BLASTX nr result

ID: Ophiopogon23_contig00021838 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00021838
         (472 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253694.1| zinc finger protein GIS-like [Asparagus offi...    77   6e-15

>ref|XP_020253694.1| zinc finger protein GIS-like [Asparagus officinalis]
          Length = 148

 Score = 77.0 bits (188), Expect = 6e-15
 Identities = 57/145 (39%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
 Frame = -3

Query: 470 RKEREVVNRLHQDPSSFFTICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQTQNVYHPS 291
           R+ER++VN+LHQDP+SF ++                               Q Q  Y P 
Sbjct: 37  RRERDLVNKLHQDPNSFISL-----------------------------KNQGQVSYCPP 67

Query: 290 STLSPDLPYYQSYYRH-HPNQFNNI-NHETSRADVGXXXXXXXXXSRLENGGGSVLRTDE 117
           S LS  + Y Q+YY H  P QFNNI +   S  +VG             NGG S  R +E
Sbjct: 68  SNLSLGVSYCQNYYHHPQPYQFNNIISQGASEVNVGPSSRNYITGPSFGNGGESDPR-NE 126

Query: 116 TYWKLPNRAGLDDDKENEIDLTLRL 42
            YW+L NRA LD   ENEIDLTLRL
Sbjct: 127 KYWRLRNRAELD---ENEIDLTLRL 148


Top