BLASTX nr result
ID: Ophiopogon23_contig00023926
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00023926
(1376 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo... 78 1e-21
gb|ESR55658.1| hypothetical protein CICLE_v10023471mg, partial [... 62 1e-18
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 66 6e-18
gb|AJE29370.1| putative gag protein [Coffea canephora] 58 6e-16
gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis] 65 9e-16
gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinen... 65 1e-15
gb|PKA62818.1| Retrovirus-related Pol polyprotein from transposo... 80 5e-14
ref|XP_022139673.1| uncharacterized protein LOC111010521 [Momord... 56 6e-14
gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium bar... 64 8e-14
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 63 7e-13
gb|PON68556.1| hypothetical protein PanWU01x14_095270 [Parasponi... 52 3e-12
gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposo... 75 5e-12
gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposo... 76 6e-12
gb|KYP65226.1| Retrovirus-related Pol polyprotein from transposo... 49 6e-12
gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis] 54 5e-11
gb|PKU80393.1| Retrovirus-related Pol polyprotein from transposo... 71 3e-10
dbj|GAU39928.1| hypothetical protein TSUD_275280 [Trifolium subt... 51 1e-09
ref|XP_006369212.1| hypothetical protein POPTR_0001s19040g, part... 59 1e-09
gb|PNT55386.1| hypothetical protein POPTR_001G189600v3 [Populus ... 59 1e-09
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera] 64 1e-09
>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 365
Score = 77.8 bits (190), Expect(2) = 1e-21
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +3
Query: 195 MKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHIVTTMLYGKETL- 371
M EG +LEH+N F+K+I++L +INV P+SYDH+VTT+LYGK+TL
Sbjct: 1 MSEGANLLEHMNVFSKMISQLRSINVKLEEENEALLLLSSLPKSYDHLVTTILYGKDTLK 60
Query: 372 ILEVTSTLLSNEIKKGQSKLRRMHRTWWLREGRRKGKF 485
+ EV +TLLSNE++ QS + GR K KF
Sbjct: 61 VEEVNATLLSNEVRNKQSTGESLTVKTSQDRGRSKNKF 98
Score = 55.8 bits (133), Expect(2) = 1e-21
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Frame = +1
Query: 505 HFCHKKDHFMKNY--KHWQEWLKKKGH-AAVADVVMSGIDDEV*MTFIDENKFSR*KLDS 675
++C K+ H+ ++ K Q+ KK G A+VA + D E TF + LDS
Sbjct: 116 YYCKKEGHWKRDCPKKSKQQQQKKSGEEASVASRLEK--DSETLCTFSCMDSSDSWILDS 173
Query: 676 RFW*YGSCMFP*GYI*LLCCEEGIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYVP 855
Y C F + + G + M + S C+ + GT+KIK DG++R L +++VP
Sbjct: 174 DCS-YHMCPFRDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTEVRHVP 232
Query: 856 EVRYNLLSIRVLD-EGCRIQVQQGIITISQ 942
++R L+S+ LD GC GII + +
Sbjct: 233 DLRKGLISLGTLDASGCTFIGSDGIIKVKK 262
>gb|ESR55658.1| hypothetical protein CICLE_v10023471mg, partial [Citrus clementina]
Length = 185
Score = 62.0 bits (149), Expect(2) = 1e-18
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SMSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLE-TYITKSISNKLYLK 174
S+SDE+W ELD + AS I+LCLA V+ NV N +A +L KLE Y TKSISN+LYLK
Sbjct: 27 SISDEDWEELDDRAASAIRLCLAKNVLANVGNIPTAKELWEKLEKLYQTKSISNRLYLK 85
Score = 61.2 bits (147), Expect(2) = 1e-18
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 159 QIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHI 338
++ L++Q + L M EGT + +H++ N I++EL AI V P SY H+
Sbjct: 81 RLYLKEQFHTLRMAEGTKISDHLSVLNGIVSELEAIGVKIEDDDKALRLLWSLPTSYKHM 140
Query: 339 VTTMLYGKETLIL-EVTSTLLSNE 407
+ T++YGKE + L EVTSTLLS E
Sbjct: 141 LPTLMYGKEIVDLEEVTSTLLSEE 164
>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 65.9 bits (159), Expect(2) = 6e-18
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = +3
Query: 123 KVGDVYNKEHL-QQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXX 299
K+ +Y K L ++ L+K LY + ++EG + +H++ FNKII +L +++
Sbjct: 86 KLESLYLKRSLANRLYLKKSLYTIHLEEGKDLKKHMDEFNKIILDLKNVDIKITDEDCAI 145
Query: 300 XXXXXXPESYDHIVTTMLYGKETLIL-EVTSTLLSNEI-KKGQSKL 431
P SY+H V TMLYGKETL + EV S L S E+ KK ++K+
Sbjct: 146 LMLSSLPRSYEHFVDTMLYGKETLTMAEVKSALNSKELHKKNETKM 191
Score = 55.1 bits (131), Expect(2) = 6e-18
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Frame = +1
Query: 511 CHKKDHFMKNYKHWQ----EWLKKKGHAAVADVVMSGIDDEV*MTFIDENKFSR*KLDSR 678
CHK+ HF K+ + E K G AAV V G + + NK +DS
Sbjct: 232 CHKEGHFKKDCPDRRARNPERRKDPGDAAV---VSDGYESAEVLVVSRTNKQDCWVMDSG 288
Query: 679 FW*YGSCMFP*GYI*LLCCEEGIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYVPE 858
+ C + L+ E G + + + C+V+ G+V +K DG VR + ++YVP+
Sbjct: 289 CS-FHMCPIKSWFQNLVEEESGHVLLGNNRECKVMGIGSVLLKMHDGCVRTITEVRYVPD 347
Query: 859 VRYNLLSIRVLD--------EGCRIQVQQGIITI---SQEN 948
+R NLLSI +LD EG ++V +G +T+ SQ+N
Sbjct: 348 LRRNLLSIGMLDSKGFNVKIEGGTMKVIKGSLTVMRGSQDN 388
>gb|AJE29370.1| putative gag protein [Coffea canephora]
Length = 433
Score = 58.2 bits (139), Expect(2) = 6e-16
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 168 LEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHIVTT 347
L++Q Y L M EG ++++H+N FN I+++L + V +SY+ +VTT
Sbjct: 106 LKRQFYALKMVEGGSLMDHMNTFNGILDQLQKVGVDIEEENKALLLLTPVSDSYESVVTT 165
Query: 348 MLYGKETLILE-VTSTLLSNE 407
+LYGK+TL E V S+LL +E
Sbjct: 166 LLYGKDTLEFENVQSSLLDHE 186
Score = 56.2 bits (134), Expect(2) = 6e-16
Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 SMSDENWAELDLKTASTIQLCLANEVMYNVMNE-DSAPDL*LKLE-TYITKSISNKLYLK 174
SM+D+ + ELD + ASTI+L +A+ ++ NV++E DSA DL KLE Y+ KS+SNKL+LK
Sbjct: 48 SMNDDEFEELDARCASTIRLYVADNIINNVIDEKDSAADLWKKLEKLYLAKSLSNKLHLK 107
Score = 54.3 bits (129), Expect(2) = 2e-08
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 742 GIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYVPEVRYNLLSIRVLD-EGCRIQVQ 918
G + + DGSTC+V G VKIK +G +R+L + YVP++R NL+S+ LD EG
Sbjct: 309 GFMCLGDGSTCQVKGVGVVKIKMLNGEIRSLGGVAYVPKLRRNLISLNQLDSEGYHFSAA 368
Query: 919 QGIITIS 939
G++ I+
Sbjct: 369 SGVLKIT 375
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 668 WILDSGSMVHVCSHKDIFDSFVARK 742
WILDSG + HVCS D FD+ +K
Sbjct: 283 WILDSGCVSHVCSRLDYFDTLQRKK 307
>gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis]
Length = 1371
Score = 65.5 bits (158), Expect(2) = 9e-16
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 168 LEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHIVTT 347
L++ LY+L M EG +++EH+N F ++++L ++V P+SY++I+TT
Sbjct: 296 LKRDLYKLKMGEGASLMEHMNVFRGLVDQLAKVDVKIEEEDQALLLLTSLPDSYENIITT 355
Query: 348 MLYGKETLIL-EVTSTLLSNEIKK 416
+LYGK+TL + EV STLL++E ++
Sbjct: 356 ILYGKDTLKMEEVESTLLNHEKRR 379
Score = 48.1 bits (113), Expect(2) = 9e-16
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLE-TYITKSISNKLYLKNN 180
MSDE+W EL+ + STI+L +A+ ++ NV N DSA L K+E ++ K + KL LK +
Sbjct: 240 MSDEDWEELESRCVSTIRLYIADNIINNVNNVDSATQLWEKMEKLHLGKGLQTKLNLKRD 299
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 739 EGIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYVPEVRYNLLSIRVLD-EGCRIQV 915
+G + DG+ V+ GTVKIK DG VR L + YVP R NL+S+ LD +GCR+
Sbjct: 502 KGFVTWGDGTRRCVMGVGTVKIKMFDGAVRTLGDVVYVPRFRRNLVSLSQLDSKGCRVSS 561
Query: 916 QQGIITISQ 942
G + IS+
Sbjct: 562 AGGAMKISR 570
Score = 40.0 bits (92), Expect(2) = 1e-09
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 662 KNWILDSGSMVHVCSHKDIFDSFVARKGLSRW 757
++WILD+GS H+CS ++ FD+F KG W
Sbjct: 476 RDWILDTGSSHHLCSRREYFDTFQEVKGFVTW 507
>gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 460
Score = 65.5 bits (158), Expect(2) = 1e-15
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 168 LEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHIVTT 347
L++ LY+L M EG +++EH+N F ++++L ++V P+SY++I+TT
Sbjct: 106 LKRDLYKLKMGEGASLMEHMNVFRGLVDQLAKVDVKIEEEDQALLLLTSLPDSYENIITT 165
Query: 348 MLYGKETLIL-EVTSTLLSNEIKK 416
+LYGK+TL + EV STLL++E ++
Sbjct: 166 ILYGKDTLKMEEVESTLLNHEKRR 189
Score = 48.1 bits (113), Expect(2) = 1e-15
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLE-TYITKSISNKLYLKNN 180
MSDE+W EL+ + STI+L +A+ ++ NV N DSA L K+E ++ K + KL LK +
Sbjct: 50 MSDEDWEELESRCVSTIRLYIADNIINNVNNVDSATQLWEKMEKLHLGKGLQTKLNLKRD 109
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 739 EGIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYVPEVRYNLLSIRVLD-EGCRIQV 915
+G + DG+ V+ GTVKIK DG VR L + YVP R NL+S+ LD +GCR+
Sbjct: 312 KGFVTWGDGTRRCVMGVGTVKIKMFDGAVRTLGDVVYVPRFRRNLVSLSQLDSKGCRVSS 371
Query: 916 QQGIITISQ 942
G + IS+
Sbjct: 372 AGGAMKISR 380
Score = 40.0 bits (92), Expect(2) = 1e-09
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 662 KNWILDSGSMVHVCSHKDIFDSFVARKGLSRW 757
++WILD+GS H+CS ++ FD+F KG W
Sbjct: 286 RDWILDTGSSHHLCSRREYFDTFQEVKGFVTW 317
>gb|PKA62818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 163
Score = 80.1 bits (196), Expect = 5e-14
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 NKEHLQQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXP 320
+K ++ +++QLY L M EG +L+H+N F K+I++L +I+V P
Sbjct: 10 SKSLTNKLYMKRQLYSLRMSEGVNLLKHMNVFCKMISQLRSIDVKLEDEDEALLLLSSLP 69
Query: 321 ESYDHIVTTMLYGKETLILE-VTSTLLSNEIKKGQSKLRRMHRTWWLREGRRKGKF 485
+SYDH+VTT+LY K+TL +E V +TLLSNE++ QS + GR K KF
Sbjct: 70 KSYDHLVTTILYDKDTLKVEKVNATLLSNEVRNKQSTCESLTVKISQDRGRSKNKF 125
>ref|XP_022139673.1| uncharacterized protein LOC111010521 [Momordica charantia]
Length = 564
Score = 55.8 bits (133), Expect(2) = 6e-14
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +3
Query: 159 QIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHI 338
++ L++Q + L M+EG + +H++ N II EL AI V P SY+H+
Sbjct: 422 RLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALRLILSLPXSYEHM 481
Query: 339 VTTMLYGKETL-ILEVTSTLLSNEIKKGQSKLRRMH 443
++YGK+TL EVTS LLS E ++ +S+ R H
Sbjct: 482 KPILMYGKDTLNFAEVTSKLLSEE-RRLKSEGRTSH 516
Score = 51.6 bits (122), Expect(2) = 6e-14
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SMSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLK 174
SMS E+W E+DL+ AS I+ LA ++ NV +A +L KLE Y K ISN+LYLK
Sbjct: 368 SMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNRLYLK 426
>gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium barbadense]
Length = 718
Score = 64.3 bits (155), Expect(2) = 8e-14
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Frame = +1
Query: 508 FCHKKDHFMKNYKHWQEWLKKKGHAAVADVVMSGIDDEV*MTFIDENKFSR*KLDSRFW* 687
+C K H +Y + K+ + DVV + + DE F+ + KL S +
Sbjct: 481 YCKKLGHVKADYYKLRN--KRAAESNEEDVVGANLVDEGGDDFLLVSTSDNSKLTSEWIL 538
Query: 688 YGSC---MFP*G--YI*LLCCEEGIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYV 852
C M+P + E G++ M + S+ ++I GTVKI+ DG ++ L ++YV
Sbjct: 539 DSGCSFHMYPNREWFSTYSSVEGGVVHMGNDSSSKIIGIGTVKIRIHDGTIKTLSDVRYV 598
Query: 853 PEVRYNLLSIRVLD-EGCRIQVQQGIITISQ 942
P++R NL+S+ +LD +GCRI ++ I +S+
Sbjct: 599 PDLRKNLISLSILDLKGCRINIESSNIKVSR 629
Score = 42.7 bits (99), Expect(2) = 8e-14
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 144 KEHLQQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPE 323
K ++VL+++L+ M EG + +H++ F ++N+L + V P
Sbjct: 362 KSLANRLVLKQRLFTFRMNEGELLKDHISQFITLLNDLKNVEVHIDDEDQAMLLLCSLPS 421
Query: 324 SYDHIVTTMLYGKETLILE-VTSTLLSNE 407
SY T++YGK+ L E V LLS +
Sbjct: 422 SYKSFKETLIYGKDKLSFEDVKGHLLSRD 450
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 57.0 bits (136), Expect(2) = 7e-13
Identities = 40/158 (25%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Frame = +1
Query: 487 RPSKVRHFCHKKDHFMKN---YKHWQEWLKKKGHAAVADVVMSGIDDEV*MTFIDENKFS 657
+ +K +C K H + + K QE +K + A A V + D +V M + +K S
Sbjct: 225 KSNKTCRYCKKFGHDISDCFILKKKQERQEKGKNPAEAANVETDSDGDV-MISVSSDKRS 283
Query: 658 R*K--LDSRFW*YGSCMFP*GYI*LLCCEEGIIKMVDGSTCRVIDTGTVKIKGKDGMVRA 831
+ + LDS + C + + L + G++ M + + C++ GT++IK DG ++
Sbjct: 284 KTEWILDSGCT-FHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKT 342
Query: 832 LETIQYVPEVRYNLLSIRVLDE-GCRIQVQQGIITISQ 942
L ++++P+++ NL+S+ L+ GC+ + G++ +S+
Sbjct: 343 LSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSK 380
Score = 47.0 bits (110), Expect(2) = 7e-13
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +3
Query: 114 LVIKVGDVYNKEHL-QQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXX 290
L +K+ +Y + L ++ L+++LY + M EGT + H+N FN II +L I +
Sbjct: 85 LWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDED 144
Query: 291 XXXXXXXXXPESYDHIVTTMLY-GKETLILE-VTSTLLSNE 407
P +Y H MLY +TL E V S LLS E
Sbjct: 145 KAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVKSNLLSKE 185
Score = 63.2 bits (152), Expect = 8e-07
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SMSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLK 174
+M+DE W ELD K S IQLCL+ EV+ V NE +A L LKLE+ Y+TKS++NKL LK
Sbjct: 47 NMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLK 105
>gb|PON68556.1| hypothetical protein PanWU01x14_095270 [Parasponia andersonii]
Length = 127
Score = 52.4 bits (124), Expect(2) = 3e-12
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKL-ETYITKSISNKLYLK 174
MSDE W ++D + +TI++CLA V+ NV+ +A DL K E Y K +SN++YLK
Sbjct: 1 MSDEEWDDMDERAVTTIRMCLAKNVLANVLGIITAKDLWRKFEELYQAKGVSNRVYLK 58
Score = 49.7 bits (117), Expect(2) = 3e-12
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +3
Query: 159 QIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHI 338
++ L++Q + L M EGT + +H+ N I++EL AI V P SY+H+
Sbjct: 54 RVYLKEQFHTLYMNEGTKISDHLCVLNSIVSELEAIGVKIEDEDKALRFIWSLPPSYEHM 113
Query: 339 VTTMLYGKETLI 374
+++GKET++
Sbjct: 114 KPILVHGKETIV 125
>gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 198
Score = 75.5 bits (184), Expect = 5e-12
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +3
Query: 141 NKEHLQQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXP 320
+K ++ +++QLY L M E +LEH+N F+KII++ +I+V P
Sbjct: 93 SKSLTNKLYMKRQLYSLRMSEEADLLEHMNIFSKIISQFHSIDVKLEEEDKTLLLLSLLP 152
Query: 321 ESYDHIVTTMLYGKETLILE-VTSTLLSNEIKKGQS 425
+SYDH+VTT+LY K+TL +E V +TLLSNE++ QS
Sbjct: 153 KSYDHLVTTILYDKDTLKVEKVNATLLSNEVQNKQS 188
Score = 60.1 bits (144), Expect = 9e-07
Identities = 30/58 (51%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLK 174
+++E EL LK +STIQLCLA+EV+YN+ + +++ DL KLE Y++KS++NKLY+K
Sbjct: 46 ITNEECEELYLKASSTIQLCLADEVLYNIFDVETSVDLWRKLEKFYMSKSLTNKLYMK 103
>gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 249
Score = 76.3 bits (186), Expect = 6e-12
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +3
Query: 141 NKEHLQQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXP 320
+K ++ +++QLY L M EG +LEH+N F+K+I++ +I V P
Sbjct: 148 SKSLTNKLYMKRQLYNLRMSEGANLLEHMNVFSKMISQFHSIEVKLQEKDVILLFLSLLP 207
Query: 321 ESYDHIVTTMLYGKETL-ILEVTSTLLSNEIKKGQS 425
+SY+H++ T+LYGK+TL + EV +TLLSNE++ QS
Sbjct: 208 KSYNHLIITILYGKDTLKVEEVNATLLSNEVRNKQS 243
Score = 72.8 bits (177), Expect = 9e-11
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLKNN 180
M+DE W ELDLK STIQLCLA+EV+YN+ + +++ DL KLE Y++KS++NKLY+K
Sbjct: 101 MTDEEWKELDLKALSTIQLCLADEVLYNISDVETSVDLWRKLEKFYMSKSLTNKLYMKRQ 160
Query: 181 CMNYA*KKG 207
N +G
Sbjct: 161 LYNLRMSEG 169
>gb|KYP65226.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 689
Score = 49.3 bits (116), Expect(3) = 6e-12
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 12/168 (7%)
Frame = +3
Query: 144 KEHLQQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPE 323
K + ++ L++ LY M E V E ++ FNK+I +L I+V P
Sbjct: 72 KSLVNRLYLKQSLYSFKMNEDKPVGEQLDQFNKLILDLENIDVTIDDEDQALLLLCSLPR 131
Query: 324 SYDHIVTTMLYGKETL-ILEVTSTLLSNEIKKGQSKLRRMHRTWWLREGRRKGKF----- 485
+Y H TML+G++++ I EV + + S E+ + + K ++ +G+ K+
Sbjct: 132 AYSHFKETMLFGRDSVSIDEVQAAINSKELNERKEKKPTVNGEGLTAKGKTSKKYSKPDK 191
Query: 486 ------KAV*GTSLLSQERSLHEKLQALARVVEEERTCCGGRRSHERY 611
K G R H K + R V ER GG + +Y
Sbjct: 192 KKPKPEKQKDGGESTFTIRCYHCKKEGHTRKVCPERLANGGNKEKGKY 239
Score = 47.4 bits (111), Expect(3) = 6e-12
Identities = 20/67 (29%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 739 EGIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYVPEVRYNLLSIRVLD-EGCRIQV 915
+G++ + D C++ G+++ + DG+ R L ++YVP+++ NL+S+ D +G Q
Sbjct: 293 DGLVLLGDNKPCKIKGIGSIRFRFHDGIERVLADVRYVPDLKRNLISLGEFDKKGYVFQG 352
Query: 916 QQGIITI 936
Q+GI+ +
Sbjct: 353 QEGILNV 359
Score = 23.5 bits (49), Expect(3) = 6e-12
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 668 WILDSGSMVHVCSHKDIFDSF 730
WI+DSG H+ + F++F
Sbjct: 268 WIMDSGCSWHMTPRRSWFENF 288
>gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1212
Score = 53.5 bits (127), Expect(3) = 5e-11
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Frame = +3
Query: 132 DVYNKEHLQQIVLEKQ-LYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXX 308
D Y K+ L + +KQ LY M E T + +H++ FN+II +L + V
Sbjct: 90 DKYMKKSLTNRLFQKQHLYTFKMAENTPIKDHLDSFNRIILDLGGVGVKIEDEDLALILL 149
Query: 309 XXXPESYDHIVTTMLYGKETLIL-EVTSTLLSNEIKKGQSKLRRMHRTWWLREGRRKGKF 485
P S+ + TMLYG++T+ L +V LLS E++ S + + GR K K
Sbjct: 150 CSLPRSFQNFRDTMLYGRDTIALKDVKYALLSKELQNKVSADVDGEASLIVTRGRNKEKS 209
Query: 486 KAV*GTSLLSQERSLHEKLQALARVVE 566
+ S+ R+ +Q + +VE
Sbjct: 210 SGIARFRSRSKSRATSAIVQEGSSLVE 236
Score = 40.0 bits (92), Expect(3) = 5e-11
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = +1
Query: 742 GIIKMVDGSTCRVIDTGTVKIKGKDGMVRALETIQYVPEVRYNLLSIRVLD--------E 897
G + + D +T V +G+V+IK DG +R + VPE+R NL+S+ LD E
Sbjct: 283 GSVMLGDETTLSVKGSGSVQIKTHDGTIRTFDA-WLVPELRKNLISLGTLDKQGYKYSGE 341
Query: 898 GCRIQVQQGIITI 936
+I+V +G +TI
Sbjct: 342 NGQIKVSKGSMTI 354
Score = 23.5 bits (49), Expect(3) = 5e-11
Identities = 6/21 (28%), Positives = 15/21 (71%)
Frame = +2
Query: 668 WILDSGSMVHVCSHKDIFDSF 730
W++D+G+ H+ +++F +F
Sbjct: 258 WVVDTGASYHMTFSRNLFTTF 278
>gb|PKU80393.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 257
Score = 71.2 bits (173), Expect = 3e-10
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Frame = +3
Query: 123 KVGDVYNKEHL-QQIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXX 299
K+ +Y K+ L +++L+KQLY L M+E +++H+N FNK+I +L ++V
Sbjct: 86 KIESIYMKKSLTNRLLLKKQLYMLQMEENQELIKHLNDFNKLILDLRNVDVKIDEEDQGI 145
Query: 300 XXXXXXPESYDHIVTTMLYGKETLIL-EVTSTLLSNEIKKGQSKLRRMHRTWWLREGRRK 476
P++Y++IV TMLYGK+TL L EV S L+S ++++ + + + GR +
Sbjct: 146 ILLSSLPKTYENIVDTMLYGKQTLTLTEVKSVLMSKDVRRKSDQKEDKNGNILIARGRSE 205
Query: 477 GK 482
+
Sbjct: 206 SR 207
>dbj|GAU39928.1| hypothetical protein TSUD_275280 [Trifolium subterraneum]
Length = 580
Score = 50.8 bits (120), Expect(2) = 1e-09
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 165 VLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHIVT 344
+L++QLY M E +V+E + FNKII++L INV P+S +++
Sbjct: 101 LLKQQLYFFRMVENKSVVEQLTKFNKIIDDLANINVKIEDEDQAFHLLCALPKSLENLKD 160
Query: 345 TMLYGKETLIL--EVTSTLLSNEIKK 416
+LYGKE I EV S L++ E+ K
Sbjct: 161 ALLYGKEGTITLDEVQSALITKELTK 186
Score = 42.4 bits (98), Expect(2) = 1e-09
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SMSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLK 174
++S+E E+D K S I LCL+++V+ V E +A ++ KL++ Y+TKS+++K LK
Sbjct: 45 NLSNEEKTEMDKKAHSIIILCLSDKVLREVAKEKTAVEMWTKLDSLYMTKSLAHKQLLK 103
>ref|XP_006369212.1| hypothetical protein POPTR_0001s19040g, partial [Populus
trichocarpa]
Length = 190
Score = 59.3 bits (142), Expect(2) = 1e-09
Identities = 29/59 (49%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLKN 177
+++ +W EL+ + +TI+LCL ++VMY+VMNE+S + KLE+ YI+ S+SNKLYLK+
Sbjct: 22 LNNIDWQELETRIVATIRLCLYDDVMYHVMNEESPVTVWAKLESRYISLSLSNKLYLKH 80
Score = 33.5 bits (75), Expect(2) = 1e-09
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 159 QIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHI 338
++ L+ +L+ L M EGT + H FN L+ +N +Y+++
Sbjct: 75 KLYLKHKLFGLKMSEGTDLNRH---FNNEDEALMLLNSLPFSL------------TYENL 119
Query: 339 VTTMLYGKETLIL-EVTSTLLSNEIKKGQS 425
V T ++ KETLIL ++ S LLS ++K S
Sbjct: 120 VITPMWEKETLILKKIISALLSFNLRKKTS 149
>gb|PNT55386.1| hypothetical protein POPTR_001G189600v3 [Populus trichocarpa]
Length = 170
Score = 59.3 bits (142), Expect(2) = 1e-09
Identities = 29/59 (49%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLKN 177
+++ +W EL+ + +TI+LCL ++VMY+VMNE+S + KLE+ YI+ S+SNKLYLK+
Sbjct: 2 LNNIDWQELETRIVATIRLCLYDDVMYHVMNEESPVTVWAKLESRYISLSLSNKLYLKH 60
Score = 33.5 bits (75), Expect(2) = 1e-09
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 159 QIVLEKQLYELCMKEGTTVLEHVNFFNKIINELLAINVXXXXXXXXXXXXXXXPESYDHI 338
++ L+ +L+ L M EGT + H FN L+ +N +Y+++
Sbjct: 55 KLYLKHKLFGLKMSEGTDLNRH---FNNEDEALMLLNSLPFSL------------TYENL 99
Query: 339 VTTMLYGKETLIL-EVTSTLLSNEIKKGQS 425
V T ++ KETLIL ++ S LLS ++K S
Sbjct: 100 VITPMWEKETLILKKIISALLSFNLRKKTS 129
>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 63.9 bits (154), Expect(2) = 1e-09
Identities = 30/58 (51%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 MSDENWAELDLKTASTIQLCLANEVMYNVMNEDSAPDL*LKLET-YITKSISNKLYLK 174
M++ +W +L++K A+TI+LCLA++VMY+VM+E+S + LKLE+ Y++K ++NKLYLK
Sbjct: 48 MNNMDWKDLEVKVAATIRLCLADDVMYHVMDEESPTAIWLKLESQYMSKLLTNKLYLK 105
Score = 28.9 bits (63), Expect(2) = 1e-09
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 159 QIVLEKQLYELCMKEGTTVLEHVNFFN 239
++ L+++LY L M EG+ + +H+N FN
Sbjct: 101 KLYLKQKLYGLKMAEGSDLSQHINVFN 127