BLASTX nr result

ID: Ophiopogon23_contig00024971 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00024971
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008344385.1| PREDICTED: transducin beta-like protein 2 [M...    57   9e-07
gb|KQK86084.1| hypothetical protein SETIT_035701mg [Setaria ital...    57   1e-06

>ref|XP_008344385.1| PREDICTED: transducin beta-like protein 2 [Malus domestica]
          Length = 385

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = +2

Query: 26  KSAVASLCFSQNSEQIMTASRDDSLRIWNINGML--YGVACI 145
           KSAV  LCF+ NSEQ++TAS+D S+RIWNINGM   Y V CI
Sbjct: 298 KSAVTWLCFTPNSEQMITASKDGSIRIWNINGMYDWYSVLCI 339


>gb|KQK86084.1| hypothetical protein SETIT_035701mg [Setaria italica]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   VQLLLHVLKSAVASLCFSQNSEQIMTASRDDSLRIWNINGM 124
           +QL+ H  KSAV SLCF+ NSEQI+TAS+D S+R+WNING+
Sbjct: 298 MQLMGH--KSAVTSLCFAPNSEQIITASKDGSIRVWNINGI 336


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