BLASTX nr result
ID: Ophiopogon23_contig00024517
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00024517
(686 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020256373.1| mediator of RNA polymerase II transcription ... 99 5e-22
ref|XP_020256372.1| mediator of RNA polymerase II transcription ... 99 7e-22
ref|XP_017700136.1| PREDICTED: mediator of RNA polymerase II tra... 98 1e-21
ref|XP_008800293.1| PREDICTED: mediator of RNA polymerase II tra... 98 2e-21
ref|XP_019702908.1| PREDICTED: mediator of RNA polymerase II tra... 96 2e-20
ref|XP_010909088.1| PREDICTED: mediator of RNA polymerase II tra... 93 2e-19
gb|PKA50862.1| Mediator of RNA polymerase II transcription subun... 91 1e-18
ref|XP_018679922.1| PREDICTED: mediator of RNA polymerase II tra... 90 1e-18
ref|XP_018679921.1| PREDICTED: mediator of RNA polymerase II tra... 90 2e-18
ref|XP_009397400.1| PREDICTED: mediator of RNA polymerase II tra... 90 3e-18
ref|XP_020103598.1| mediator of RNA polymerase II transcription ... 88 1e-17
ref|XP_020103597.1| mediator of RNA polymerase II transcription ... 88 1e-17
ref|XP_020103596.1| mediator of RNA polymerase II transcription ... 88 1e-17
ref|XP_020103595.1| mediator of RNA polymerase II transcription ... 88 1e-17
ref|XP_020103593.1| mediator of RNA polymerase II transcription ... 88 1e-17
ref|XP_020103592.1| mediator of RNA polymerase II transcription ... 88 2e-17
dbj|BAS85438.1| Os03g0641700, partial [Oryza sativa Japonica Group] 86 2e-17
ref|XP_015691185.1| PREDICTED: mediator of RNA polymerase II tra... 86 8e-17
ref|XP_006650338.1| PREDICTED: mediator of RNA polymerase II tra... 86 8e-17
ref|XP_015633118.1| PREDICTED: mediator of RNA polymerase II tra... 86 8e-17
>ref|XP_020256373.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X2 [Asparagus officinalis]
Length = 193
Score = 99.0 bits (245), Expect = 5e-22
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQTAPYLRE TAHIQPFDLD+LGQAFQL++ AP+DLPSAEKG PTI
Sbjct: 62 GMELDQLFQTAPYLRETTAHIQPFDLDSLGQAFQLRDAAPIDLPSAEKGIPTI 114
>ref|XP_020256372.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X1 [Asparagus officinalis]
gb|ONK74557.1| uncharacterized protein A4U43_C03F7640 [Asparagus officinalis]
Length = 205
Score = 99.0 bits (245), Expect = 7e-22
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQTAPYLRE TAHIQPFDLD+LGQAFQL++ AP+DLPSAEKG PTI
Sbjct: 62 GMELDQLFQTAPYLRETTAHIQPFDLDSLGQAFQLRDAAPIDLPSAEKGIPTI 114
>ref|XP_017700136.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X2 [Phoenix dactylifera]
Length = 200
Score = 98.2 bits (243), Expect = 1e-21
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ APYLRE TAHI+PFDLD LGQAFQL+ETAP+DLPSAEKG PTI
Sbjct: 63 GMELDQLFQNAPYLRETTAHIRPFDLDILGQAFQLRETAPIDLPSAEKGVPTI 115
>ref|XP_008800293.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Phoenix dactylifera]
Length = 212
Score = 98.2 bits (243), Expect = 2e-21
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ APYLRE TAHI+PFDLD LGQAFQL+ETAP+DLPSAEKG PTI
Sbjct: 63 GMELDQLFQNAPYLRETTAHIRPFDLDILGQAFQLRETAPIDLPSAEKGVPTI 115
>ref|XP_019702908.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
[Elaeis guineensis]
Length = 212
Score = 95.5 bits (236), Expect = 2e-20
Identities = 45/53 (84%), Positives = 50/53 (94%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ+APYLRE TA+I+PFDLD LGQAFQL+ETAP+DLPSAEKG PTI
Sbjct: 63 GMELDQLFQSAPYLRETTANIRPFDLDILGQAFQLRETAPIDLPSAEKGIPTI 115
>ref|XP_010909088.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Elaeis guineensis]
Length = 212
Score = 92.8 bits (229), Expect = 2e-19
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ AP LRE TAHIQPFDLD LG+AFQL+ETAP+DLPS EKG PTI
Sbjct: 63 GMELDQLFQNAPNLRETTAHIQPFDLDILGKAFQLRETAPIDLPSVEKGIPTI 115
>gb|PKA50862.1| Mediator of RNA polymerase II transcription subunit 19a [Apostasia
shenzhenica]
Length = 208
Score = 90.5 bits (223), Expect = 1e-18
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ APY RE TA+IQ FDL ALGQAFQL+ET P+DLPSAEKG PTI
Sbjct: 63 GMELDQLFQNAPYFRETTAYIQTFDLQALGQAFQLRETTPIDLPSAEKGIPTI 115
>ref|XP_018679922.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 183
Score = 89.7 bits (221), Expect = 1e-18
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLF APYLRE TAHIQPFDL+ LGQAF L++TAP+DLPSA KG PTI
Sbjct: 63 GMELDQLFHNAPYLRESTAHIQPFDLELLGQAFLLRDTAPIDLPSAAKGTPTI 115
>ref|XP_018679921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 206
Score = 89.7 bits (221), Expect = 2e-18
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLF APYLRE TAHIQPFDL+ LGQAF L++TAP+DLPSA KG PTI
Sbjct: 63 GMELDQLFHNAPYLRESTAHIQPFDLELLGQAFLLRDTAPIDLPSAAKGTPTI 115
>ref|XP_009397400.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 227
Score = 89.7 bits (221), Expect = 3e-18
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLF APYLRE TAHIQPFDL+ LGQAF L++TAP+DLPSA KG PTI
Sbjct: 63 GMELDQLFHNAPYLRESTAHIQPFDLELLGQAFLLRDTAPIDLPSAAKGTPTI 115
>ref|XP_020103598.1| mediator of RNA polymerase II transcription subunit 19a isoform X6
[Ananas comosus]
Length = 205
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ PYLRE A IQ FDLD LGQA QL+ETAP+DLPSAEKG PT+
Sbjct: 63 GMELDQLFQNTPYLRETAARIQQFDLDTLGQALQLRETAPIDLPSAEKGVPTV 115
>ref|XP_020103597.1| mediator of RNA polymerase II transcription subunit 19a isoform X5
[Ananas comosus]
Length = 207
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ PYLRE A IQ FDLD LGQA QL+ETAP+DLPSAEKG PT+
Sbjct: 63 GMELDQLFQNTPYLRETAARIQQFDLDTLGQALQLRETAPIDLPSAEKGVPTV 115
>ref|XP_020103596.1| mediator of RNA polymerase II transcription subunit 19a isoform X4
[Ananas comosus]
Length = 208
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ PYLRE A IQ FDLD LGQA QL+ETAP+DLPSAEKG PT+
Sbjct: 63 GMELDQLFQNTPYLRETAARIQQFDLDTLGQALQLRETAPIDLPSAEKGVPTV 115
>ref|XP_020103595.1| mediator of RNA polymerase II transcription subunit 19a isoform X3
[Ananas comosus]
gb|OAY74958.1| Mediator of RNA polymerase II transcription subunit 19a [Ananas
comosus]
Length = 211
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ PYLRE A IQ FDLD LGQA QL+ETAP+DLPSAEKG PT+
Sbjct: 63 GMELDQLFQNTPYLRETAARIQQFDLDTLGQALQLRETAPIDLPSAEKGVPTV 115
>ref|XP_020103593.1| mediator of RNA polymerase II transcription subunit 19a isoform X2
[Ananas comosus]
Length = 214
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ PYLRE A IQ FDLD LGQA QL+ETAP+DLPSAEKG PT+
Sbjct: 63 GMELDQLFQNTPYLRETAARIQQFDLDTLGQALQLRETAPIDLPSAEKGVPTV 115
>ref|XP_020103592.1| mediator of RNA polymerase II transcription subunit 19a isoform X1
[Ananas comosus]
Length = 219
Score = 87.8 bits (216), Expect = 2e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ PYLRE A IQ FDLD LGQA QL+ETAP+DLPSAEKG PT+
Sbjct: 63 GMELDQLFQNTPYLRETAARIQQFDLDTLGQALQLRETAPIDLPSAEKGVPTV 115
>dbj|BAS85438.1| Os03g0641700, partial [Oryza sativa Japonica Group]
Length = 159
Score = 85.9 bits (211), Expect = 2e-17
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ A YLRE T++IQPFD++ LGQAFQL+ETAP+DLPSAEKG PTI
Sbjct: 68 GMELDQLFQDA-YLREKTSYIQPFDMETLGQAFQLRETAPIDLPSAEKGTPTI 119
>ref|XP_015691185.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Oryza brachyantha]
ref|XP_015691186.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Oryza brachyantha]
ref|XP_015691187.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Oryza brachyantha]
Length = 218
Score = 85.9 bits (211), Expect = 8e-17
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ A YLRE T++IQPFD++ LGQAFQL+ETAP+DLPSAEKG PTI
Sbjct: 68 GMELDQLFQDA-YLREKTSYIQPFDMETLGQAFQLRETAPIDLPSAEKGTPTI 119
>ref|XP_006650338.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X2 [Oryza brachyantha]
Length = 220
Score = 85.9 bits (211), Expect = 8e-17
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ A YLRE T++IQPFD++ LGQAFQL+ETAP+DLPSAEKG PTI
Sbjct: 68 GMELDQLFQDA-YLREKTSYIQPFDMETLGQAFQLRETAPIDLPSAEKGTPTI 119
>ref|XP_015633118.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
[Oryza sativa Japonica Group]
ref|XP_015633119.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
[Oryza sativa Japonica Group]
ref|XP_015633120.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
[Oryza sativa Japonica Group]
gb|AAT85274.1| expressed protein [Oryza sativa Japonica Group]
gb|ABF97838.1| expressed protein [Oryza sativa Japonica Group]
dbj|BAF12662.1| Os03g0641700 [Oryza sativa Japonica Group]
dbj|BAG92130.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAS85437.1| Os03g0641700 [Oryza sativa Japonica Group]
Length = 220
Score = 85.9 bits (211), Expect = 8e-17
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 1 GMELDQLFQTAPYLREITAHIQPFDLDALGQAFQLQETAPVDLPSAEKGAPTI 159
GMELDQLFQ A YLRE T++IQPFD++ LGQAFQL+ETAP+DLPSAEKG PTI
Sbjct: 68 GMELDQLFQDA-YLREKTSYIQPFDMETLGQAFQLRETAPIDLPSAEKGTPTI 119