BLASTX nr result

ID: Ophiopogon23_contig00022623 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00022623
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260161.1| zinc finger CCCH domain-containing protein 3...    89   2e-17
gb|ONK71084.1| uncharacterized protein A4U43_C04F4560 [Asparagus...    89   2e-17

>ref|XP_020260161.1| zinc finger CCCH domain-containing protein 32 [Asparagus
           officinalis]
          Length = 651

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 57/152 (37%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
 Frame = +3

Query: 3   GEWCPFMHVPHPASNQ--DQSTNGPHLEGNSDPQQLINRPRAAGNHVQQQVAKVXXXXXX 176
           G+ C FMH PHPASN+  DQSTNGPH   NSDP QL N     GN+V QQ AKV      
Sbjct: 119 GDMCSFMHGPHPASNRVTDQSTNGPHQAANSDPHQLTNGSHLVGNNVVQQAAKVSPSLTG 178

Query: 177 XXXXVPWGIKECDXXXXXXXXXXXXNKPVEFPYSSAKSAHRAGGPPVMALXXXXXXXXXX 356
               + WG+KEC+            +K  E P             PV             
Sbjct: 179 TSQMISWGLKECN-----------ASKKAEGPVKGQLRNRSLSPYPV------------- 214

Query: 357 XXXXXXXXXXTVAPVSSDNSPGMPHRHQPQAA 452
                     T+APVSS+NSP M   H  Q A
Sbjct: 215 -DYERPRFQPTIAPVSSENSPTMSSHHPLQPA 245


>gb|ONK71084.1| uncharacterized protein A4U43_C04F4560 [Asparagus officinalis]
          Length = 664

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 57/152 (37%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
 Frame = +3

Query: 3   GEWCPFMHVPHPASNQ--DQSTNGPHLEGNSDPQQLINRPRAAGNHVQQQVAKVXXXXXX 176
           G+ C FMH PHPASN+  DQSTNGPH   NSDP QL N     GN+V QQ AKV      
Sbjct: 132 GDMCSFMHGPHPASNRVTDQSTNGPHQAANSDPHQLTNGSHLVGNNVVQQAAKVSPSLTG 191

Query: 177 XXXXVPWGIKECDXXXXXXXXXXXXNKPVEFPYSSAKSAHRAGGPPVMALXXXXXXXXXX 356
               + WG+KEC+            +K  E P             PV             
Sbjct: 192 TSQMISWGLKECN-----------ASKKAEGPVKGQLRNRSLSPYPV------------- 227

Query: 357 XXXXXXXXXXTVAPVSSDNSPGMPHRHQPQAA 452
                     T+APVSS+NSP M   H  Q A
Sbjct: 228 -DYERPRFQPTIAPVSSENSPTMSSHHPLQPA 258


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