BLASTX nr result
ID: Ophiopogon23_contig00018458
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00018458
(380 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018675717.1| PREDICTED: RNA pseudouridine synthase 2, chl... 84 2e-16
ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chl... 84 2e-16
ref|XP_008806148.1| PREDICTED: RNA pseudouridine synthase 2, chl... 78 2e-14
ref|XP_017701148.1| PREDICTED: RNA pseudouridine synthase 2, chl... 78 2e-14
ref|XP_008806147.1| PREDICTED: RNA pseudouridine synthase 2, chl... 78 2e-14
ref|XP_008806145.1| PREDICTED: RNA pseudouridine synthase 2, chl... 78 3e-14
ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chl... 78 3e-14
ref|XP_020113504.1| RNA pseudouridine synthase 2, chloroplastic ... 75 2e-13
ref|XP_020113503.1| RNA pseudouridine synthase 2, chloroplastic ... 75 2e-13
ref|XP_011034961.1| PREDICTED: RNA pseudouridine synthase 2, chl... 75 4e-13
ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 75 4e-13
ref|XP_012078835.1| RNA pseudouridine synthase 2, chloroplastic ... 74 1e-12
ref|XP_019709777.1| PREDICTED: RNA pseudouridine synthase 2, chl... 73 1e-12
ref|XP_019709776.1| PREDICTED: RNA pseudouridine synthase 2, chl... 73 1e-12
ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chl... 73 2e-12
gb|PKA60768.1| RNA pseudouridine synthase 2, chloroplastic [Apos... 72 3e-12
ref|NP_177732.2| Pseudouridine synthase family protein [Arabidop... 71 6e-12
ref|XP_021902498.1| RNA pseudouridine synthase 2, chloroplastic ... 71 7e-12
gb|OAP15065.1| hypothetical protein AXX17_AT1G70490 [Arabidopsis... 71 1e-11
ref|XP_010471753.1| PREDICTED: RNA pseudouridine synthase 2, chl... 71 1e-11
>ref|XP_018675717.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Musa acuminata subsp. malaccensis]
Length = 403
Score = 84.0 bits (206), Expect = 2e-16
Identities = 51/109 (46%), Positives = 61/109 (55%), Gaps = 14/109 (12%)
Frame = +2
Query: 95 TMLSLTAGSTTSPFFFLLKLRRRNPXXXXXXXXXXXXXXX--------------RVNHTG 232
TML L + +S F L L RRNP RVNH G
Sbjct: 3 TMLPLLPAAASSSSFSSLNLLRRNPNRSRVPPRALQCSSYPDLDPESPPPRGEIRVNHAG 62
Query: 233 LRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVH 379
+R E V+ G+ K R+DSWI+SRI+GVSRARI+SSIRSGLVAVNG TV+
Sbjct: 63 VRLEERVEVGAEKTRIDSWISSRIRGVSRARIQSSIRSGLVAVNGRTVN 111
>ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Musa acuminata subsp. malaccensis]
ref|XP_009382728.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Musa acuminata subsp. malaccensis]
Length = 440
Score = 84.0 bits (206), Expect = 2e-16
Identities = 51/109 (46%), Positives = 61/109 (55%), Gaps = 14/109 (12%)
Frame = +2
Query: 95 TMLSLTAGSTTSPFFFLLKLRRRNPXXXXXXXXXXXXXXX--------------RVNHTG 232
TML L + +S F L L RRNP RVNH G
Sbjct: 3 TMLPLLPAAASSSSFSSLNLLRRNPNRSRVPPRALQCSSYPDLDPESPPPRGEIRVNHAG 62
Query: 233 LRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVH 379
+R E V+ G+ K R+DSWI+SRI+GVSRARI+SSIRSGLVAVNG TV+
Sbjct: 63 VRLEERVEVGAEKTRIDSWISSRIRGVSRARIQSSIRSGLVAVNGRTVN 111
>ref|XP_008806148.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X5
[Phoenix dactylifera]
Length = 349
Score = 78.2 bits (191), Expect = 2e-14
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
R NH GLR E SV+ G+ K R+DSWI+SRIQGVSRARI+SSIRSG V VNG TV
Sbjct: 60 RGNHAGLRLEESVEIGAEKTRLDSWISSRIQGVSRARIQSSIRSGFVVVNGRTV 113
>ref|XP_017701148.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X4
[Phoenix dactylifera]
Length = 367
Score = 78.2 bits (191), Expect = 2e-14
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
R NH GLR E SV+ G+ K R+DSWI+SRIQGVSRARI+SSIRSG V VNG TV
Sbjct: 60 RGNHAGLRLEESVEIGAEKTRLDSWISSRIQGVSRARIQSSIRSGFVVVNGRTV 113
>ref|XP_008806147.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Phoenix dactylifera]
Length = 391
Score = 78.2 bits (191), Expect = 2e-14
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
R NH GLR E SV+ G+ K R+DSWI+SRIQGVSRARI+SSIRSG V VNG TV
Sbjct: 60 RGNHAGLRLEESVEIGAEKTRLDSWISSRIQGVSRARIQSSIRSGFVVVNGRTV 113
>ref|XP_008806145.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Phoenix dactylifera]
Length = 436
Score = 78.2 bits (191), Expect = 3e-14
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
R NH GLR E SV+ G+ K R+DSWI+SRIQGVSRARI+SSIRSG V VNG TV
Sbjct: 60 RGNHAGLRLEESVEIGAEKTRLDSWISSRIQGVSRARIQSSIRSGFVVVNGRTV 113
>ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Phoenix dactylifera]
Length = 439
Score = 78.2 bits (191), Expect = 3e-14
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
R NH GLR E SV+ G+ K R+DSWI+SRIQGVSRARI+SSIRSG V VNG TV
Sbjct: 60 RGNHAGLRLEESVEIGAEKTRLDSWISSRIQGVSRARIQSSIRSGFVVVNGRTV 113
>ref|XP_020113504.1| RNA pseudouridine synthase 2, chloroplastic isoform X2 [Ananas
comosus]
Length = 333
Score = 75.5 bits (184), Expect = 2e-13
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Frame = +2
Query: 98 MLSLTAGSTTSPFFFLLKLRRRNPXXXXXXXXXXXXXXX---------RVNHTGLRFEAS 250
MLSL + S++S L RRNP R +H G R E +
Sbjct: 1 MLSLASSSSSSSL--ALSSLRRNPRYRVLRAMCSSSALDPDPNPSPRLRSSHAGARLEEA 58
Query: 251 VDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
V+ GS ++R+D+W+ASRI+GVSRARI+SSIRSGLVAVNG TV
Sbjct: 59 VEVGSGRSRLDAWLASRIRGVSRARIQSSIRSGLVAVNGRTV 100
>ref|XP_020113503.1| RNA pseudouridine synthase 2, chloroplastic isoform X1 [Ananas
comosus]
gb|OAY68405.1| RNA pseudouridine synthase 2, chloroplastic [Ananas comosus]
Length = 430
Score = 75.5 bits (184), Expect = 2e-13
Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Frame = +2
Query: 98 MLSLTAGSTTSPFFFLLKLRRRNPXXXXXXXXXXXXXXX---------RVNHTGLRFEAS 250
MLSL + S++S L RRNP R +H G R E +
Sbjct: 1 MLSLASSSSSSSL--ALSSLRRNPRYRVLRAMCSSSALDPDPNPSPRLRSSHAGARLEEA 58
Query: 251 VDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
V+ GS ++R+D+W+ASRI+GVSRARI+SSIRSGLVAVNG TV
Sbjct: 59 VEVGSGRSRLDAWLASRIRGVSRARIQSSIRSGLVAVNGRTV 100
>ref|XP_011034961.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Populus
euphratica]
Length = 416
Score = 74.7 bits (182), Expect = 4e-13
Identities = 33/51 (64%), Positives = 46/51 (90%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNG 367
R+N++G++ E SVDS S K+R+DSWI+SRI G+SRAR++SSI+SGLV+VNG
Sbjct: 46 RINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNG 96
>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
gb|PNT47273.1| hypothetical protein POPTR_002G016800v3 [Populus trichocarpa]
Length = 444
Score = 74.7 bits (182), Expect = 4e-13
Identities = 33/51 (64%), Positives = 46/51 (90%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNG 367
R+N++G++ E SVDS S K+R+DSWI+SRI G+SRAR++SSI+SGLV+VNG
Sbjct: 75 RINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNG 125
>ref|XP_012078835.1| RNA pseudouridine synthase 2, chloroplastic [Jatropha curcas]
Length = 426
Score = 73.6 bits (179), Expect = 1e-12
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
R+N+ GLR E +V++ S K R+DSWI+SRI G+SRAR++SSI+SGLVAVNG V
Sbjct: 60 RINYAGLRLEETVEAKSGKLRLDSWISSRISGISRARVQSSIKSGLVAVNGRVV 113
>ref|XP_019709777.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Elaeis guineensis]
ref|XP_019709778.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Elaeis guineensis]
Length = 343
Score = 73.2 bits (178), Expect = 1e-12
Identities = 49/108 (45%), Positives = 58/108 (53%), Gaps = 16/108 (14%)
Frame = +2
Query: 101 LSLTAGSTTSPFFFLLKLRRRNPXXXXXXXXXXXXXXX-------------RV---NHTG 232
LSL A ++S F L L RR+P RV NH G
Sbjct: 16 LSLPAAGSSSQLSFSLDLLRRDPRDRVSKALCSSTSTSSRDSNPEPFQRQQRVITGNHAG 75
Query: 233 LRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
LR E V+ G+ K R+DSWI+SRI+ VSRARI+SSIRSGLV VNG TV
Sbjct: 76 LRLEERVEIGAEKTRLDSWISSRIETVSRARIQSSIRSGLVTVNGRTV 123
>ref|XP_019709776.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Elaeis guineensis]
Length = 357
Score = 73.2 bits (178), Expect = 1e-12
Identities = 49/108 (45%), Positives = 58/108 (53%), Gaps = 16/108 (14%)
Frame = +2
Query: 101 LSLTAGSTTSPFFFLLKLRRRNPXXXXXXXXXXXXXXX-------------RV---NHTG 232
LSL A ++S F L L RR+P RV NH G
Sbjct: 16 LSLPAAGSSSQLSFSLDLLRRDPRDRVSKALCSSTSTSSRDSNPEPFQRQQRVITGNHAG 75
Query: 233 LRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
LR E V+ G+ K R+DSWI+SRI+ VSRARI+SSIRSGLV VNG TV
Sbjct: 76 LRLEERVEIGAEKTRLDSWISSRIETVSRARIQSSIRSGLVTVNGRTV 123
>ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Elaeis guineensis]
Length = 449
Score = 73.2 bits (178), Expect = 2e-12
Identities = 49/108 (45%), Positives = 58/108 (53%), Gaps = 16/108 (14%)
Frame = +2
Query: 101 LSLTAGSTTSPFFFLLKLRRRNPXXXXXXXXXXXXXXX-------------RV---NHTG 232
LSL A ++S F L L RR+P RV NH G
Sbjct: 16 LSLPAAGSSSQLSFSLDLLRRDPRDRVSKALCSSTSTSSRDSNPEPFQRQQRVITGNHAG 75
Query: 233 LRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
LR E V+ G+ K R+DSWI+SRI+ VSRARI+SSIRSGLV VNG TV
Sbjct: 76 LRLEERVEIGAEKTRLDSWISSRIETVSRARIQSSIRSGLVTVNGRTV 123
>gb|PKA60768.1| RNA pseudouridine synthase 2, chloroplastic [Apostasia shenzhenica]
Length = 470
Score = 72.4 bits (176), Expect = 3e-12
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +2
Query: 221 NHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVH 379
N +G+R E V+ GS K R+DSWI++RI GVSRAR++SSIRSGLV VNG +H
Sbjct: 76 NFSGIRLEEMVEIGSEKVRIDSWISTRISGVSRARVQSSIRSGLVTVNGRVIH 128
>ref|NP_177732.2| Pseudouridine synthase family protein [Arabidopsis thaliana]
gb|AEE35789.1| Pseudouridine synthase family protein [Arabidopsis thaliana]
Length = 313
Score = 70.9 bits (172), Expect = 6e-12
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
RVN+ GLR E VD+ K R+DSWI+SRI GVSRAR++SSIR GLV VNG V
Sbjct: 63 RVNNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVV 116
>ref|XP_021902498.1| RNA pseudouridine synthase 2, chloroplastic [Carica papaya]
Length = 436
Score = 71.2 bits (173), Expect = 7e-12
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNG 367
R N+ GL+ E +VD S K R+DSWI SRIQG+SRAR++SSIRSGLV+VNG
Sbjct: 65 RTNYGGLKLEETVDIRSGKLRLDSWIFSRIQGISRARVQSSIRSGLVSVNG 115
>gb|OAP15065.1| hypothetical protein AXX17_AT1G70490 [Arabidopsis thaliana]
Length = 430
Score = 70.9 bits (172), Expect = 1e-11
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITV 376
RVN+ GLR E VD+ K R+DSWI+SRI GVSRAR++SSIR GLV VNG V
Sbjct: 63 RVNNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVV 116
>ref|XP_010471753.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
X2 [Camelina sativa]
Length = 430
Score = 70.9 bits (172), Expect = 1e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +2
Query: 215 RVNHTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNG 367
RVN+ GLR E +VDS K R+DSWI+SR+ GVSRAR++SSIR GLV VNG
Sbjct: 60 RVNNAGLRIEETVDSVQGKIRIDSWISSRVIGVSRARVQSSIRLGLVTVNG 110