFSSMEKAGLMADAYIYGILINGFCVKGNMKDASKLF 470

Query: 884 KRM 892
           + M
Sbjct: 471 RSM 473



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/174 (28%), Positives = 90/174 (51%)
 Frame = +2

Query: 383 SSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHK 562
           S +  +Y+ LI G C     D A  L +K   TG +P++V Y  LI G  R GNF+ A  
Sbjct: 339 SPNSITYNTLIDGFCKARKLDKASILFDKMRSTGQSPSLVTYNVLIAGFSRIGNFETAAF 398

Query: 563 LFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERC 742
           L  +M+   + P++ TY+++I+   ++   +    +F  M++ G+  +   Y  +I+  C
Sbjct: 399 LAREMEERDIFPSKVTYSILIDALIKSDNMEKALEMFSSMEKAGLMADAYIYGILINGFC 458

Query: 743 KGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
               ++ A ++F  M E  +  N + YN +I G+C++     A +LL++M   G
Sbjct: 459 VKGNMKDASKLFRSMSEVHLKPNDIIYNIMIYGYCKEGNSYRALRLLEKMHDNG 512



 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 2/179 (1%)
 Frame = +2

Query: 374 RSPSSDPC--SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNF 547
           RS    P   +Y++LI G   +G+ + A  L  + E     P+ V Y+ LID  +++ N 
Sbjct: 369 RSTGQSPSLVTYNVLIAGFSRIGNFETAAFLAREMEERDIFPSKVTYSILIDALIKSDNM 428

Query: 548 DDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSI 727
           + A ++F  M+  GL  + + Y ++ING    G   D   LF  M    + PN + Y+ +
Sbjct: 429 EKALEMFSSMEKAGLMADAYIYGILINGFCVKGNMKDASKLFRSMSEVHLKPNDIIYNIM 488

Query: 728 ISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           I   CK      A  + ++M + G+  N+ +Y+  IG  C+  + ++AE LL  M   G
Sbjct: 489 IYGYCKEGNSYRALRLLEKMHDNGMLPNMASYSLTIGILCKDGKWQEAEVLLNEMVGLG 547



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 46/136 (33%), Positives = 68/136 (50%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +YSILI       + + AL + +  E+ G   +  +Y  LI+G    GN  DA KLF  M
Sbjct: 414 TYSILIDALIKSDNMEKALEMFSSMEKAGLMADAYIYGILINGFCVKGNMKDASKLFRSM 473

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y +MI G  + G       L E+M  NG+ PN+ +YS  I   CK  + 
Sbjct: 474 SEVHLKPNDIIYNIMIYGYCKEGNSYRALRLLEKMHDNGMLPNMASYSLTIGILCKDGKW 533

Query: 758 ESAFEVFDEMGERGVS 805
           + A  + +EM   G+S
Sbjct: 534 QEAEVLLNEMVGLGLS 549


>ref|XP_022756607.1| pentatricopeptide repeat-containing protein At4g11690 [Durio
           zibethinus]
 ref|XP_022756608.1| pentatricopeptide repeat-containing protein At4g11690 [Durio
           zibethinus]
 ref|XP_022756609.1| pentatricopeptide repeat-containing protein At4g11690 [Durio
           zibethinus]
          Length = 563

 Score =  201 bits (510), Expect = 1e-56
 Identities = 112/264 (42%), Positives = 157/264 (59%), Gaps = 2/264 (0%)
 Frame = +2

Query: 119 PFTLIQRLIKTQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXX 292
           P +L Q L  TQP   P S++ I  ++ +I AH  S  P  A++Y   ++ DR       
Sbjct: 76  PLSLFQHL--TQPTLNPNSMNQIPLYESIINAHVRSQLPDQAIYYFNQMV-DRNLVAGPN 132

Query: 293 XXXXXXXXXXXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKF 472
                            A  LF  +  R    D  S+ I+I+G C  G    +  LL + 
Sbjct: 133 TLNNIMSFLIKFDSFEKAWILFTKSKGRV-KFDVYSFGIMIKGCCKAGYLSKSFELLGQV 191

Query: 473 ERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRR 652
           E  G +PNVV+YT+LIDGC + G+F+ A   F KM+ +GL PNE+TYTV+ING F+ G +
Sbjct: 192 EELGLSPNVVIYTTLIDGCCKMGDFEQAKTFFCKMEELGLVPNEYTYTVLINGLFKKGLK 251

Query: 653 DDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTL 832
            +GF L+E+M+ NGV P+L TY+S+++E C   ++  AFE+FDEM ERGV+ NVVTYN L
Sbjct: 252 KEGFELYEKMQLNGVIPSLYTYNSLMNEFCNEGKVSKAFEMFDEMRERGVACNVVTYNIL 311

Query: 833 IGGFCRKRRLRDAEKLLKRMRSKG 904
           IGG CRK R+ +AEKLL +M+  G
Sbjct: 312 IGGLCRKTRIWEAEKLLDQMKRTG 335



 Score =  112 bits (279), Expect = 6e-24
 Identities = 62/173 (35%), Positives = 98/173 (56%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  LL++ +RTG +PN++ Y SL+DG    G  + 
Sbjct: 299 RGVACNVVTYNILIGGLCRKTRIWEAEKLLDQMKRTGISPNLITYNSLLDGFCNVGKLER 358

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  +F ++K  GL P+  TY ++I+G  R        GL +EM+  G+ P+ VTY++II 
Sbjct: 359 AKYIFDQLKTKGLSPSLITYNILISGFSRARDLAVVAGLVKEMEERGIRPSKVTYTTIID 418

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + E ++ AFE++  M + G+  +V TY  L+ G C K  ++DA KL K M
Sbjct: 419 AFIRSENIDKAFELYLFMQKAGLVPDVYTYGVLVHGLCTKGNMKDAWKLFKSM 471



 Score =  109 bits (272), Expect = 5e-23
 Identities = 60/187 (32%), Positives = 99/187 (52%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A+ +F     +  S    +Y+ILI G     D      L+ + E  G  P+ V YT++ID
Sbjct: 359 AKYIFDQLKTKGLSPSLITYNILISGFSRARDLAVVAGLVKEMEERGIRPSKVTYTTIID 418

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N D A +L++ M+  GL P+ +TY V+++G    G   D + LF+ M+   + P
Sbjct: 419 AFIRSENIDKAFELYLFMQKAGLVPDVYTYGVLVHGLCTKGNMKDAWKLFKSMEEMQLKP 478

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EMGE+G+  NV +Y++ IG  C+  + ++AE L+
Sbjct: 479 NDVIYNTMIHGYCKEGSSYRALRLLQEMGEKGLVPNVASYSSTIGLLCKDCKWQEAEALV 538

Query: 884 KRMRSKG 904
             M   G
Sbjct: 539 NEMIESG 545



 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 54/169 (31%), Positives = 87/169 (51%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ L+   CN G    A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 272 TYNSLMNEFCNEGKVSKAFEMFDEMRERGVACNVVTYNILIGGLCRKTRIWEAEKLLDQM 331

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  G+ PN  TY  +++G    G+ +    +F+++K  G++P+L+TY+ +IS   +  +L
Sbjct: 332 KRTGISPNLITYNSLLDGFCNVGKLERAKYIFDQLKTKGLSPSLITYNILISGFSRARDL 391

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
                +  EM ERG+  + VTY T+I  F R   +  A +L   M+  G
Sbjct: 392 AVVAGLVKEMEERGIRPSKVTYTTIIDAFIRSENIDKAFELYLFMQKAG 440



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
 Frame = +2

Query: 344 ARSLFVLAGA------RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVM 505
           AR L V+AG       R       +Y+ +I       + D A  L    ++ G  P+V  
Sbjct: 388 ARDLAVVAGLVKEMEERGIRPSKVTYTTIIDAFIRSENIDKAFELYLFMQKAGLVPDVYT 447

Query: 506 YTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMK 685
           Y  L+ G    GN  DA KLF  M+ + L PN+  Y  MI+G  + G       L +EM 
Sbjct: 448 YGVLVHGLCTKGNMKDAWKLFKSMEEMQLKPNDVIYNTMIHGYCKEGSSYRALRLLQEMG 507

Query: 686 RNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTL 832
             G+ PN+ +YSS I   CK  + + A  + +EM E G    V  YN +
Sbjct: 508 EKGLVPNVASYSSTIGLLCKDCKWQEAEALVNEMIESGFKPTVSIYNLI 556


>ref|XP_020101072.1| pentatricopeptide repeat-containing protein At4g11690-like isoform
           X2 [Ananas comosus]
 ref|XP_020101073.1| pentatricopeptide repeat-containing protein At4g11690-like isoform
           X2 [Ananas comosus]
          Length = 421

 Score =  197 bits (501), Expect = 1e-56
 Identities = 96/178 (53%), Positives = 127/178 (71%)
 Frame = +2

Query: 371 ARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFD 550
           A++   D  S+SI+I G C  G    AL+LL  FE  GG PNVVMYT+LIDGC +NG+ +
Sbjct: 68  AKTSPLDCFSFSIMIHGFCFSGQLRGALDLLTLFESRGGPPNVVMYTTLIDGCCKNGDLE 127

Query: 551 DAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSII 730
           +A +LF ++  +GL PNE TYTVMING FR+G +  GF L+ EM+  GV PNL TY+S+I
Sbjct: 128 EAERLFKRIGEVGLVPNELTYTVMINGYFRHGLQRHGFDLYNEMRGKGVLPNLYTYNSLI 187

Query: 731 SERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           +E C+  +L+ AF++FDEM E GVS NVVTYNTL+GG CR++R  DA KL  +M  +G
Sbjct: 188 AECCRCRDLDRAFKLFDEMRESGVSHNVVTYNTLLGGLCREKRTTDALKLFDKMTKEG 245



 Score =  100 bits (250), Expect = 2e-20
 Identities = 57/173 (32%), Positives = 87/173 (50%)
 Frame = +2

Query: 383 SSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHK 562
           S +  +Y+ L+ G C       AL L +K  + G  PN++ +  LIDG  + GN   A  
Sbjct: 212 SHNVVTYNTLLGGLCREKRTTDALKLFDKMTKEGIRPNLITFNLLIDGYGKEGNMSKAMS 271

Query: 563 LFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERC 742
               MK  G  PN  TY ++ING  + G       ++ EMK   ++P  VTY+ +I    
Sbjct: 272 TLDYMKVSGFLPNIVTYNMLINGFSQAGDLVGTANIYREMKERDLSPTKVTYTILIDAFA 331

Query: 743 KGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           +G +++ AF+V+  M   G   +V TY  L+ G C +  L+DA KL + M  K
Sbjct: 332 RGNDMKRAFDVYYAMERAGKEVDVYTYGVLMRGLCEEGNLKDAWKLFESMSEK 384



 Score = 94.7 bits (234), Expect = 3e-18
 Identities = 55/169 (32%), Positives = 83/169 (49%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI   C   D D A  L ++   +G + NVV Y +L+ G  R     DA KLF KM
Sbjct: 182 TYNSLIAECCRCRDLDRAFKLFDEMRESGVSHNVVTYNTLLGGLCREKRTTDALKLFDKM 241

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
              G+ PN  T+ ++I+G  + G         + MK +G  PN+VTY+ +I+   +  +L
Sbjct: 242 TKEGIRPNLITFNLLIDGYGKEGNMSKAMSTLDYMKVSGFLPNIVTYNMLINGFSQAGDL 301

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
                ++ EM ER +S   VTY  LI  F R   ++ A  +   M   G
Sbjct: 302 VGTANIYREMKERDLSPTKVTYTILIDAFARGNDMKRAFDVYYAMERAG 350



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/152 (27%), Positives = 83/152 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           ++++LI G+   G+   A++ L+  + +G  PN+V Y  LI+G  + G+      ++ +M
Sbjct: 252 TFNLLIDGYGKEGNMSKAMSTLDYMKVSGFLPNIVTYNMLINGFSQAGDLVGTANIYREM 311

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K   L P + TYT++I+   R       F ++  M+R G   ++ TY  ++   C+   L
Sbjct: 312 KERDLSPTKVTYTILIDAFARGNDMKRAFDVYYAMERAGKEVDVYTYGVLMRGLCEEGNL 371

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRK 853
           + A+++F+ M E+    + V Y+T+I G C++
Sbjct: 372 KDAWKLFESMSEKKQKPSNVIYDTMIYGHCKE 403


>ref|XP_020697519.1| pentatricopeptide repeat-containing protein At4g11690 [Dendrobium
           catenatum]
 ref|XP_020697521.1| pentatricopeptide repeat-containing protein At4g11690 [Dendrobium
           catenatum]
 ref|XP_020697522.1| pentatricopeptide repeat-containing protein At4g11690 [Dendrobium
           catenatum]
          Length = 500

 Score =  199 bits (506), Expect = 2e-56
 Identities = 116/267 (43%), Positives = 158/267 (59%), Gaps = 4/267 (1%)
 Frame = +2

Query: 116 RPFTLIQRLIKTQPLQTPASISS--IFDLLIAAHTHSGNPSAALHYARHLILDRXXXXXX 289
           R F L+Q++IK+Q   +P S +S  IF+L+I AH     P  +L Y  H +LD       
Sbjct: 6   RTFHLMQKMIKSQKFSSPQSSTSSQIFNLMIDAHIKLRKPEPSLFYL-HRMLD-CGLVPT 63

Query: 290 XXXXXXXXXXXXXXXXXSARSLF--VLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLL 463
                             A +LF    A  R P  D  S++I+I   C+ G  D AL L 
Sbjct: 64  SNTFNNLLLLLSTSHLPKALTLFHNAYANGRIPL-DAYSFNIVISRLCHSGQLDEALQLQ 122

Query: 464 NKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRN 643
             FER GG PN+VM+T+LIDG  +NG+ +++ +LF++M+ +GL PNEFTYT M+NG FR 
Sbjct: 123 TLFERRGGVPNLVMFTTLIDGHCKNGSLEESRQLFIRMRELGLAPNEFTYTAMMNGYFRQ 182

Query: 644 GRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTY 823
           G + +G  L++EMK  GV PNL TY+S+++E CK   L+ AF +FDEM   G   NVV+Y
Sbjct: 183 GFKKEGIQLYDEMKCVGVVPNLYTYNSLMAEYCKDYNLDPAFNLFDEMRHSGFVPNVVSY 242

Query: 824 NTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           N LIGG CR RRL+DA  LL  M+  G
Sbjct: 243 NILIGGLCRLRRLKDAVDLLGNMKEVG 269



 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 53/175 (30%), Positives = 95/175 (54%)
 Frame = +2

Query: 380 PSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAH 559
           PSS   +++IL++G C  G    A+ LL++ + +G +P  + Y +LI   L++ +   A 
Sbjct: 272 PSS--ITFNILMKGFCKAGSMPTAMKLLDEMKASGSSPTAITYNTLIAAFLKSADLVGAA 329

Query: 560 KLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISER 739
             + +MK  GL P + TYT++I+   RNG  +  FG++  M+R G+  ++ T+  +I   
Sbjct: 330 SAYKEMKERGLHPTQATYTILIDAFARNGDMEMAFGIYHSMERFGLQGDVYTFGVLIRGL 389

Query: 740 CKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           C    ++SA  +F  M    +  + V Y+TLI G+C +     + +LL+ M   G
Sbjct: 390 CTEGSMKSAMNLFRSMISMRLKPSNVIYDTLIFGYCSQGSTFRSLQLLREMTGNG 444



 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 50/151 (33%), Positives = 77/151 (50%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ L+  +C   + D A NL ++   +G  PNVV Y  LI G  R     DA  L   M
Sbjct: 206 TYNSLMAEYCKDYNLDPAFNLFDEMRHSGFVPNVVSYNILIGGLCRLRRLKDAVDLLGNM 265

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K +G+ P+  T+ +++ G  + G       L +EMK +G +P  +TY+++I+   K  +L
Sbjct: 266 KEVGIRPSSITFNILMKGFCKAGSMPTAMKLLDEMKASGSSPTAITYNTLIAAFLKSADL 325

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCR 850
             A   + EM ERG+     TY  LI  F R
Sbjct: 326 VGAASAYKEMKERGLHPTQATYTILIDAFAR 356



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 49/167 (29%), Positives = 81/167 (48%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           SY+ILI G C +     A++LL   +  G  P+ + +  L+ G  + G+   A KL  +M
Sbjct: 241 SYNILIGGLCRLRRLKDAVDLLGNMKEVGIRPSSITFNILMKGFCKAGSMPTAMKLLDEM 300

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           KA G  P   TY  +I    ++         ++EMK  G+ P   TY+ +I    +  ++
Sbjct: 301 KASGSSPTAITYNTLIAAFLKSADLVGAASAYKEMKERGLHPTQATYTILIDAFARNGDM 360

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRS 898
           E AF ++  M   G+  +V T+  LI G C +  ++ A  L + M S
Sbjct: 361 EMAFGIYHSMERFGLQGDVYTFGVLIRGLCTEGSMKSAMNLFRSMIS 407



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 42/145 (28%), Positives = 62/145 (42%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ILI      GD + A  + +  ER G   +V  +  LI G    G+   A  LF  M
Sbjct: 346 TYTILIDAFARNGDMEMAFGIYHSMERFGLQGDVYTFGVLIRGLCTEGSMKSAMNLFRSM 405

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
            ++ L P+   Y  +I G    G       L  EM  NG+ PN+ +Y   I   CK  + 
Sbjct: 406 ISMRLKPSNVIYDTLIFGYCSQGSTFRSLQLLREMTGNGMVPNISSYGLTIRLLCKQGKF 465

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  + +EM   G   N   Y  +
Sbjct: 466 KEAEVLLNEMQVAGFLPNDWIYRAI 490


>ref|XP_012471332.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           isoform X3 [Gossypium raimondii]
          Length = 560

 Score =  200 bits (508), Expect = 3e-56
 Identities = 109/254 (42%), Positives = 155/254 (61%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFVVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ + A  LF KM+ +GL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++   C   ++  AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  102 bits (253), Expect = 2e-20
 Identities = 59/173 (34%), Positives = 92/173 (53%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++ +RTG +PN++ Y SLIDG    G  + 
Sbjct: 296 RGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEK 355

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+   R         L +EM+  G+ P+ VTY+ +I 
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + +  E AFE++  M + G+  +V TY  LI G C K  ++DA KL   M
Sbjct: 416 AFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468



 Score =  100 bits (249), Expect = 6e-20
 Identities = 59/187 (31%), Positives = 93/187 (49%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D      L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L++ M+  GL P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y++++   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRMRSKG 904
             M   G
Sbjct: 536 TEMVESG 542



 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 52/168 (30%), Positives = 92/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+   R+   +  F L+  M++ G+ P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT++ G+C++     A +LL+ M+ K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEK 506



 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 54/169 (31%), Positives = 88/169 (52%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ +C+ G    A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            +  ++  EM ERG+  + VTY  +I  F R +    A +L   M+  G
Sbjct: 389 TTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKAFELYLFMQKAG 437



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 46/145 (31%), Positives = 68/145 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L    ++ G  P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  M++G  + G       L +EMK   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  +  EM E G    V  YN +
Sbjct: 529 QEAEALVTEMVESGFKPTVSIYNLI 553


>ref|XP_012471331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           isoform X2 [Gossypium raimondii]
          Length = 577

 Score =  200 bits (508), Expect = 3e-56
 Identities = 109/254 (42%), Positives = 155/254 (61%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFVVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ + A  LF KM+ +GL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++   C   ++  AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  102 bits (253), Expect = 2e-20
 Identities = 59/173 (34%), Positives = 92/173 (53%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++ +RTG +PN++ Y SLIDG    G  + 
Sbjct: 296 RGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEK 355

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+   R         L +EM+  G+ P+ VTY+ +I 
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + +  E AFE++  M + G+  +V TY  LI G C K  ++DA KL   M
Sbjct: 416 AFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468



 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 58/183 (31%), Positives = 92/183 (50%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D      L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L++ M+  GL P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y++++   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRM 892
             M
Sbjct: 536 TEM 538



 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 52/168 (30%), Positives = 92/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+   R+   +  F L+  M++ G+ P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT++ G+C++     A +LL+ M+ K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEK 506



 Score = 94.7 bits (234), Expect = 6e-18
 Identities = 54/169 (31%), Positives = 88/169 (52%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ +C+ G    A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            +  ++  EM ERG+  + VTY  +I  F R +    A +L   M+  G
Sbjct: 389 TTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKAFELYLFMQKAG 437



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 48/168 (28%), Positives = 78/168 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L    ++ G  P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  M++G  + G       L +EMK   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A  +  EM E     + + Y        +++ ++DA   + +MR K
Sbjct: 529 QEAEALVTEMVESDNRNSWMRY------ILKEKEMQDA---VNKMRPK 567


>ref|XP_016740433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Gossypium hirsutum]
          Length = 560

 Score =  199 bits (507), Expect = 4e-56
 Identities = 110/254 (43%), Positives = 154/254 (60%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFVVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ + A  LF KM  IGL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEQAKLLFAKMGEIGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++   C   ++  AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  103 bits (256), Expect = 7e-21
 Identities = 61/187 (32%), Positives = 97/187 (51%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A+ LF   G      +  +Y++LI G    G  +  L L  K +R G  P++  Y S++ 
Sbjct: 216 AKLLFAKMGEIGLVPNEYTYTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNSVMK 275

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
                G    A ++F +M+  G+  N  TY ++I G  R  R  +   L ++MKR G++P
Sbjct: 276 VYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSP 335

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           NL+TY+S+I   C   +LE A  +F ++  +G S ++VTYN LI  F R +      KL+
Sbjct: 336 NLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLV 395

Query: 884 KRMRSKG 904
           K M  +G
Sbjct: 396 KEMEERG 402



 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 53/168 (31%), Positives = 91/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+   R+   +  F L+  M++  + P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFIRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT+I G+C++     A +LL+ MR K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREK 506



 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 59/187 (31%), Positives = 91/187 (48%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D      L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L+  M+   L P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFIRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRMRSKG 904
             M   G
Sbjct: 536 TEMVESG 542



 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 53/166 (31%), Positives = 86/166 (51%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ +C+ G    A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMR 895
            +  ++  EM ERG+  + VTY  +I  F R      A +L   M+
Sbjct: 389 TTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSENTEKAFELYSFMQ 434



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 45/145 (31%), Positives = 68/145 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L +  ++    P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFIRSENTEKAFELYSFMQKASLVPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  MI+G  + G       L +EM+   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMIHGYCKQGSSYRALRLLQEMREKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  +  EM E G    V  YN +
Sbjct: 529 QEAEALVTEMVESGFKPTVSIYNLI 553


>ref|XP_012471330.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           isoform X1 [Gossypium raimondii]
          Length = 580

 Score =  200 bits (508), Expect = 4e-56
 Identities = 109/254 (42%), Positives = 155/254 (61%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFVVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ + A  LF KM+ +GL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++   C   ++  AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  102 bits (253), Expect = 2e-20
 Identities = 59/173 (34%), Positives = 92/173 (53%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++ +RTG +PN++ Y SLIDG    G  + 
Sbjct: 296 RGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEK 355

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+   R         L +EM+  G+ P+ VTY+ +I 
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + +  E AFE++  M + G+  +V TY  LI G C K  ++DA KL   M
Sbjct: 416 AFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468



 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 58/183 (31%), Positives = 92/183 (50%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D      L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L++ M+  GL P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y++++   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRM 892
             M
Sbjct: 536 TEM 538



 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 52/168 (30%), Positives = 92/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+   R+   +  F L+  M++ G+ P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT++ G+C++     A +LL+ M+ K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEK 506



 Score = 94.7 bits (234), Expect = 6e-18
 Identities = 54/169 (31%), Positives = 88/169 (52%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ +C+ G    A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            +  ++  EM ERG+  + VTY  +I  F R +    A +L   M+  G
Sbjct: 389 TTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKAFELYLFMQKAG 437



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 48/168 (28%), Positives = 78/168 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L    ++ G  P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  M++G  + G       L +EMK   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A  +  EM E     + + Y        +++ ++DA   + +MR K
Sbjct: 529 QEAEALVTEMVESDNRNSWMRY------ILKEKEMQDA---VNKMRPK 567


>ref|XP_020101071.1| pentatricopeptide repeat-containing protein At4g11690-like isoform
           X1 [Ananas comosus]
          Length = 468

 Score =  197 bits (501), Expect = 4e-56
 Identities = 96/178 (53%), Positives = 127/178 (71%)
 Frame = +2

Query: 371 ARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFD 550
           A++   D  S+SI+I G C  G    AL+LL  FE  GG PNVVMYT+LIDGC +NG+ +
Sbjct: 68  AKTSPLDCFSFSIMIHGFCFSGQLRGALDLLTLFESRGGPPNVVMYTTLIDGCCKNGDLE 127

Query: 551 DAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSII 730
           +A +LF ++  +GL PNE TYTVMING FR+G +  GF L+ EM+  GV PNL TY+S+I
Sbjct: 128 EAERLFKRIGEVGLVPNELTYTVMINGYFRHGLQRHGFDLYNEMRGKGVLPNLYTYNSLI 187

Query: 731 SERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           +E C+  +L+ AF++FDEM E GVS NVVTYNTL+GG CR++R  DA KL  +M  +G
Sbjct: 188 AECCRCRDLDRAFKLFDEMRESGVSHNVVTYNTLLGGLCREKRTTDALKLFDKMTKEG 245



 Score =  100 bits (250), Expect = 3e-20
 Identities = 57/173 (32%), Positives = 87/173 (50%)
 Frame = +2

Query: 383 SSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHK 562
           S +  +Y+ L+ G C       AL L +K  + G  PN++ +  LIDG  + GN   A  
Sbjct: 212 SHNVVTYNTLLGGLCREKRTTDALKLFDKMTKEGIRPNLITFNLLIDGYGKEGNMSKAMS 271

Query: 563 LFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERC 742
               MK  G  PN  TY ++ING  + G       ++ EMK   ++P  VTY+ +I    
Sbjct: 272 TLDYMKVSGFLPNIVTYNMLINGFSQAGDLVGTANIYREMKERDLSPTKVTYTILIDAFA 331

Query: 743 KGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           +G +++ AF+V+  M   G   +V TY  L+ G C +  L+DA KL + M  K
Sbjct: 332 RGNDMKRAFDVYYAMERAGKEVDVYTYGVLMRGLCEEGNLKDAWKLFESMSEK 384



 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 55/169 (32%), Positives = 83/169 (49%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI   C   D D A  L ++   +G + NVV Y +L+ G  R     DA KLF KM
Sbjct: 182 TYNSLIAECCRCRDLDRAFKLFDEMRESGVSHNVVTYNTLLGGLCREKRTTDALKLFDKM 241

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
              G+ PN  T+ ++I+G  + G         + MK +G  PN+VTY+ +I+   +  +L
Sbjct: 242 TKEGIRPNLITFNLLIDGYGKEGNMSKAMSTLDYMKVSGFLPNIVTYNMLINGFSQAGDL 301

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
                ++ EM ER +S   VTY  LI  F R   ++ A  +   M   G
Sbjct: 302 VGTANIYREMKERDLSPTKVTYTILIDAFARGNDMKRAFDVYYAMERAG 350



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/169 (28%), Positives = 91/169 (53%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           ++++LI G+   G+   A++ L+  + +G  PN+V Y  LI+G  + G+      ++ +M
Sbjct: 252 TFNLLIDGYGKEGNMSKAMSTLDYMKVSGFLPNIVTYNMLINGFSQAGDLVGTANIYREM 311

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K   L P + TYT++I+   R       F ++  M+R G   ++ TY  ++   C+   L
Sbjct: 312 KERDLSPTKVTYTILIDAFARGNDMKRAFDVYYAMERAGKEVDVYTYGVLMRGLCEEGNL 371

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + A+++F+ M E+    + V Y+T+I G C++     A +L+K MR  G
Sbjct: 372 KDAWKLFESMSEKKQKPSNVIYDTMIYGHCKEGSSYRALRLVKEMRDNG 420



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 48/165 (29%), Positives = 75/165 (45%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y++LI G    GD     N+  + +    +P  V YT LID   R  +   A  ++  M
Sbjct: 287 TYNMLINGFSQAGDLVGTANIYREMKERDLSPTKVTYTILIDAFARGNDMKRAFDVYYAM 346

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G + + +TY V++ G    G   D + LFE M      P+ V Y ++I   CK    
Sbjct: 347 ERAGKEVDVYTYGVLMRGLCEEGNLKDAWKLFESMSEKKQKPSNVIYDTMIYGHCKEGSS 406

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
             A  +  EM + G+  NV +Y   I    +  +L +AE LL  M
Sbjct: 407 YRALRLVKEMRDNGLVPNVASYGLTIRLLVKDGKLCEAEALLNEM 451



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 43/138 (31%), Positives = 59/138 (42%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  S    +Y+ILI       D   A ++    ER G   +V  Y  L+ G    GN  D
Sbjct: 314 RDLSPTKVTYTILIDAFARGNDMKRAFDVYYAMERAGKEVDVYTYGVLMRGLCEEGNLKD 373

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A KLF  M      P+   Y  MI G  + G       L +EM+ NG+ PN+ +Y   I 
Sbjct: 374 AWKLFESMSEKKQKPSNVIYDTMIYGHCKEGSSYRALRLVKEMRDNGLVPNVASYGLTIR 433

Query: 734 ERCKGEELESAFEVFDEM 787
              K  +L  A  + +EM
Sbjct: 434 LLVKDGKLCEAEALLNEM 451


>ref|XP_021278086.1| pentatricopeptide repeat-containing protein At4g11690 [Herrania
           umbratica]
          Length = 563

 Score =  199 bits (506), Expect = 5e-56
 Identities = 111/262 (42%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
 Frame = +2

Query: 125 TLIQRLIKTQPLQTPASISS--IFDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXX 298
           +L Q L  TQP   P S++   +++ +I AH  S  P  A++Y   ++ DR         
Sbjct: 78  SLFQHL--TQPDLYPNSMNQTLLYESIINAHVQSQLPDQAIYYFNQMV-DRNLVVGPNTL 134

Query: 299 XXXXXXXXXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFER 478
                          A  LF  +  R    D  S+ I+I+G C  GD   +  L+ + E 
Sbjct: 135 NNIMSFLIKFDSFDKAWMLFTKSKGRV-KLDVYSFGIMIKGCCEAGDLSKSFELIGQVEE 193

Query: 479 TGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDD 658
            G +PNVV+YT+LIDGC +NG+FD A  LF +M+ +GL PNE+TYTV+ING F+ G + D
Sbjct: 194 LGLSPNVVIYTTLIDGCCKNGDFDKAKMLFCRMEELGLVPNEYTYTVLINGFFKKGLKKD 253

Query: 659 GFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIG 838
           GF L+E+M+ NGV PNL TY+ +++E C   ++  AFE+F EM ERGV+ NVVTYN LIG
Sbjct: 254 GFLLYEKMQLNGVIPNLYTYNCVMNEYCSEGKVNKAFEMFGEMRERGVACNVVTYNILIG 313

Query: 839 GFCRKRRLRDAEKLLKRMRSKG 904
           G CR+ ++ DAEKL+ RM   G
Sbjct: 314 GLCRETKVWDAEKLVDRMTRAG 335



 Score =  106 bits (265), Expect = 4e-22
 Identities = 61/173 (35%), Positives = 95/173 (54%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++  R G +PN++ Y SLIDG    G F+ 
Sbjct: 299 RGVACNVVTYNILIGGLCRETKVWDAEKLVDRMTRAGISPNLITYNSLIDGFCNVGKFEK 358

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+G  R        GL +EM+  G++P+ VTY+ +I 
Sbjct: 359 AMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEMEERGISPSKVTYTIVID 418

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + E  E AFE++  M + G+  +V T+  LI G C K  +++A KL K M
Sbjct: 419 AFIRSENTERAFELYLFMQKAGLVPDVYTFGVLIHGLCTKGSMKEAGKLFKSM 471



 Score =  102 bits (255), Expect = 9e-21
 Identities = 61/187 (32%), Positives = 97/187 (51%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A  LF     +  S    +Y+ILI G     D  A   L+ + E  G +P+ V YT +ID
Sbjct: 359 AMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEMEERGISPSKVTYTIVID 418

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L++ M+  GL P+ +T+ V+I+G    G   +   LF+ M    + P
Sbjct: 419 AFIRSENTERAFELYLFMQKAGLVPDVYTFGVLIHGLCTKGSMKEAGKLFKSMDEMQLKP 478

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EM E+G+  NV +Y++ IG  C+  + ++AE LL
Sbjct: 479 NDVIYNTMIHGYCKDGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLCKDGKWQEAEALL 538

Query: 884 KRMRSKG 904
           K M   G
Sbjct: 539 KEMIESG 545



 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 54/169 (31%), Positives = 92/169 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A+ L N+ +  G +P++V Y  LI G  R  +      L  +M
Sbjct: 342 TYNSLIDGFCNVGKFEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEM 401

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+   R+   +  F L+  M++ G+ P++ T+  +I   C    +
Sbjct: 402 EERGISPSKVTYTIVIDAFIRSENTERAFELYLFMQKAGLVPDVYTFGVLIHGLCTKGSM 461

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + A ++F  M E  +  N V YNT+I G+C+      A +LL+ M  KG
Sbjct: 462 KEAGKLFKSMDEMQLKPNDVIYNTMIHGYCKDGSSYRALRLLQEMCEKG 510



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/169 (31%), Positives = 84/169 (49%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ ++  +C+ G  + A  +  +    G A NVV Y  LI G  R     DA KL  +M
Sbjct: 272 TYNCVMNEYCSEGKVNKAFEMFGEMRERGVACNVVTYNILIGGLCRETKVWDAEKLVDRM 331

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
              G+ PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   +  + 
Sbjct: 332 TRAGISPNLITYNSLIDGFCNVGKFEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDS 391

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            +   +  EM ERG+S + VTY  +I  F R      A +L   M+  G
Sbjct: 392 AAVAGLVKEMEERGISPSKVTYTIVIDAFIRSENTERAFELYLFMQKAG 440



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 47/153 (30%), Positives = 72/153 (47%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  S    +Y+I+I       + + A  L    ++ G  P+V  +  LI G    G+  +
Sbjct: 404 RGISPSKVTYTIVIDAFIRSENTERAFELYLFMQKAGLVPDVYTFGVLIHGLCTKGSMKE 463

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A KLF  M  + L PN+  Y  MI+G  ++G       L +EM   G+ PN+ +YSS I 
Sbjct: 464 AGKLFKSMDEMQLKPNDVIYNTMIHGYCKDGSSYRALRLLQEMCEKGLVPNVASYSSTIG 523

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTL 832
             CK  + + A  +  EM E G+   V  YN +
Sbjct: 524 LLCKDGKWQEAEALLKEMIESGLKPTVSIYNLI 556


>gb|PPD87579.1| hypothetical protein GOBAR_DD15484 [Gossypium barbadense]
          Length = 560

 Score =  198 bits (504), Expect = 1e-55
 Identities = 108/254 (42%), Positives = 154/254 (60%), Gaps = 2/254 (0%)
 Frame = +2

Query: 149 TQPLQTPASISSI--FDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXXXXXXXXXX 322
           TQ   +P S++ I  ++ +I AH  S  P  A++Y   ++ D+                 
Sbjct: 81  TQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMV-DKNFVVGPNTFNGIMDFLI 139

Query: 323 XXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVV 502
                  A +LF  +  R    D  S+ ILI+G C  GD   +  LL++ E  G APNVV
Sbjct: 140 KFYCFEKAWTLFQESKGRV-KLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVV 198

Query: 503 MYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEM 682
           +YT+LIDGC +NG+ +    LF KM+ +GL PNE+TYTV+ING F+ G  +DG  L+E+M
Sbjct: 199 IYTTLIDGCCKNGDLEQTKLLFAKMEELGLVPNEYTYTVLINGLFKRGLENDGLELYEKM 258

Query: 683 KRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRL 862
           +R GV P+L TY+S++   C   ++  AFE+FDEM ERGV+ NVVTYN LIGG CR++RL
Sbjct: 259 QRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRL 318

Query: 863 RDAEKLLKRMRSKG 904
           R+AEKL+ +M+  G
Sbjct: 319 REAEKLVDQMKRTG 332



 Score =  103 bits (257), Expect = 5e-21
 Identities = 60/173 (34%), Positives = 92/173 (53%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++ +RTG +PN++ Y SLIDG    G  + 
Sbjct: 296 RGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEK 355

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+   R         L +EM+  G+ P+ VTY+ +I 
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + E  E AFE++  M + G+  +V TY  LI G C K  ++DA KL   M
Sbjct: 416 AFIRSENTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468



 Score =  100 bits (249), Expect = 6e-20
 Identities = 59/187 (31%), Positives = 93/187 (49%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           AR LF     +  S    +Y+ILI       D      L+ + E  G  P+ V YT +ID
Sbjct: 356 ARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVID 415

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L++ M+  GL P+ +TY V+I+G    G   D + LF  M    + P
Sbjct: 416 AFIRSENTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKP 475

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y++++   CK      A  +  EM E+ +  NV +YN+ IG  C+  + ++AE L+
Sbjct: 476 NDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEALV 535

Query: 884 KRMRSKG 904
             M   G
Sbjct: 536 TEMVESG 542



 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 52/168 (30%), Positives = 92/168 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A  L  + +  G +P++V Y  LI    R  +     KL  +M
Sbjct: 339 TYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEM 398

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ TYT++I+   R+   +  F L+  M++ G+ P++ TY  +I   C    +
Sbjct: 399 EERGIRPSKVTYTIVIDAFIRSENTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNM 458

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSK 901
           + A+++F  M E  +  N V YNT++ G+C++     A +LL+ M+ K
Sbjct: 459 KDAWKLFTSMDEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEK 506



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/169 (31%), Positives = 87/169 (51%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ +++ +C+ G    A  + ++    G A NVV Y  LI G  R     +A KL  +M
Sbjct: 269 TYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQM 328

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           K  GL PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   + ++ 
Sbjct: 329 KRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDS 388

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            +  ++  EM ERG+  + VTY  +I  F R      A +L   M+  G
Sbjct: 389 TTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSENTEKAFELYLFMQKAG 437



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 46/145 (31%), Positives = 68/145 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+I+I       + + A  L    ++ G  P+V  Y  LI G    GN  DA KLF  M
Sbjct: 409 TYTIVIDAFIRSENTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSM 468

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  M++G  + G       L +EMK   + PN+ +Y+S I   CK  + 
Sbjct: 469 DEMQLKPNDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKW 528

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  +  EM E G    V  YN +
Sbjct: 529 QEAEALVTEMVESGFKPTVSIYNLI 553


>ref|XP_007016408.2| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
           [Theobroma cacao]
          Length = 563

 Score =  198 bits (503), Expect = 1e-55
 Identities = 110/262 (41%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
 Frame = +2

Query: 125 TLIQRLIKTQPLQTPASISS--IFDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXX 298
           +L Q L  TQP   P S++   +++ +I AH  S  P  A++Y   ++ DR         
Sbjct: 78  SLFQHL--TQPNLYPNSMNQTLLYESIINAHVQSQLPDQAIYYFNQMV-DRNLVLGPNTL 134

Query: 299 XXXXXXXXXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFER 478
                          A  LF  +  R    D  S+ I+I+G C  GD   +  LL + E 
Sbjct: 135 NNILSFLIKFDSFDKAWMLFTKSKGRV-KLDVYSFGIMIKGCCEAGDLSKSFELLGQVEE 193

Query: 479 TGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDD 658
            G +PNVV+YT+LIDGC +NG+F+ A  LF +M+ +GL PNE+TYTV+ING F+ G + D
Sbjct: 194 LGLSPNVVLYTTLIDGCCKNGDFEQAKMLFCRMEELGLVPNEYTYTVLINGFFKKGLKKD 253

Query: 659 GFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIG 838
           GF L+E+M+ NGV PNL TY+ +++E C   ++  AFE+F EM ERGV+ NVVTYN LIG
Sbjct: 254 GFLLYEKMQLNGVIPNLYTYNCVMTEYCSEGKVSKAFEMFGEMRERGVACNVVTYNILIG 313

Query: 839 GFCRKRRLRDAEKLLKRMRSKG 904
           G CR+ ++ DAEKL+ +M   G
Sbjct: 314 GLCRETKVWDAEKLVDQMTRAG 335



 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 58/173 (33%), Positives = 93/173 (53%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++  R G +PN++ Y SLIDG    G  + 
Sbjct: 299 RGVACNVVTYNILIGGLCRETKVWDAEKLVDQMTRAGISPNLITYNSLIDGFCNVGKLEK 358

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+G  R        GL +EM+  G+ P+ VT++ +I 
Sbjct: 359 AMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEMEERGIRPSKVTHTIVIH 418

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + E  E A E++  M + G+  +V T+  LI G C K  +++A KL+K M
Sbjct: 419 AFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSM 471



 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 51/169 (30%), Positives = 92/169 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A+ L N+ +  G +P++V Y  LI G  R  +      L  +M
Sbjct: 342 TYNSLIDGFCNVGKLEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEM 401

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ T+T++I+   R+   +    L+  M++ G+ P++ T+  +I   C    +
Sbjct: 402 EERGIRPSKVTHTIVIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNM 461

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + A+++   M E  +  N V YNT+I G+C++     A +LL+ M  KG
Sbjct: 462 KEAWKLIKSMDEMQLKPNDVIYNTMIHGYCKEGSSYRALRLLQEMCEKG 510



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 56/187 (29%), Positives = 94/187 (50%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A  LF     +  S    +Y+ILI G     D  A   L+ + E  G  P+ V +T +I 
Sbjct: 359 AMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEMEERGIRPSKVTHTIVIH 418

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L++ M+  GL P+ +T+ V+I+G    G   + + L + M    + P
Sbjct: 419 AFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSMDEMQLKP 478

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EM E+G+  NV +Y++ IG   +  + ++AE LL
Sbjct: 479 NDVIYNTMIHGYCKEGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKWQEAEALL 538

Query: 884 KRMRSKG 904
           K +   G
Sbjct: 539 KEIVESG 545



 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 52/169 (30%), Positives = 82/169 (48%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ ++  +C+ G    A  +  +    G A NVV Y  LI G  R     DA KL  +M
Sbjct: 272 TYNCVMTEYCSEGKVSKAFEMFGEMRERGVACNVVTYNILIGGLCRETKVWDAEKLVDQM 331

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
              G+ PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   +  + 
Sbjct: 332 TRAGISPNLITYNSLIDGFCNVGKLEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDS 391

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            +   +  EM ERG+  + VT+  +I  F R      A +L   M+  G
Sbjct: 392 AAVAGLVKEMEERGIRPSKVTHTIVIHAFIRSENTERAVELYLFMQKAG 440



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 42/145 (28%), Positives = 68/145 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +++I+I       + + A+ L    ++ G  P+V  +  LI G    GN  +A KL   M
Sbjct: 412 THTIVIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSM 471

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  MI+G  + G       L +EM   G+ PN+ +YSS I    K  + 
Sbjct: 472 DEMQLKPNDVIYNTMIHGYCKEGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKW 531

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  +  E+ E G+   V  YN +
Sbjct: 532 QEAEALLKEIVESGLKPTVSIYNLI 556


>gb|EOY34026.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 563

 Score =  198 bits (503), Expect = 1e-55
 Identities = 110/262 (41%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
 Frame = +2

Query: 125 TLIQRLIKTQPLQTPASISS--IFDLLIAAHTHSGNPSAALHYARHLILDRXXXXXXXXX 298
           +L Q L  TQP   P S++   +++ +I AH  S  P  A++Y   ++ DR         
Sbjct: 78  SLFQHL--TQPNLYPNSMNQTLLYESIINAHVQSQLPDQAIYYFNQMV-DRNLVLGPNTL 134

Query: 299 XXXXXXXXXXXXXXSARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFER 478
                          A  LF  +  R    D  S+ I+I+G C  GD   +  LL + E 
Sbjct: 135 NNILSFLIKFDSFDKAWMLFTKSKGRV-KLDVYSFGIMIKGCCEAGDLSKSFELLGQVEE 193

Query: 479 TGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDD 658
            G +PNVV+YT+LIDGC +NG+F+ A  LF +M+ +GL PNE+TYTV+ING F+ G + D
Sbjct: 194 LGLSPNVVLYTTLIDGCCKNGDFEQAKMLFCRMEELGLVPNEYTYTVLINGFFKKGLKKD 253

Query: 659 GFGLFEEMKRNGVAPNLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIG 838
           GF L+E+M+ NGV PNL TY+ +++E C   ++  AFE+F EM ERGV+ NVVTYN LIG
Sbjct: 254 GFLLYEKMQLNGVIPNLYTYNCVMTEYCSEGKVSKAFEMFGEMRERGVACNVVTYNILIG 313

Query: 839 GFCRKRRLRDAEKLLKRMRSKG 904
           G CR+ ++ DAEKL+ +M   G
Sbjct: 314 GLCRETKVWDAEKLVDQMTRAG 335



 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 58/173 (33%), Positives = 93/173 (53%)
 Frame = +2

Query: 374 RSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDD 553
           R  + +  +Y+ILI G C       A  L+++  R G +PN++ Y SLIDG    G  + 
Sbjct: 299 RGVACNVVTYNILIGGLCRETKVWDAEKLVDQMTRAGISPNLITYNSLIDGFCNVGKLEK 358

Query: 554 AHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIIS 733
           A  LF ++K  G  P+  TY ++I+G  R        GL +EM+  G+ P+ VT++ +I 
Sbjct: 359 AMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEMEERGIRPSKVTHTIVIH 418

Query: 734 ERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRM 892
              + E  E A E++  M + G+  +V T+  LI G C K  +++A KL+K M
Sbjct: 419 AFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSM 471



 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 51/169 (30%), Positives = 92/169 (54%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ LI G CNVG  + A+ L N+ +  G +P++V Y  LI G  R  +      L  +M
Sbjct: 342 TYNSLIDGFCNVGKLEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEM 401

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
           +  G+ P++ T+T++I+   R+   +    L+  M++ G+ P++ T+  +I   C    +
Sbjct: 402 EERGIRPSKVTHTIVIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNM 461

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
           + A+++   M E  +  N V YNT+I G+C++     A +LL+ M  KG
Sbjct: 462 KEAWKLIKSMDEMQLKPNDVIYNTMIHGYCKEGSSYRALRLLQEMCEKG 510



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 56/187 (29%), Positives = 94/187 (50%)
 Frame = +2

Query: 344 ARSLFVLAGARSPSSDPCSYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLID 523
           A  LF     +  S    +Y+ILI G     D  A   L+ + E  G  P+ V +T +I 
Sbjct: 359 AMYLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEMEERGIRPSKVTHTIVIH 418

Query: 524 GCLRNGNFDDAHKLFVKMKAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAP 703
             +R+ N + A +L++ M+  GL P+ +T+ V+I+G    G   + + L + M    + P
Sbjct: 419 AFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSMDEMQLKP 478

Query: 704 NLVTYSSIISERCKGEELESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLL 883
           N V Y+++I   CK      A  +  EM E+G+  NV +Y++ IG   +  + ++AE LL
Sbjct: 479 NDVIYNTMIHGYCKEGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKWQEAEALL 538

Query: 884 KRMRSKG 904
           K +   G
Sbjct: 539 KEIVESG 545



 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 52/169 (30%), Positives = 82/169 (48%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +Y+ ++  +C+ G    A  +  +    G A NVV Y  LI G  R     DA KL  +M
Sbjct: 272 TYNCVMTEYCSEGKVSKAFEMFGEMRERGVACNVVTYNILIGGLCRETKVWDAEKLVDQM 331

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
              G+ PN  TY  +I+G    G+ +    LF ++K  G +P+LVTY+ +IS   +  + 
Sbjct: 332 TRAGISPNLITYNSLIDGFCNVGKLEKAMYLFNQLKTKGQSPSLVTYNILISGFSRARDS 391

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTLIGGFCRKRRLRDAEKLLKRMRSKG 904
            +   +  EM ERG+  + VT+  +I  F R      A +L   M+  G
Sbjct: 392 AAVAGLVKEMEERGIRPSKVTHTIVIHAFIRSENTERAVELYLFMQKAG 440



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 41/145 (28%), Positives = 67/145 (46%)
 Frame = +2

Query: 398 SYSILIRGHCNVGDCDAALNLLNKFERTGGAPNVVMYTSLIDGCLRNGNFDDAHKLFVKM 577
           +++I+I       + + A+ L    ++ G  P+V  +  LI G    GN  +A KL   M
Sbjct: 412 THTIVIHAFIRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSM 471

Query: 578 KAIGLDPNEFTYTVMINGCFRNGRRDDGFGLFEEMKRNGVAPNLVTYSSIISERCKGEEL 757
             + L PN+  Y  MI+G  + G       L +EM   G+ PN+ +YSS I    K  + 
Sbjct: 472 DEMQLKPNDVIYNTMIHGYCKEGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKW 531

Query: 758 ESAFEVFDEMGERGVSRNVVTYNTL 832
           + A  +  E+ E G+   V  Y  +
Sbjct: 532 QEAEALLKEIVESGLKPTVSIYKLI 556