BLASTX nr result
ID: Ophiopogon23_contig00023617
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00023617
(548 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020270225.1| DNA repair helicase XPB1 isoform X3 [Asparag... 139 4e-35
ref|XP_020270223.1| DNA repair helicase XPB1 isoform X2 [Asparag... 139 6e-35
ref|XP_020270221.1| DNA repair helicase XPB1 isoform X1 [Asparag... 139 6e-35
ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea... 124 2e-33
ref|XP_008788735.1| PREDICTED: DNA repair helicase XPB1 isoform ... 132 2e-32
ref|XP_016500687.1| PREDICTED: DNA repair helicase XPB1-like [Ni... 126 9e-32
gb|KJB20625.1| hypothetical protein B456_003G156900 [Gossypium r... 127 3e-31
gb|OWM85302.1| hypothetical protein CDL15_Pgr028089 [Punica gran... 128 6e-31
ref|XP_018623264.1| PREDICTED: DNA repair helicase XPB1 [Nicotia... 126 8e-31
gb|KJB20626.1| hypothetical protein B456_003G156900 [Gossypium r... 127 9e-31
gb|KJB20624.1| hypothetical protein B456_003G156900 [Gossypium r... 127 9e-31
ref|XP_010934928.1| PREDICTED: DNA repair helicase XPB1 isoform ... 127 9e-31
ref|XP_012471789.1| PREDICTED: DNA repair helicase XPB1-like iso... 127 9e-31
ref|XP_010934926.1| PREDICTED: DNA repair helicase XPB1 isoform ... 127 9e-31
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1 [Vitis v... 127 9e-31
ref|XP_012471788.1| PREDICTED: DNA repair helicase XPB1-like iso... 127 9e-31
emb|CBI34367.3| unnamed protein product, partial [Vitis vinifera] 127 9e-31
ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr... 127 1e-30
ref|XP_023881498.1| general transcription and DNA repair factor ... 127 2e-30
ref|XP_024173476.1| general transcription and DNA repair factor ... 127 2e-30
>ref|XP_020270225.1| DNA repair helicase XPB1 isoform X3 [Asparagus officinalis]
Length = 667
Score = 139 bits (351), Expect = 4e-35
Identities = 75/100 (75%), Positives = 77/100 (77%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSGS+LSF TL EQLDLLSKVLSAGDDVVGLEQLEEDADDIALQK
Sbjct: 567 PPPDSGSELSFHTLQEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSALS 626
Query: 181 XXXXXVYMEYNT--GKKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEYNT GKKGHG KSKPKDPAKRHHLFRKR+
Sbjct: 627 GASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHHLFRKRY 664
>ref|XP_020270223.1| DNA repair helicase XPB1 isoform X2 [Asparagus officinalis]
ref|XP_020270224.1| DNA repair helicase XPB1 isoform X2 [Asparagus officinalis]
Length = 765
Score = 139 bits (351), Expect = 6e-35
Identities = 75/100 (75%), Positives = 77/100 (77%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSGS+LSF TL EQLDLLSKVLSAGDDVVGLEQLEEDADDIALQK
Sbjct: 665 PPPDSGSELSFHTLQEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSALS 724
Query: 181 XXXXXVYMEYNT--GKKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEYNT GKKGHG KSKPKDPAKRHHLFRKR+
Sbjct: 725 GASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHHLFRKRY 762
>ref|XP_020270221.1| DNA repair helicase XPB1 isoform X1 [Asparagus officinalis]
ref|XP_020270222.1| DNA repair helicase XPB1 isoform X1 [Asparagus officinalis]
gb|ONK66043.1| uncharacterized protein A4U43_C06F3580 [Asparagus officinalis]
Length = 766
Score = 139 bits (351), Expect = 6e-35
Identities = 75/100 (75%), Positives = 77/100 (77%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSGS+LSF TL EQLDLLSKVLSAGDDVVGLEQLEEDADDIALQK
Sbjct: 666 PPPDSGSELSFHTLQEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSALS 725
Query: 181 XXXXXVYMEYNT--GKKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEYNT GKKGHG KSKPKDPAKRHHLFRKR+
Sbjct: 726 GASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHHLFRKRY 763
>ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea var. sylvestris]
Length = 124
Score = 124 bits (312), Expect = 2e-33
Identities = 66/99 (66%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG+ L++ LDEQL LL KVLSAGDD VGLEQLEED D IALQK
Sbjct: 25 PPPDSGATLNYSRLDEQLALLGKVLSAGDDAVGLEQLEEDTDGIALQKARRSAGSMSAMS 84
Query: 181 XXXXXVYMEYNTG-KKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TG KK HGQAKSK KDPAKRHHLF+KRF
Sbjct: 85 GASGMVYMEYSTGQKKQHGQAKSKFKDPAKRHHLFKKRF 123
>ref|XP_008788735.1| PREDICTED: DNA repair helicase XPB1 isoform X2 [Phoenix
dactylifera]
ref|XP_017698103.1| PREDICTED: DNA repair helicase XPB1 isoform X1 [Phoenix
dactylifera]
Length = 769
Score = 132 bits (332), Expect = 2e-32
Identities = 68/100 (68%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG+DLS+ +LDEQLDLLSK+LSAGDD VGLEQLEED D +ALQK
Sbjct: 669 PPPDSGADLSYHSLDEQLDLLSKLLSAGDDAVGLEQLEEDQDGMALQKHRRYATSMSTLS 728
Query: 181 XXXXXVYMEYNTGK-KGHGQAKSKPKDPAKRHHLFRKRFQ 297
VYMEYNTGK K GQ KSKPKDP+KRHHLF+KRFQ
Sbjct: 729 GASGMVYMEYNTGKHKQGGQVKSKPKDPSKRHHLFKKRFQ 768
>ref|XP_016500687.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
ref|XP_016500745.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
Length = 351
Score = 126 bits (317), Expect = 9e-32
Identities = 64/98 (65%), Positives = 70/98 (71%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG +LS+ LD+QL LL KVL+AGDD VGLEQL+EDADDIALQK
Sbjct: 253 PPPDSGPELSYHRLDDQLQLLGKVLNAGDDAVGLEQLDEDADDIALQKARRYVGSMSAMS 312
Query: 181 XXXXXVYMEYNTGKKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEYNTGKK G KSKPKDPAKRH LF+KRF
Sbjct: 313 GAKGMVYMEYNTGKKQGGLIKSKPKDPAKRHQLFKKRF 350
>gb|KJB20625.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 497
Score = 127 bits (320), Expect = 3e-31
Identities = 66/101 (65%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G+DLS+ LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K
Sbjct: 396 PPPDAGADLSYYHLDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMS 455
Query: 181 XXXXXVYMEYNTGK---KGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TGK GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 456 GANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRHHLFKKRF 496
>gb|OWM85302.1| hypothetical protein CDL15_Pgr028089 [Punica granatum]
Length = 747
Score = 128 bits (321), Expect = 6e-31
Identities = 65/98 (66%), Positives = 71/98 (72%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG DLSF LDEQL LL KVLSAGDD+VGLEQLEEDADDIAL K
Sbjct: 649 PPPDSGGDLSFHHLDEQLALLGKVLSAGDDMVGLEQLEEDADDIALHKARRSLGSMSAMS 708
Query: 181 XXXXXVYMEYNTGKKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TGKK GQ K KPKDP+KRH+LF+KR+
Sbjct: 709 GANGMVYMEYSTGKKPMGQGKPKPKDPSKRHYLFKKRY 746
>ref|XP_018623264.1| PREDICTED: DNA repair helicase XPB1 [Nicotiana tomentosiformis]
ref|XP_009589972.2| PREDICTED: DNA repair helicase XPB1 [Nicotiana tomentosiformis]
Length = 511
Score = 126 bits (317), Expect = 8e-31
Identities = 64/98 (65%), Positives = 70/98 (71%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG +LS+ LD+QL LL KVL+AGDD VGLEQL+EDADDIALQK
Sbjct: 413 PPPDSGPELSYHRLDDQLQLLGKVLNAGDDAVGLEQLDEDADDIALQKARRYVGSMSAMS 472
Query: 181 XXXXXVYMEYNTGKKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEYNTGKK G KSKPKDPAKRH LF+KRF
Sbjct: 473 GAKGMVYMEYNTGKKQGGLIKSKPKDPAKRHQLFKKRF 510
>gb|KJB20626.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 724
Score = 127 bits (320), Expect = 9e-31
Identities = 66/101 (65%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G+DLS+ LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K
Sbjct: 623 PPPDAGADLSYYHLDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMS 682
Query: 181 XXXXXVYMEYNTGK---KGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TGK GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 683 GANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRHHLFKKRF 723
>gb|KJB20624.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 747
Score = 127 bits (320), Expect = 9e-31
Identities = 66/101 (65%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G+DLS+ LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K
Sbjct: 646 PPPDAGADLSYYHLDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMS 705
Query: 181 XXXXXVYMEYNTGK---KGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TGK GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 706 GANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRHHLFKKRF 746
>ref|XP_010934928.1| PREDICTED: DNA repair helicase XPB1 isoform X2 [Elaeis guineensis]
Length = 769
Score = 127 bits (320), Expect = 9e-31
Identities = 66/102 (64%), Positives = 74/102 (72%), Gaps = 3/102 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G DLS+ +LDEQLDLLSKVL+AGDD VGLEQLEED D +ALQK
Sbjct: 667 PPPDTGVDLSYHSLDEQLDLLSKVLTAGDDAVGLEQLEEDQDGMALQKHRRYATSMSTLS 726
Query: 181 XXXXXVYMEYNTGKK---GHGQAKSKPKDPAKRHHLFRKRFQ 297
VYMEYNTGK G GQ KSKPKDP+KRH+LF+KRFQ
Sbjct: 727 GASGMVYMEYNTGKHKQGGPGQVKSKPKDPSKRHYLFKKRFQ 768
>ref|XP_012471789.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Gossypium
raimondii]
gb|KJB20623.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 770
Score = 127 bits (320), Expect = 9e-31
Identities = 66/101 (65%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G+DLS+ LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K
Sbjct: 669 PPPDAGADLSYYHLDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMS 728
Query: 181 XXXXXVYMEYNTGK---KGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TGK GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 729 GANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRHHLFKKRF 769
>ref|XP_010934926.1| PREDICTED: DNA repair helicase XPB1 isoform X1 [Elaeis guineensis]
Length = 770
Score = 127 bits (320), Expect = 9e-31
Identities = 66/102 (64%), Positives = 74/102 (72%), Gaps = 3/102 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G DLS+ +LDEQLDLLSKVL+AGDD VGLEQLEED D +ALQK
Sbjct: 668 PPPDTGVDLSYHSLDEQLDLLSKVLTAGDDAVGLEQLEEDQDGMALQKHRRYATSMSTLS 727
Query: 181 XXXXXVYMEYNTGKK---GHGQAKSKPKDPAKRHHLFRKRFQ 297
VYMEYNTGK G GQ KSKPKDP+KRH+LF+KRFQ
Sbjct: 728 GASGMVYMEYNTGKHKQGGPGQVKSKPKDPSKRHYLFKKRFQ 769
>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1 [Vitis vinifera]
Length = 771
Score = 127 bits (320), Expect = 9e-31
Identities = 65/101 (64%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG+DLS+ LDEQL LL KVLSAGDD VGLEQL+EDADDIALQK
Sbjct: 670 PPPDSGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMS 729
Query: 181 XXXXXVYMEYNTGKK---GHGQAKSKPKDPAKRHHLFRKRF 294
VYMEYNTG+ G GQ K KPKDP+KRHHLF++RF
Sbjct: 730 GASGMVYMEYNTGRNKHGGQGQIKGKPKDPSKRHHLFKRRF 770
>ref|XP_012471788.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Gossypium
raimondii]
gb|KJB20627.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 796
Score = 127 bits (320), Expect = 9e-31
Identities = 66/101 (65%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G+DLS+ LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K
Sbjct: 695 PPPDAGADLSYYHLDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMS 754
Query: 181 XXXXXVYMEYNTGK---KGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TGK GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 755 GANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRHHLFKKRF 795
>emb|CBI34367.3| unnamed protein product, partial [Vitis vinifera]
Length = 850
Score = 127 bits (320), Expect = 9e-31
Identities = 65/101 (64%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG+DLS+ LDEQL LL KVLSAGDD VGLEQL+EDADDIALQK
Sbjct: 749 PPPDSGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMS 808
Query: 181 XXXXXVYMEYNTGKK---GHGQAKSKPKDPAKRHHLFRKRF 294
VYMEYNTG+ G GQ K KPKDP+KRHHLF++RF
Sbjct: 809 GASGMVYMEYNTGRNKHGGQGQIKGKPKDPSKRHHLFKRRF 849
>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
vesca]
Length = 768
Score = 127 bits (319), Expect = 1e-30
Identities = 66/100 (66%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG+DLS+ LDEQL LLSKVL+AGDD VGLEQL+ED DDIAL K
Sbjct: 668 PPPDSGADLSYHRLDEQLQLLSKVLTAGDDAVGLEQLDEDIDDIALLKSRRFSGSMSAMS 727
Query: 181 XXXXXVYMEYNTGK--KGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TGK G GQ KSKPKDPAKRHHLF+KRF
Sbjct: 728 GADGRVYMEYSTGKNRNGKGQLKSKPKDPAKRHHLFKKRF 767
>ref|XP_023881498.1| general transcription and DNA repair factor IIH helicase subunit
XPB1-like [Quercus suber]
Length = 764
Score = 127 bits (318), Expect = 2e-30
Identities = 63/98 (64%), Positives = 72/98 (73%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPD+G+DLS+ +L +QL LLSKVLSAGDD VGLEQLEEDADDIAL K
Sbjct: 666 PPPDTGADLSYYSLQDQLALLSKVLSAGDDAVGLEQLEEDADDIALHKARRFMGSMSAMS 725
Query: 181 XXXXXVYMEYNTGKKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TG+K GQ K KPKDPAKRHHLF++RF
Sbjct: 726 GANGMVYMEYSTGRKMQGQLKGKPKDPAKRHHLFKRRF 763
>ref|XP_024173476.1| general transcription and DNA repair factor IIH helicase subunit
XPB1-like [Rosa chinensis]
gb|PRQ17628.1| putative DNA helicase chromatin remodeling SNF2 family [Rosa
chinensis]
Length = 768
Score = 127 bits (318), Expect = 2e-30
Identities = 65/100 (65%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 PPPDSGSDLSFDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXX 180
PPPDSG+DLS+ LDEQL LL+KVL+AGDD VGLEQL+ED DDIAL K
Sbjct: 668 PPPDSGADLSYHRLDEQLHLLTKVLTAGDDAVGLEQLDEDVDDIALHKSRRFSGSMSAMS 727
Query: 181 XXXXXVYMEYNTG--KKGHGQAKSKPKDPAKRHHLFRKRF 294
VYMEY+TG K G GQ KSKPKDPAKRHHLF+KRF
Sbjct: 728 GANGMVYMEYSTGKNKNGKGQMKSKPKDPAKRHHLFKKRF 767