BLASTX nr result

ID: Ophiopogon23_contig00024697 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00024697
         (526 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253520.1| glycerophosphodiester phosphodiesterase GDPD...    40   7e-06

>ref|XP_020253520.1| glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like
           [Asparagus officinalis]
 gb|ONK77854.1| uncharacterized protein A4U43_C02F11430 [Asparagus officinalis]
          Length = 368

 Score = 40.4 bits (93), Expect(2) = 7e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
 Frame = +3

Query: 459 VEIGRWGSK-PGKFLVIGHRG 518
           VEIGRWGSK P KFLVIGHRG
Sbjct: 33  VEIGRWGSKPPAKFLVIGHRG 53



 Score = 37.0 bits (84), Expect(2) = 7e-06
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +2

Query: 263 MVLKVVRVSNVPNLDRVPNLSVSTSR 340
           M LK V VS+VP+LD VP++S++TSR
Sbjct: 2   MALKAVHVSDVPSLDHVPDVSIATSR 27


Top