BLASTX nr result

ID: Ophiopogon23_contig00024820 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00024820
         (642 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK65145.1| uncharacterized protein A4U43_C07F34150 [Asparagu...    59   9e-07
ref|XP_020272692.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like, pa...    59   9e-07

>gb|ONK65145.1| uncharacterized protein A4U43_C07F34150 [Asparagus officinalis]
          Length = 357

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -1

Query: 576 NASRKSARQGPRGVQVEKNEPRRPYAKASLVDRRQASNTRRNGVQRKNSVEGKSHGRGNS 397
           + SR+   +G RGV+VE  EPRR     SLV   +  N RR+  QRKN  EG+S+GRGN+
Sbjct: 287 DGSRERVMEGRRGVRVENIEPRR-----SLVKESRGMNGRRHEGQRKNDGEGRSYGRGNN 341

Query: 396 -PRGKHRSQTRTRVST 352
             +GK R   R  VST
Sbjct: 342 FAQGKQRVNLRNMVST 357


>ref|XP_020272692.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like, partial [Asparagus
           officinalis]
          Length = 359

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -1

Query: 576 NASRKSARQGPRGVQVEKNEPRRPYAKASLVDRRQASNTRRNGVQRKNSVEGKSHGRGNS 397
           + SR+   +G RGV+VE  EPRR     SLV   +  N RR+  QRKN  EG+S+GRGN+
Sbjct: 289 DGSRERVMEGRRGVRVENIEPRR-----SLVKESRGMNGRRHEGQRKNDGEGRSYGRGNN 343

Query: 396 -PRGKHRSQTRTRVST 352
             +GK R   R  VST
Sbjct: 344 FAQGKQRVNLRNMVST 359


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