BLASTX nr result

ID: Ophiopogon23_contig00019172 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00019172
         (559 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263628.1| DNA excision repair protein ERCC-1 [Asparagu...    61   1e-07

>ref|XP_020263628.1| DNA excision repair protein ERCC-1 [Asparagus officinalis]
 gb|ONK73660.1| uncharacterized protein A4U43_C04F33940 [Asparagus officinalis]
          Length = 381

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = -3

Query: 515 KKEHKPNVKSALSAAFAKYADRVQKPEGRSSPPEMGEGSNSSAMASK 375
           +KEH  NVKSALSAAFAKYA+RV+KP+ +SS PE  EGS+S   A K
Sbjct: 335 RKEHTLNVKSALSAAFAKYAERVRKPDEKSSSPEKVEGSSSVTAAPK 381


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