BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00025647
         (704 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010905257.1| PREDICTED: H/ACA ribonucleoprotein complex n...    60   1e-06
ref|XP_020276575.1| H/ACA ribonucleoprotein complex non-core sub...    59   2e-06
gb|ONK65668.1| uncharacterized protein A4U43_C07F39450 [Asparagu...    59   2e-06

>ref|XP_010905257.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like [Elaeis guineensis]
          Length = 775

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 19/139 (13%)
 Frame = +1

Query: 13  PSAEYQHDDPTRPIYD-LDSYFLDHLSDFDPIKEWLVDPDPNPMPD-----SNILNDSDT 174
           PS  +  +  + P +D  DS+  D   DFDP+KEWLVDPD   MP+        L+ SD 
Sbjct: 9   PSGAHSPEPSSPPGFDAFDSFLYDPCPDFDPVKEWLVDPDQFLMPEVEGNGPTYLDASDD 68

Query: 175 PEPINA------------ELGHEDPTLEPSIDERMEKVSLVESKMDSGGDVGKNREAVEA 318
           P+ +              E   ++  L+ SIDE+M KVSL E   D G       ++ E 
Sbjct: 69  PKTVEGFGESCSGSRTMIESRLKEEFLKTSIDEKMGKVSLAE---DGGHHHHHGEDSCEG 125

Query: 319 ITR-EVGCGEAKNDGASED 372
           +       G   N G S D
Sbjct: 126 VVEASANVGGVTNVGGSND 144


>ref|XP_020276575.1| H/ACA ribonucleoprotein complex non-core subunit NAF1-like
           [Asparagus officinalis]
          Length = 611

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/116 (40%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
 Frame = +1

Query: 64  DSYFLDHLSDFDPIKEWLVDP-DPNPMPDS--NILNDSDTPEPINAELGHEDPTLEPSID 234
           DSYF+D    FDPIKEWLVDP D +PM +S  NIL D                 LEPSID
Sbjct: 19  DSYFVD----FDPIKEWLVDPADFSPMYNSLDNILKDH---------------ILEPSID 59

Query: 235 ERMEKVSLVESKMDS-GGDVGKNREAVEAIT-----REVGCGEAKNDGASEDFSVS 384
            +MEKVSLVE   D    ++    + ++  T      E   GE ++D +S+  S S
Sbjct: 60  VKMEKVSLVEVNNDGVSEEICPTTDPIKVATDCDLKEESSAGEEEDDSSSDGSSSS 115


>gb|ONK65668.1| uncharacterized protein A4U43_C07F39450 [Asparagus officinalis]
          Length = 624

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/116 (40%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
 Frame = +1

Query: 64  DSYFLDHLSDFDPIKEWLVDP-DPNPMPDS--NILNDSDTPEPINAELGHEDPTLEPSID 234
           DSYF+D    FDPIKEWLVDP D +PM +S  NIL D                 LEPSID
Sbjct: 19  DSYFVD----FDPIKEWLVDPADFSPMYNSLDNILKDH---------------ILEPSID 59

Query: 235 ERMEKVSLVESKMDS-GGDVGKNREAVEAIT-----REVGCGEAKNDGASEDFSVS 384
            +MEKVSLVE   D    ++    + ++  T      E   GE ++D +S+  S S
Sbjct: 60  VKMEKVSLVEVNNDGVSEEICPTTDPIKVATDCDLKEESSAGEEEDDSSSDGSSSS 115