BLASTX nr result

ID: Ophiopogon23_contig00023610 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00023610
         (640 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMP00118.1| Actin-related protein, partial [Corchorus capsula...    53   8e-06

>gb|OMP00118.1| Actin-related protein, partial [Corchorus capsularis]
          Length = 96

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 15  FLNTTESYKLYSQSVIASDVKECVCRA 95
           F NTTESYKLYS+SVIASD+KECVCRA
Sbjct: 24  FPNTTESYKLYSKSVIASDIKECVCRA 50


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