BLASTX nr result

ID: Ophiopogon23_contig00020540 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00020540
         (643 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [A...   103   2e-23
ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [A...    58   1e-06

>ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [Asparagus officinalis]
 gb|ONK58841.1| uncharacterized protein A4U43_C08F290 [Asparagus officinalis]
          Length = 224

 Score =  103 bits (256), Expect = 2e-23
 Identities = 63/127 (49%), Positives = 77/127 (60%), Gaps = 6/127 (4%)
 Frame = -1

Query: 643 LLSSFESLKNXXXXXXXXXXXXXXXLDRPSTEGRGKD-----VQIRPNLLLAVETDTRQI 479
           LLS+FESLK+               L++P  E RG +        RPNL+L  +T+ R +
Sbjct: 103 LLSNFESLKHEKQLLAKQLQKLAELLEKPMEE-RGNESDQEKADQRPNLMLTEKTEMRLM 161

Query: 478 SSDD-EENQYRKYSEKETEDLFGEPPPIGGLLVPSEQQQQFCFRQPSWPADQSCATSQWW 302
           SSDD EEN++ + SEKE +   G  PP GG LVPSEQQ  FCF QPSWP DQ+CA SQWW
Sbjct: 162 SSDDDEENRHTRCSEKEKDFFSG--PPTGGSLVPSEQQ--FCFHQPSWPTDQACANSQWW 217

Query: 301 EFDR*NE 281
           EF   NE
Sbjct: 218 EFWPMNE 224


>ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [Ananas comosus]
 gb|OAY67743.1| Homeobox-leucine zipper protein HOX6 [Ananas comosus]
          Length = 234

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
 Frame = -1

Query: 643 LLSSFESLKNXXXXXXXXXXXXXXXLDRPSTEGRGK------------DVQIRPNLLLAV 500
           LL+SF+SLK                LD+P  EGR +                RPN  +  
Sbjct: 104 LLASFDSLKKEKHMLLKQLQKLNGLLDKPQ-EGRSRCYGDSENADLNGATDKRPNFQMKE 162

Query: 499 ETDTRQIS-SDDEENQYRKYSEKETEDLFGEPPPIGGLLVPSEQQQQFCFRQPSWPADQS 323
           E+D R +  SD+E+ ++     ++  +L+         L  SE + QF F Q SWP+DQS
Sbjct: 163 ESDARVVPYSDEEDKKFPCLISEDEAELYTVQQQACSTLT-SEVEDQFGF-QTSWPSDQS 220

Query: 322 CATSQWWEFDR*NE 281
           C ++QWWEF   NE
Sbjct: 221 CTSTQWWEFWPMNE 234


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