BLASTX nr result
ID: Ophiopogon23_contig00023533
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00023533
(615 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009401551.1| PREDICTED: RNA pseudouridine synthase 3, mit... 90 2e-17
gb|OVA19260.1| Pseudouridine synthase [Macleaya cordata] 82 1e-14
ref|XP_010927194.1| PREDICTED: RNA pseudouridine synthase 3, mit... 81 3e-14
ref|XP_008807168.2| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 79 1e-13
ref|XP_021297053.1| RNA pseudouridine synthase 3, mitochondrial ... 79 2e-13
gb|OIW07347.1| hypothetical protein TanjilG_10182 [Lupinus angus... 78 4e-13
ref|XP_019453119.1| PREDICTED: RNA pseudouridine synthase 3, mit... 78 4e-13
ref|XP_007023655.2| PREDICTED: RNA pseudouridine synthase 3, mit... 77 5e-13
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ... 77 5e-13
gb|KVH97123.1| hypothetical protein Ccrd_000779 [Cynara carduncu... 72 7e-13
ref|XP_020110891.1| RNA pseudouridine synthase 3, mitochondrial ... 77 9e-13
ref|XP_020110890.1| RNA pseudouridine synthase 3, mitochondrial ... 77 1e-12
ref|XP_020110889.1| RNA pseudouridine synthase 3, mitochondrial ... 77 1e-12
gb|OMO76072.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corcho... 76 1e-12
gb|PKA57873.1| RNA pseudouridine synthase 3, mitochondrial [Apos... 76 1e-12
ref|XP_018815545.1| PREDICTED: RNA pseudouridine synthase 3, mit... 75 2e-12
gb|OAY64420.1| RNA pseudouridine synthase 3, mitochondrial [Anan... 75 2e-12
gb|OMO65550.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corcho... 75 3e-12
ref|XP_013448024.1| RNA pseudouridine synthase [Medicago truncat... 74 6e-12
ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mit... 74 8e-12
>ref|XP_009401551.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Musa
acuminata subsp. malaccensis]
Length = 481
Score = 90.1 bits (222), Expect = 2e-17
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +2
Query: 377 PSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSS-PN 553
P W+ L +VRW +R++PP A AE VIRVSNN+ARLG PK PK RQLLSLP FPS+ +
Sbjct: 9 PPWVVLRVVRWLSRIAPPSPATAEPVIRVSNNVARLGKPKEGPKPRQLLSLPPFPSTGTD 68
Query: 554 LLPGRKPGPAAAEPGRSARV 613
LPGRK PAA+ G+ RV
Sbjct: 69 PLPGRKKDPAAS--GQPRRV 86
>gb|OVA19260.1| Pseudouridine synthase [Macleaya cordata]
Length = 476
Score = 82.0 bits (201), Expect = 1e-14
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +2
Query: 401 VRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLPGRKPGP 580
VR F+R SPPP APA VIRVSNNIA LG PK PK RQLLSLP FP+ LPG+ P
Sbjct: 14 VRHFSRASPPPPAPASPVIRVSNNIAHLGCPKDGPKPRQLLSLPAFPARHQPLPGKNP-- 71
Query: 581 AAAEPGRSARV 613
+ PG+ AR+
Sbjct: 72 -VSMPGQPARI 81
>ref|XP_010927194.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Elaeis
guineensis]
Length = 483
Score = 80.9 bits (198), Expect = 3e-14
Identities = 51/89 (57%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +2
Query: 350 MLRTRRRCLPSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSL 529
MLR RR C L VR +R++PP AE VIRVSNN+ARLG PK PK RQLLSL
Sbjct: 1 MLR-RRYCPRPPALLRAVRHLSRLAPPRPVTAEPVIRVSNNVARLGEPKEGPKPRQLLSL 59
Query: 530 PTFPSS-PNLLPGRKPGPAAAEPGRSARV 613
P FPSS N LPGRK P AA+P + R+
Sbjct: 60 PPFPSSHTNPLPGRKRDP-AADPSKPRRI 87
>ref|XP_008807168.2| PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine synthase 3,
mitochondrial [Phoenix dactylifera]
Length = 482
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/84 (55%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 365 RRCLPSW-LHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFP 541
RRC P L VR +R++PP A AE VIRVSNN+ARLG PK PK RQLLSLP P
Sbjct: 4 RRCCPRPPALLRTVRHLSRLAPPRPATAEPVIRVSNNVARLGEPKEGPKPRQLLSLPPSP 63
Query: 542 SSPNLLPGRKPGPAAAEPGRSARV 613
N LPGRK P AA+P + R+
Sbjct: 64 PLTNPLPGRKRDP-AADPSKPRRI 86
>ref|XP_021297053.1| RNA pseudouridine synthase 3, mitochondrial [Herrania umbratica]
Length = 471
Score = 78.6 bits (192), Expect = 2e-13
Identities = 40/65 (61%), Positives = 48/65 (73%)
Frame = +2
Query: 392 LPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLPGRK 571
L +VR ++RV+PPP A A+ V+RVSNN+A LG PK PK RQLLSLP FP SP LPG+
Sbjct: 11 LSLVRHYSRVAPPPPAYADPVLRVSNNVAYLGAPKQGPKPRQLLSLPPFPGSP--LPGKN 68
Query: 572 PGPAA 586
PG A
Sbjct: 69 PGGTA 73
>gb|OIW07347.1| hypothetical protein TanjilG_10182 [Lupinus angustifolius]
Length = 476
Score = 77.8 bits (190), Expect = 4e-13
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +2
Query: 380 SWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLL 559
+WL L +VR ++R+ PP P E VIRVSNNIARL PK PK RQLLSLP FP P L
Sbjct: 12 TWLLLFVVRHYSRIRPPKAVPVEKVIRVSNNIARLDAPKERPKPRQLLSLPPFPRDP--L 69
Query: 560 PGRKPGPAAAEPGRSARV 613
PG+ +P R V
Sbjct: 70 PGKNSSSVPGQPDRVTAV 87
>ref|XP_019453119.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Lupinus
angustifolius]
Length = 493
Score = 77.8 bits (190), Expect = 4e-13
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +2
Query: 380 SWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLL 559
+WL L +VR ++R+ PP P E VIRVSNNIARL PK PK RQLLSLP FP P L
Sbjct: 25 TWLLLFVVRHYSRIRPPKAVPVEKVIRVSNNIARLDAPKERPKPRQLLSLPPFPRDP--L 82
Query: 560 PGRKPGPAAAEPGRSARV 613
PG+ +P R V
Sbjct: 83 PGKNSSSVPGQPDRVTAV 100
>ref|XP_007023655.2| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Theobroma
cacao]
Length = 471
Score = 77.4 bits (189), Expect = 5e-13
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = +2
Query: 383 WLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLP 562
W L +VR ++RV+PPP A A+ V+RVSN++A LG PK PK RQLLSLP FP P LP
Sbjct: 8 WQFLSLVRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGYP--LP 65
Query: 563 GRKPGPAA 586
G+ PG A
Sbjct: 66 GKNPGGTA 73
>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 471
Score = 77.4 bits (189), Expect = 5e-13
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = +2
Query: 383 WLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLP 562
W L +VR ++RV+PPP A A+ V+RVSN++A LG PK PK RQLLSLP FP P LP
Sbjct: 8 WQFLSLVRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGYP--LP 65
Query: 563 GRKPGPAA 586
G+ PG A
Sbjct: 66 GKNPGGTA 73
>gb|KVH97123.1| hypothetical protein Ccrd_000779 [Cynara cardunculus var. scolymus]
Length = 108
Score = 72.0 bits (175), Expect = 7e-13
Identities = 41/74 (55%), Positives = 47/74 (63%)
Frame = +2
Query: 359 TRRRCLPSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTF 538
+RR+C+P R F+RVSPPP +E VIRVSNNI LG PK K RQLLSLP F
Sbjct: 6 SRRQCMPF-----TXRHFSRVSPPPPDCSESVIRVSNNITHLGRPKAGYKPRQLLSLPPF 60
Query: 539 PSSPNLLPGRKPGP 580
PS P LPG+ P
Sbjct: 61 PSHP--LPGKNVSP 72
>ref|XP_020110891.1| RNA pseudouridine synthase 3, mitochondrial isoform X3 [Ananas
comosus]
Length = 485
Score = 76.6 bits (187), Expect = 9e-13
Identities = 47/85 (55%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = +2
Query: 350 MLRTRRRCLPSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSL 529
MLR R C P+ L L R +R++PPP A AE VIRVSNN+ARLG K PK RQLLSL
Sbjct: 1 MLRRCRLCPPAAL-LAAARSLSRLAPPPPARAEPVIRVSNNVARLGEAKEGPKPRQLLSL 59
Query: 530 PTFPSSPNL-------LPGRKPGPA 583
P FPSS + LPGRK P+
Sbjct: 60 PRFPSSSSSSCDRGDPLPGRKRDPS 84
>ref|XP_020110890.1| RNA pseudouridine synthase 3, mitochondrial isoform X2 [Ananas
comosus]
Length = 511
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/85 (55%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = +2
Query: 350 MLRTRRRCLPSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSL 529
MLR R C P+ L L R +R++PPP A AE VIRVSNN+ARLG K PK RQLLSL
Sbjct: 1 MLRRCRLCPPAAL-LAAARSLSRLAPPPPARAEPVIRVSNNVARLGEAKEGPKPRQLLSL 59
Query: 530 PTFPSSPNL-------LPGRKPGPA 583
P FPSS + LPGRK P+
Sbjct: 60 PRFPSSSSSSCDRGDPLPGRKRDPS 84
>ref|XP_020110889.1| RNA pseudouridine synthase 3, mitochondrial isoform X1 [Ananas
comosus]
Length = 518
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/85 (55%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = +2
Query: 350 MLRTRRRCLPSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSL 529
MLR R C P+ L L R +R++PPP A AE VIRVSNN+ARLG K PK RQLLSL
Sbjct: 1 MLRRCRLCPPAAL-LAAARSLSRLAPPPPARAEPVIRVSNNVARLGEAKEGPKPRQLLSL 59
Query: 530 PTFPSSPNL-------LPGRKPGPA 583
P FPSS + LPGRK P+
Sbjct: 60 PRFPSSSSSSCDRGDPLPGRKRDPS 84
>gb|OMO76072.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus capsularis]
Length = 470
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +2
Query: 392 LPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLPGRK 571
L +VR ++RV+PPP A A+ VIRVSNN+A LGPPK PK RQLLSLP FP P LPG+
Sbjct: 11 LSLVRHYSRVAPPPPALADPVIRVSNNVAYLGPPKQGPKPRQLLSLPPFPGCP--LPGKD 68
Query: 572 PG 577
G
Sbjct: 69 SG 70
>gb|PKA57873.1| RNA pseudouridine synthase 3, mitochondrial [Apostasia shenzhenica]
Length = 491
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +2
Query: 398 IVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSS-PNLLPGRK 571
+ R +RV+PPPD+ AE VIRVSNN+ARLGPPK PK RQ LSLP FPS+ + LPGRK
Sbjct: 21 LFRQLSRVAPPPDSVAEPVIRVSNNVARLGPPKEGPKPRQFLSLPPFPSAGVDPLPGRK 79
>ref|XP_018815545.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
[Juglans regia]
Length = 471
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/70 (60%), Positives = 50/70 (71%)
Frame = +2
Query: 392 LPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLPGRK 571
L I+R ++R+SPPP A AE VIRVSNNIA+LG PK PK RQLLSLP FP+ P LP +
Sbjct: 9 LAIIRHYSRISPPPPAYAEPVIRVSNNIAQLGGPKEGPKPRQLLSLPPFPAHP--LPVK- 65
Query: 572 PGPAAAEPGR 601
A+ PGR
Sbjct: 66 -NSASGHPGR 74
>gb|OAY64420.1| RNA pseudouridine synthase 3, mitochondrial [Ananas comosus]
Length = 503
Score = 75.5 bits (184), Expect = 2e-12
Identities = 46/85 (54%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Frame = +2
Query: 350 MLRTRRRCLPSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSL 529
MLR C P+ L L R +R++PPP A AE VIRVSNN+ARLG K PK RQLLSL
Sbjct: 1 MLRRCHLCTPAAL-LAAARSLSRLAPPPPARAEPVIRVSNNVARLGEAKEGPKPRQLLSL 59
Query: 530 PTFPSSPNL-------LPGRKPGPA 583
P FPSS + LPGRK P+
Sbjct: 60 PRFPSSSSSSCDRGDPLPGRKRDPS 84
>gb|OMO65550.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus olitorius]
Length = 500
Score = 75.1 bits (183), Expect = 3e-12
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +2
Query: 392 LPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLPGRK 571
L +VR ++RV+PPP A A+ VIRVSNN+A LGPPK PK RQLLSLP FP P LPG+
Sbjct: 11 LSLVRHYSRVAPPPPAFADPVIRVSNNVAYLGPPKQCPKPRQLLSLPPFPGCP--LPGKD 68
Query: 572 PG 577
G
Sbjct: 69 SG 70
>ref|XP_013448024.1| RNA pseudouridine synthase [Medicago truncatula]
gb|KEH22051.1| RNA pseudouridine synthase [Medicago truncatula]
Length = 534
Score = 74.3 bits (181), Expect = 6e-12
Identities = 46/97 (47%), Positives = 55/97 (56%)
Frame = +2
Query: 323 SMTSPNLAPMLRTRRRCLPSWLHLPIVRWFARVSPPPDAPAELVIRVSNNIARLGPPKGD 502
S+TS + + C SWL +VR+++RV PP + VIRVSNNIARL PK
Sbjct: 50 SLTSFQMLKRMSNNNGC--SWLS-SLVRYYSRVRPPRPVSVDKVIRVSNNIARLDVPKDG 106
Query: 503 PKSRQLLSLPTFPSSPNLLPGRKPGPAAAEPGRSARV 613
PK RQLLSLP FPS P LPG+ A E R V
Sbjct: 107 PKPRQLLSLPPFPSHP--LPGKNSTSAPGERDRVTAV 141
>ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
[Nelumbo nucifera]
Length = 474
Score = 73.9 bits (180), Expect = 8e-12
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +2
Query: 401 VRWFARVSPPPDAPAELVIRVSNNIARLGPPKGDPKSRQLLSLPTFPSSPNLLPGRKPGP 580
VR ++RVSPP A A VIRVSNNIARLG PK DPK RQLLSLP FP P LPG+
Sbjct: 14 VRHYSRVSPPSPARATSVIRVSNNIARLGCPKEDPKPRQLLSLPPFPGHP--LPGKS--- 68
Query: 581 AAAEPGRSARV 613
+ + G+SA V
Sbjct: 69 SVSVAGQSAHV 79