BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00025767
         (753 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   369   e-117
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   322   e-105
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   337   e-103
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   315   e-102
gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagu...   307   e-102
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen...   313   e-101
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   322   e-100
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   329   e-100
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   329   e-100
gb|ASR75372.1| retrotransposon protein [Oryza nivara]                 324   e-100
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   322   e-100
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   325   3e-99
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     322   1e-98
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     321   2e-98
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   320   6e-97
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     317   7e-97
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   320   8e-97
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic...   305   1e-96
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   317   1e-96
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   317   1e-96

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  369 bits (948), Expect = e-117
 Identities = 183/254 (72%), Positives = 213/254 (83%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TW+L  LPKGKKAIGCKWVYAKK   +    VRYKARLVAKG+AQ+EGIDYNEVFSPVVK
Sbjct: 610  TWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGIDYNEVFSPVVK 669

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR+LLALVAQ D+EL Q+DVKTAFLHGDL+EEI+M QP+GFKVAG E+  CKL+KSL
Sbjct: 670  HSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAGKENMFCKLEKSL 729

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD FM  +KYTRS YD CVY  +L    F+YLLLYVDDMLIASK K 
Sbjct: 730  YGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKE 789

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I++LK QL+ EFEMKDLGEAKKILGMEI RDR+  R+CLTQK YL+++L+++ +  ++K
Sbjct: 790  EIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLKRVLKRFGISDESK 849

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLA HFKLSA
Sbjct: 850  PVSTPLASHFKLSA 863


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  322 bits (825), Expect = e-105
 Identities = 160/254 (62%), Positives = 205/254 (80%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1   TWELVKLPKGKKAIGCKWVYAKK-GAPN-HPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
           TW L KLPKGK+ + CKW+Y KK G P     R KARLV KGF Q+EGID+NE+FSPVV+
Sbjct: 13  TWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVR 72

Query: 175 HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
           H+SIRILLA VA +DLELEQLDVKTAFLHG+L+EEI+M+QP+GF V   E  VC+LKKSL
Sbjct: 73  HTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSL 132

Query: 355 YGLKQSPRQWYKRFDTFMT-EKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
           YGLKQ+PRQWYK+FD+FM  + Y+RS YD C+Y+ +     F+YLLLYVDDMLIAS+ K+
Sbjct: 133 YGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKS 192

Query: 532 AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
            I +LKAQL++EFEMK+LG AKKILGMEI RDR+  ++ L+Q+ Y+++LL ++N+ ++ K
Sbjct: 193 LISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNM-NNCK 251

Query: 712 AVNVPLAPHFKLSA 753
            V+ PLA HFKLS+
Sbjct: 252 PVSTPLAAHFKLSS 265


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  337 bits (864), Expect = e-103
 Identities = 168/254 (66%), Positives = 206/254 (81%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKK-GAPN-HPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TW+LV LP+GK+ I CKW++ +K G P     RYKAR V +GF Q+EGID+NEVFSPVV+
Sbjct: 502  TWDLVMLPEGKRVISCKWIFKRKEGIPGVENARYKARFVVRGFDQQEGIDFNEVFSPVVR 561

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR+LLALVA YDLELEQLDVKTAFLHG+L+EEI++ QP+GF V G E+ VC+LKKSL
Sbjct: 562  HSSIRVLLALVALYDLELEQLDVKTAFLHGNLEEEIYIQQPEGFVVPGKENHVCRLKKSL 621

Query: 355  YGLKQSPRQWYKRFDTFMT-EKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FMT   Y+RS YD CVY+ +L     VYLLLYVDDMLIA++ KT
Sbjct: 622  YGLKQSPRQWYKRFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLLLYVDDMLIAARDKT 681

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             +D+LK QL+SEF+MKDLG AKKILGMEI RDR+  ++ L+QK Y+ K+L ++ +  D K
Sbjct: 682  LVDKLKVQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQKKYVMKMLDRFGM-RDCK 740

Query: 712  AVNVPLAPHFKLSA 753
            AVN PLA HFKLS+
Sbjct: 741  AVNTPLAAHFKLSS 754


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  315 bits (807), Expect = e-102
 Identities = 159/254 (62%), Positives = 199/254 (78%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1   TWELVKLPKGKKAIGCKWVYAKK-GAPN-HPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
           TWELV LP+G K +GCKWV  +K G P   P R+KARLVAKGF+Q+EGIDY+EVFSPVVK
Sbjct: 224 TWELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGIDYHEVFSPVVK 283

Query: 175 HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
           H +IR+LLA+V+  D++LEQL+VK AFLHG+L+E+++M+QP GF   G ++ VC LKKSL
Sbjct: 284 HKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKKNHVCLLKKSL 343

Query: 355 YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
           YGLKQSPRQWYKRFD FM +  + R+ +D CVY  +L    ++YLLLYVDDMLIA+K KT
Sbjct: 344 YGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAAKSKT 403

Query: 532 AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
            ID LKA LSSEFEMKDLG AKKILGMEI RDR    + ++QK Y++KLLQ + +  ++K
Sbjct: 404 DIDALKAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQM-ENSK 462

Query: 712 AVNVPLAPHFKLSA 753
            V+ PLA HFKL A
Sbjct: 463 PVSTPLATHFKLDA 476


>gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagus officinalis]
          Length = 299

 Score =  307 bits (786), Expect = e-102
 Identities = 156/245 (63%), Positives = 197/245 (80%), Gaps = 3/245 (1%)
 Frame = +1

Query: 28  GKKAIGCKWVYAKK-GAPN-HPVRYKARLVAKGFAQREGIDYNEVFSPVVKHSSIRILLA 201
           G+K +GCKWV+ KK GAP+   VRYKARLVAK ++Q EG+D+NEVFSPV+KH+SIR+L A
Sbjct: 2   GQKIVGCKWVFKKKEGAPDTDSVRYKARLVAKDYSQTEGVDFNEVFSPVIKHTSIRVLFA 61

Query: 202 LVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSLYGLKQSPRQ 381
           +VA ++LELEQLDVKTAFLHG+LDE+IFM+QP+GF V G E  VC+LKKSLYGLKQSPRQ
Sbjct: 62  MVAHFNLELEQLDVKTAFLHGELDEQIFMHQPEGFIVEGKEDHVCRLKKSLYGLKQSPRQ 121

Query: 382 WYKRFDTFMTEK-YTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKTAIDELKAQL 558
           WY RFDTFM E  Y+R+ YD CVY+ +L    FVYLLLYVDDMLIA+K  + I+ELK+QL
Sbjct: 122 WYLRFDTFMFEHGYSRNKYDSCVYHKKLNDGFFVYLLLYVDDMLIAAKDMSEINELKSQL 181

Query: 559 SSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTKAVNVPLAPH 738
             EFEMK+LG  KKILGMEI R+R +  + L+Q+ Y++K+L+++ +  D K V   LA H
Sbjct: 182 KHEFEMKNLGATKKILGMEIHRNRREGSLFLSQEKYIKKVLERFGM-LDAKPVKTLLAAH 240

Query: 739 FKLSA 753
           F+LSA
Sbjct: 241 FRLSA 245


>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 502

 Score =  313 bits (802), Expect = e-101
 Identities = 150/253 (59%), Positives = 202/253 (79%), Gaps = 3/253 (1%)
 Frame = +1

Query: 4   WELVKLPKGKKAIGCKWVYAKKGAPNHP--VRYKARLVAKGFAQREGIDYNEVFSPVVKH 177
           WELV  PK +K +GCKWV+ KK   +    ++YKARLVAKG++Q+EG+DY+E+FSPVVKH
Sbjct: 14  WELVPKPKERKLVGCKWVFRKKEGVHDADAIKYKARLVAKGYSQKEGVDYDEIFSPVVKH 73

Query: 178 SSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSLY 357
           +SIR+LL++ AQYD+E+EQ+DVKTAFLHGDL+E+I+M+QP+GF   G E  VC+L+KSLY
Sbjct: 74  TSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKEDLVCRLRKSLY 133

Query: 358 GLKQSPRQWYKRFDTFMTE-KYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKTA 534
           GLKQSPRQWYKRFDT+M +  YTR LYD CVYY   E  E + LLLYVDDMLIA K  + 
Sbjct: 134 GLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYYHVFEDGEIILLLLYVDDMLIACKDMSK 193

Query: 535 IDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTKA 714
           I+ELK +L +EF+MKDLG A+ ILG+EI RDR+  ++ L+Q+ Y+ ++L+++N+    K 
Sbjct: 194 IEELKKKLGAEFDMKDLGAAQNILGIEIRRDRKAGKIWLSQEKYILRVLERFNM-DGAKV 252

Query: 715 VNVPLAPHFKLSA 753
           V++PLA H++LSA
Sbjct: 253 VSIPLAAHYQLSA 265


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  322 bits (826), Expect = e-100
 Identities = 160/254 (62%), Positives = 208/254 (81%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELVKLPK KK+I CKW++ +K   +P+   RYKARLVAKG++Q   ID+N+VFSP+VK
Sbjct: 589  TWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVK 648

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR LL++VA +D ELEQ+DVKTAFLHG+L+E+I+M QP+GF V G E+ VC+LKKSL
Sbjct: 649  HSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSL 708

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM ++K+ RS YD CV Y+++     +YLLLYVDDMLIA+K K+
Sbjct: 709  YGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCV-YLKVVDGSAIYLLLYVDDMLIAAKDKS 767

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I++LKAQLSSEFEMKDLG AKKILGMEI R+R   ++ L+QK Y++K+L+++N+  D K
Sbjct: 768  EIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNM-HDAK 826

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLA HF+ S+
Sbjct: 827  PVSTPLAAHFRSSS 840


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  329 bits (844), Expect = e-100
 Identities = 167/254 (65%), Positives = 201/254 (79%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKGA--PNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELVK P  +K +GCKWV+ KK         R+KARLVAKGF Q+EGIDYNEVFSPVVK
Sbjct: 1332 TWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVK 1391

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR+LLA+VA+ DLELEQLDVKTAFLHG+L+E I+M QP+GF V G E  VC LKKSL
Sbjct: 1392 HSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSL 1451

Query: 355  YGLKQSPRQWYKRFDTFMTEK-YTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM +  YTR  YD CVY+ +L     +YLLLYVDDMLIASK  +
Sbjct: 1452 YGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMS 1511

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I++LK+QLS EFEMKDLG AKKILGM+I RDR+  ++ ++QK Y++K+LQ++ +    K
Sbjct: 1512 EINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGM-DKAK 1570

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLAPHFKLSA
Sbjct: 1571 TVSTPLAPHFKLSA 1584


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  329 bits (844), Expect = e-100
 Identities = 167/254 (65%), Positives = 201/254 (79%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKGA--PNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELVK P  +K +GCKWV+ KK         R+KARLVAKGF Q+EGIDYNEVFSPVVK
Sbjct: 1353 TWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVK 1412

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR+LLA+VA+ DLELEQLDVKTAFLHG+L+E I+M QP+GF V G E  VC LKKSL
Sbjct: 1413 HSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSL 1472

Query: 355  YGLKQSPRQWYKRFDTFMTEK-YTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM +  YTR  YD CVY+ +L     +YLLLYVDDMLIASK  +
Sbjct: 1473 YGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMS 1532

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I++LK+QLS EFEMKDLG AKKILGM+I RDR+  ++ ++QK Y++K+LQ++ +    K
Sbjct: 1533 EINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGM-DKAK 1591

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLAPHFKLSA
Sbjct: 1592 TVSTPLAPHFKLSA 1605


>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
          Length = 1170

 Score =  324 bits (831), Expect = e-100
 Identities = 164/255 (64%), Positives = 203/255 (79%), Gaps = 4/255 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG---APNHPVRYKARLVAKGFAQREGIDYNEVFSPVV 171
            TWELV LPK KK + CKW++ +KG   +P+ P R+KARLVAKGF+Q  G+DYN+VFSPVV
Sbjct: 756  TWELVHLPKQKKPVRCKWIFKEKGGFISPSEPPRFKARLVAKGFSQIAGVDYNDVFSPVV 815

Query: 172  KHSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKS 351
            KHSSIR   ++VA +DLELEQLDVKTAFLHG+L+EEI+M+QP+GF V G E  VCKLK+S
Sbjct: 816  KHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRS 875

Query: 352  LYGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCK 528
            LYGLKQSPRQWYKRFD+FM +  + RS +D CVY   +  S  +YLLLYVDDMLIA+K K
Sbjct: 876  LYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSP-IYLLLYVDDMLIAAKSK 934

Query: 529  TAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDT 708
              I  LK QLSSEF+MKDLG AKKILGMEI RDR    + L+Q++Y++K+LQ++N+  D 
Sbjct: 935  EQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNM-HDA 993

Query: 709  KAVNVPLAPHFKLSA 753
            K V+ P+APHFKLSA
Sbjct: 994  KPVSTPIAPHFKLSA 1008


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  322 bits (825), Expect = e-100
 Identities = 160/254 (62%), Positives = 205/254 (80%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKK-GAPN-HPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TW L KLPKGK+ + CKW+Y KK G P     R KARLV KGF Q+EGID+NE+FSPVV+
Sbjct: 542  TWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVR 601

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            H+SIRILLA VA +DLELEQLDVKTAFLHG+L+EEI+M+QP+GF V   E  VC+LKKSL
Sbjct: 602  HTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSL 661

Query: 355  YGLKQSPRQWYKRFDTFMT-EKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQ+PRQWYK+FD+FM  + Y+RS YD C+Y+ +     F+YLLLYVDDMLIAS+ K+
Sbjct: 662  YGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKS 721

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I +LKAQL++EFEMK+LG AKKILGMEI RDR+  ++ L+Q+ Y+++LL ++N+ ++ K
Sbjct: 722  LISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNM-NNCK 780

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLA HFKLS+
Sbjct: 781  PVSTPLAAHFKLSS 794


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  325 bits (832), Expect = 3e-99
 Identities = 160/254 (62%), Positives = 205/254 (80%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TW+LV  P G+K I CKWV+ KK   +P   V+YKAR+VA+GF QREG+DYNE+FSPVV+
Sbjct: 822  TWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVR 881

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            H+SIR+LLA+VA  +LELEQLDVKTAFLHG+L+EEI+M QP GF+V G E+ VCKLKKSL
Sbjct: 882  HTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSL 941

Query: 355  YGLKQSPRQWYKRFDTFMTE-KYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD++M +  YTRS YD CVYY RL    F+YL+LYVDDMLIA+K K 
Sbjct: 942  YGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKY 1001

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I +LK  LS+EFEMKDLG A+KILGMEI+RDRE+ ++ L+Q++Y+QK+L ++ + S +K
Sbjct: 1002 DIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGM-SSSK 1060

Query: 712  AVNVPLAPHFKLSA 753
             ++ P A +  L+A
Sbjct: 1061 PIDTPSAANIHLTA 1074


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  322 bits (825), Expect = 1e-98
 Identities = 161/254 (63%), Positives = 207/254 (81%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELVKLPK KK I CKW++ +K   +P+   RYKARLVAKG++Q  GID+N+VFSPVVK
Sbjct: 819  TWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVK 878

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR LL +VA +D ELEQ++VKTAFLHG+L+E+I+M QP+GF V G E+ VC+LKKSL
Sbjct: 879  HSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSL 938

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM ++K+  S YD CV Y+++     +YLLLYVDDMLIA+K K+
Sbjct: 939  YGLKQSPRQWYKRFDSFMLSQKFRISNYDSCV-YLKVVDGSVIYLLLYVDDMLIAAKDKS 997

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I++LKAQLSSEFEMKDLG AKKILGMEI R+R   ++ L+QK Y++K+L+++N+  D K
Sbjct: 998  EIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNM-HDAK 1056

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLA HF+LS+
Sbjct: 1057 PVSTPLAAHFRLSS 1070


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  321 bits (823), Expect = 2e-98
 Identities = 162/254 (63%), Positives = 208/254 (81%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELVKLPK KK I CKW++ +K   +P+   RYKARLVAKG++Q  GID+N+VFSPV+K
Sbjct: 726  TWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLK 785

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR LL++VA +D ELEQ+DVKTAFLHG+L+E+I+M QP+GF V G E+ V +LKKSL
Sbjct: 786  HSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSL 845

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM ++K+ RS YD CVY   ++ S  +YLLLYVDDMLIA+K K+
Sbjct: 846  YGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYLKVVDGSS-IYLLLYVDDMLIAAKDKS 904

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I++LKAQLSSEFEMKDLG AKKILGMEI R+R   ++ L+QK Y++K+L+++N+  D K
Sbjct: 905  EIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNM-HDAK 963

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLA HF+LS+
Sbjct: 964  PVSTPLAAHFRLSS 977


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  320 bits (821), Expect = 6e-97
 Identities = 165/253 (65%), Positives = 200/253 (79%), Gaps = 3/253 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKK-GAPN-HPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TW LVK PKG + +GCKWVY KK G P     R+KARLVAKGF+Q+EGIDYNE+FSPVVK
Sbjct: 1409 TWVLVKRPKGMRTVGCKWVYKKKEGIPEVEAARFKARLVAKGFSQKEGIDYNEIFSPVVK 1468

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR+LLALVAQ+DLEL+QLDVKTAFLHGDL+E I+M+QP+GF   G E  VC+LKKSL
Sbjct: 1469 HSSIRVLLALVAQFDLELQQLDVKTAFLHGDLEETIYMDQPEGFLAEGKEDHVCQLKKSL 1528

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD FM T  ++RS +D CVY+ ++  +  +YLLLYVDDMLIA+   T
Sbjct: 1529 YGLKQSPRQWYKRFDAFMTTHGFSRSAFDSCVYHKKMSGNSMIYLLLYVDDMLIAANNIT 1588

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I+ LK  LS EF+MKDLG AKKILGMEI   RE   V L+QK Y++K+L+++N+   +K
Sbjct: 1589 EINILKKLLSKEFDMKDLGVAKKILGMEI--SRENGVVHLSQKRYIRKVLERFNMDM-SK 1645

Query: 712  AVNVPLAPHFKLS 750
             V+ PLA HFKLS
Sbjct: 1646 PVSTPLASHFKLS 1658


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  317 bits (813), Expect = 7e-97
 Identities = 160/254 (62%), Positives = 205/254 (80%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            +WEL KLPK KK I CKW++ +K   +P+   RYKARLVAKG++Q  GID+N+VFSPVVK
Sbjct: 756  SWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVK 815

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR LL++VA +D ELEQ+DVKTAFLHG+L+E+I+M QP+GF V G E+ VC+LKKSL
Sbjct: 816  HSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSL 875

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM ++K+ RS YD CV Y+++     +YLLLYVDDMLIA+K K+
Sbjct: 876  YGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCV-YLKVVDGSAIYLLLYVDDMLIAAKDKS 934

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I +LKAQLSSEFEMKDLG AKKILGMEI R+R   ++ L+QK Y++K+L ++N+  D K
Sbjct: 935  EIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNM-HDAK 993

Query: 712  AVNVPLAPHFKLSA 753
             V+  LA HF+LS+
Sbjct: 994  LVSTLLAAHFRLSS 1007


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  320 bits (820), Expect = 8e-97
 Identities = 161/254 (63%), Positives = 206/254 (81%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELVKLPK KK I CKW++ +K   + +   RYKARL+AKG++Q  GID+N+VFSPVVK
Sbjct: 1054 TWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVK 1113

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR LL++VA +D ELEQ+DVKTAFLHG+L+E+I+M QP+GF V G E+ VC+LKKSL
Sbjct: 1114 HSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSL 1173

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM ++K+ RS YD CV Y+++     +YLLLYVDDMLIA+K K+
Sbjct: 1174 YGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCV-YLKVVDGSAIYLLLYVDDMLIAAKDKS 1232

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I +LKAQLSSEFEMKDLG AKKILGMEI R R   ++ L+QK Y++K+L+++N+  D K
Sbjct: 1233 EIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNM-HDAK 1291

Query: 712  AVNVPLAPHFKLSA 753
             V+ PLA HF+LS+
Sbjct: 1292 PVSTPLAAHFRLSS 1305


>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
          Length = 624

 Score =  305 bits (780), Expect = 1e-96
 Identities = 151/251 (60%), Positives = 198/251 (78%), Gaps = 3/251 (1%)
 Frame = +1

Query: 10  LVKLPKGKKAIGCKWVYAKK-GAPN-HPVRYKARLVAKGFAQREGIDYNEVFSPVVKHSS 183
           L +LPKGK+ + CKW+Y KK G P     R KARLV KGF Q+EGID+NE+FSPVV+H+S
Sbjct: 199 LTELPKGKRPLRCKWIYKKKEGIPGVENPRCKARLVVKGFNQKEGIDFNEIFSPVVRHTS 258

Query: 184 IRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSLYGL 363
           IR+LLA VA +DLELEQLDVKTAFLHG+L+EEI+M Q  GF   G E  VC+LKKSLYGL
Sbjct: 259 IRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYMEQSDGFIAPGKEHLVCRLKKSLYGL 318

Query: 364 KQSPRQWYKRFDTFMT-EKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKTAID 540
           KQ+PRQWYKRF +FM  + Y +S YD C+Y+   ++  F+YLLLYVDDMLIAS+ K+ I 
Sbjct: 319 KQAPRQWYKRFHSFMIGQNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDMLIASRDKSLIK 378

Query: 541 ELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTKAVN 720
           +LK +LS+EF+MK+LG AKKILGMEI RDR+  ++ L+Q+ Y++++L ++N+ ++ K V+
Sbjct: 379 KLKTELSNEFDMKELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRFNM-NNCKPVS 437

Query: 721 VPLAPHFKLSA 753
            PLA HFKLS+
Sbjct: 438 TPLAAHFKLSS 448


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  317 bits (812), Expect = 1e-96
 Identities = 161/254 (63%), Positives = 201/254 (79%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELV LPK KK + CKW++ +K   +P+ P R+KARLVAKGF+Q  G+DYN+VFSPVVK
Sbjct: 837  TWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVK 896

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR   ++VA +DLELEQLDVKTAFLHG+L+EEI+M+QP+GF V G E  VCKLK+SL
Sbjct: 897  HSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSL 956

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM +  + RS +D CVY   +  S  +YLLLYVDD+LIA+K K 
Sbjct: 957  YGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSP-IYLLLYVDDILIAAKSKE 1015

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I  LK QLSSEF+MKDLG AKKILGMEI RD+    + L+Q++Y++K+LQ +N+  D K
Sbjct: 1016 QITTLKKQLSSEFDMKDLGAAKKILGMEITRDKNSGLLFLSQQSYIKKVLQCFNM-HDAK 1074

Query: 712  AVNVPLAPHFKLSA 753
             V+ P+APHFKLSA
Sbjct: 1075 PVSTPIAPHFKLSA 1088


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
            Group]
 gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1322

 Score =  317 bits (813), Expect = 1e-96
 Identities = 160/254 (62%), Positives = 199/254 (78%), Gaps = 3/254 (1%)
 Frame = +1

Query: 1    TWELVKLPKGKKAIGCKWVYAKKG--APNHPVRYKARLVAKGFAQREGIDYNEVFSPVVK 174
            TWELV LPK KK + CKW++ +K   +P+ P R+K RLVAKGF+Q  G+DYN+VFSPVVK
Sbjct: 837  TWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVK 896

Query: 175  HSSIRILLALVAQYDLELEQLDVKTAFLHGDLDEEIFMNQPQGFKVAGAESKVCKLKKSL 354
            HSSIR   ++V  +DLELEQLDVKT FLHG+L+EEI+M+QP+GF V G E  VCKLK+SL
Sbjct: 897  HSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSL 956

Query: 355  YGLKQSPRQWYKRFDTFM-TEKYTRSLYDPCVYYMRLESSEFVYLLLYVDDMLIASKCKT 531
            YGLKQSPRQWYKRFD+FM +  + RS +D CVY   +  S  +YLLLYVDDMLIA+K K 
Sbjct: 957  YGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSP-IYLLLYVDDMLIAAKSKE 1015

Query: 532  AIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKERVCLTQKAYLQKLLQKYNVGSDTK 711
             I  LK QLSSEF+MKDLG AKKILGMEI RDR    + L+Q++Y++K+LQ++N+  D K
Sbjct: 1016 QITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNM-HDAK 1074

Query: 712  AVNVPLAPHFKLSA 753
             V+ P+APHFKLSA
Sbjct: 1075 PVSTPIAPHFKLSA 1088